##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920884_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3075822 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.47431580891222 31.0 28.0 33.0 20.0 34.0 2 28.497353878085274 31.0 28.0 33.0 16.0 34.0 3 28.572579947734297 31.0 28.0 34.0 18.0 34.0 4 32.031235552642514 35.0 32.0 37.0 22.0 37.0 5 31.99677517099494 35.0 32.0 37.0 22.0 37.0 6 32.124169734139365 35.0 32.0 37.0 23.0 37.0 7 31.95493497348026 35.0 32.0 37.0 21.0 37.0 8 31.892186543954754 35.0 32.0 37.0 19.0 37.0 9 33.15454762986935 37.0 33.0 39.0 19.0 39.0 10-11 32.956317368170204 37.0 32.0 39.0 18.0 39.0 12-13 32.78878800528769 37.0 32.0 39.0 17.0 39.0 14-15 33.53723134823797 38.0 32.0 40.0 17.0 41.0 16-17 33.423848161564614 38.0 32.0 40.0 17.0 41.0 18-19 33.30911070276498 38.0 32.0 40.0 17.0 41.0 20-21 33.221902795415346 38.0 32.0 40.0 16.0 41.0 22-23 32.99522095231779 38.0 32.0 40.0 11.0 41.0 24-25 32.80853898567602 38.0 32.0 40.0 10.0 41.0 26-27 32.83777003350649 38.0 32.0 40.0 10.0 41.0 28-29 32.684766381149494 38.0 31.0 40.0 9.5 41.0 30-31 32.44313438814079 37.5 31.0 40.0 9.0 41.0 32-33 32.20078908987581 37.0 30.5 40.0 8.0 41.0 34-35 31.87695110445273 37.0 30.0 40.0 5.0 41.0 36-37 31.579040172025557 37.0 30.0 40.0 2.0 41.0 38-39 31.380451957232893 37.0 30.0 40.0 2.0 41.0 40-41 31.187699255678645 37.0 30.0 40.0 2.0 41.0 42-43 30.955041449082554 36.0 29.5 40.0 2.0 41.0 44-45 30.671372725729903 36.0 28.5 39.0 2.0 41.0 46-47 30.417285363067172 36.0 28.0 39.0 2.0 40.0 48-49 30.122625431510667 35.5 27.5 39.0 2.0 40.0 50-51 28.979830432320206 34.0 25.5 38.0 2.0 39.5 52-53 29.434560094829934 34.5 27.5 38.5 2.0 39.5 54-55 30.088254456857385 35.5 28.0 39.0 2.0 40.0 56-57 30.03900892184268 35.5 28.0 39.0 2.0 41.0 58-59 29.797449429778446 35.0 28.0 39.0 2.0 40.0 60-61 29.4671022900545 35.0 27.0 39.0 2.0 40.0 62-63 29.082445115484575 34.5 26.0 38.5 2.0 40.0 64-65 28.664857556776695 34.0 26.0 38.0 2.0 40.0 66-67 28.275082400737105 34.0 26.0 37.5 2.0 40.0 68-69 27.83026813645263 34.0 25.0 37.0 2.0 39.5 70-71 27.498246485004657 34.0 24.5 36.5 2.0 39.0 72-73 27.035893819603345 33.0 23.5 36.0 2.0 39.0 74-75 26.598218947650416 33.0 22.0 35.5 2.0 38.5 76-77 26.187695841957044 32.5 21.5 35.0 2.0 37.5 78-79 25.733204814842992 32.0 20.0 35.0 2.0 37.0 80-81 25.294140883315094 32.0 18.0 35.0 2.0 36.0 82-83 24.825809328368155 32.0 15.5 35.0 2.0 36.0 84-85 24.432984906148665 31.0 9.0 34.5 2.0 35.5 86-87 23.980334687768018 31.0 4.5 34.0 2.0 35.0 88-89 23.455355836586122 31.0 2.0 34.0 2.0 35.0 90-91 22.95985593444614 31.0 2.0 34.0 2.0 35.0 92-93 22.42604481013531 30.0 2.0 34.0 2.0 35.0 94-95 21.805079422671405 30.0 2.0 34.0 2.0 35.0 96-97 21.173259213309485 29.0 2.0 34.0 2.0 35.0 98 20.780545493204745 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 166135.0 3 27737.0 4 20115.0 5 16298.0 6 15197.0 7 15417.0 8 17721.0 9 19840.0 10 22112.0 11 23458.0 12 24445.0 13 24198.0 14 22839.0 15 24083.0 16 25895.0 17 28384.0 18 28924.0 19 28545.0 20 29009.0 21 31123.0 22 33932.0 23 37891.0 24 43030.0 25 49260.0 26 57140.0 27 66357.0 28 76255.0 29 89117.0 30 103447.0 31 121561.0 32 144515.0 33 175120.0 34 216385.0 35 274031.0 36 346978.0 37 381970.0 38 225063.0 39 22294.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.603819496684366 17.703021519058808 12.596173584528808 25.096985399728013 2 16.181200727003823 19.468392276381124 39.02985509027875 25.32055190633631 3 19.76997179114063 23.320873742998593 28.60989667590703 28.299257789953746 4 13.277174736565541 15.217676886247949 36.333274586403185 35.17187379078332 5 14.565597788990935 36.64726711514241 34.12323338288094 14.66390171298571 6 34.11637652802036 34.58952587183864 17.107421810851477 14.186675789289524 7 29.80776202954601 31.064408710782022 20.63850410693609 18.489325152735884 8 26.823232497299678 34.1452304202755 19.88422248479461 19.147314597630217 9 26.97051389839854 15.6265869741487 19.249423406165896 38.15347572128686 10-11 25.857770703246157 24.978867437712584 27.566891061966526 21.596470797074733 12-13 26.568990689699625 22.36166024450857 27.258448092527193 23.810900973264605 14-15 23.601897429561667 24.05419508801134 24.768332173720793 27.575575308706195 16-17 23.797185776590535 26.970665177122843 25.537038855374877 23.695110190911745 18-19 23.711794866791234 26.250884236921827 26.957916014160798 23.079404882126138 20-21 24.57821497659556 25.63686053043553 26.424410569796763 23.360513923172142 22-23 24.101928674985803 25.509602695881817 26.427468445263084 23.961000183869295 24-25 23.912670770516048 25.56199660231982 26.467177121158986 24.05815550600515 26-27 23.754751625439415 25.752650799798992 26.56073824646293 23.93185932829866 28-29 23.80415480268737 26.04443409266054 26.404021234313607 23.747389870338484 30-31 24.064976942186156 25.752196729651565 26.145335952526633 24.03749037563565 32-33 23.767472986722694 25.850834095602725 26.086424927818808 24.295267989855773 34-35 24.250208242640884 25.676484802242477 26.15684149044808 23.91646546466856 36-37 24.156627391901804 25.469034154503255 26.26159901832151 24.112739435273433 38-39 24.051874154301192 25.6238756339934 26.274401243202767 24.049848968502644 40-41 24.23273888090627 25.519389761641364 26.316847722492536 23.931023634959832 42-43 24.065533849817363 25.518777809014537 26.20813607646497 24.207552264703125 44-45 24.047499629913922 25.519699596194062 26.229987401568124 24.202813372323895 46-47 24.021591495537326 25.62115617944189 26.143757460777973 24.21349486424281 48-49 23.884837186743333 25.67801797864516 26.076607769791877 24.36053706481964 50-51 23.791143990565025 25.767338208461414 26.28556331196038 24.155954489013173 52-53 23.96311211937288 25.519462462143238 26.306308336399102 24.211117082084776 54-55 23.6335223700733 25.442870136168505 26.515954363384896 24.4076531303733 56-57 23.655413719734465 25.49175936382504 26.41515594050274 24.437670975937753 58-59 23.646872774629582 25.304168300883216 26.40843352039706 24.640525404090134 60-61 23.498307510682533 25.299434139181127 26.711800803410053 24.490457546726287 62-63 23.50889619890796 25.289245812221367 26.742276672887712 24.459581315982966 64-65 23.32515526758604 25.25440043892128 26.574348414992883 24.846095878499796 66-67 23.382679682840195 25.23611576581079 26.463110933415912 24.918093617933103 68-69 23.556742200184743 25.09947634236544 26.45524703121656 24.888534426233257 70-71 23.364782260031635 24.950493434067795 26.62763899732174 25.057085308578824 72-73 23.365722464915038 24.921947315375913 26.63892692689557 25.073403292813474 74-75 23.39813014601302 25.14860641726581 26.521915001892037 24.93134843482913 76-77 23.364321047419097 24.84234301827164 26.69144444197975 25.101891492329514 78-79 23.27036588017291 24.92005041223764 26.72510797903981 25.084475728549638 80-81 23.426324625928288 24.85266164968056 26.736641507784203 24.98437221660695 82-83 23.397836644137897 24.7758419009057 26.825811698877544 25.00050975607886 84-85 23.342194710284847 24.757497493209605 26.79852321621493 25.101784580290616 86-87 23.38307492096599 24.73300179523785 26.84874676675331 25.03517651704285 88-89 23.348547238490198 24.43745753519072 26.83291333556549 25.38108189075359 90-91 23.3052345389882 24.50435315703193 26.928251417351518 25.262160886628354 92-93 23.4945178305691 24.317646604010662 26.96005275906038 25.227782806359862 94-95 23.37778095334574 24.217207543648698 27.09092798415435 25.31408351885121 96-97 23.61693617190653 23.961904836477967 27.09140209607574 25.329756895539763 98 23.527423616487283 23.856600319128493 26.97895063426054 25.637025430123682 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 104.0 1 73.5 2 75.5 3 129.0 4 141.5 5 176.5 6 257.5 7 451.5 8 706.0 9 803.0 10 820.5 11 877.0 12 1013.5 13 1201.5 14 1332.0 15 1486.0 16 1600.5 17 1674.5 18 1664.0 19 1602.5 20 1672.5 21 1789.5 22 2030.5 23 2364.5 24 2779.5 25 3501.0 26 4561.0 27 5980.5 28 7850.0 29 10766.5 30 15150.5 31 21127.0 32 27891.5 33 34129.5 34 41215.5 35 48869.0 36 57212.5 37 65306.0 38 71585.0 39 78763.5 40 86884.5 41 93875.5 42 101394.5 43 109322.0 44 116280.5 45 123280.5 46 130314.0 47 136742.0 48 141812.5 49 142914.0 50 141817.0 51 142216.5 52 141455.5 53 138801.5 54 133448.5 55 125749.0 56 115891.0 57 104114.5 58 93654.0 59 81293.0 60 66618.5 61 54005.5 62 43975.5 63 33897.5 64 24888.0 65 18958.5 66 14171.0 67 10306.5 68 7607.0 69 5664.0 70 4073.0 71 2945.0 72 2296.0 73 1886.0 74 1492.0 75 1088.0 76 722.5 77 425.0 78 249.5 79 155.0 80 79.0 81 48.0 82 34.5 83 23.5 84 20.5 85 12.5 86 11.5 87 11.0 88 6.0 89 5.5 90 7.5 91 4.0 92 1.5 93 1.5 94 0.5 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38041863280775023 2 0.02389605120192261 3 0.017783863955716555 4 0.01573563099555176 5 0.021620236801739502 6 0.022205446218929444 7 0.013492328229656984 8 0.00871311798927246 9 0.0 10-11 0.0 12-13 0.0046329078860870366 14-15 0.0026659540116430666 16-17 0.005201861486132813 18-19 0.036965728185831305 20-21 0.07693878254333314 22-23 0.09711225161924195 24-25 0.06372280320512695 26-27 0.07375264238307679 28-29 0.05660275529598267 30-31 0.05179103342130982 32-33 0.018694189715789795 34-35 0.3344634377411957 36-37 0.512285821481217 38-39 0.4673384870776007 40-41 0.4765392795811982 42-43 0.4288609678973621 44-45 0.40137238110657897 46-47 0.3999256133807483 48-49 0.3908060999628717 50-51 0.38696972711684874 52-53 0.4482216461160626 54-55 0.4488881346189734 56-57 0.4191074776108631 58-59 0.404038335118222 60-61 0.4186848263651148 62-63 0.3997142877578742 64-65 0.44766894833316095 66-67 0.46816753375195314 68-69 0.41148349937024964 70-71 0.3683405606696356 72-73 0.3545393719142395 74-75 0.33623532180990967 76-77 0.33506490297552977 78-79 0.3347560424497907 80-81 0.3500852780167383 82-83 0.3456149283020929 84-85 0.3461676260849945 86-87 0.33199255353528256 88-89 0.3745340270015625 90-91 0.3531576274569855 92-93 0.3435341837076398 94-95 0.34961385931955746 96-97 0.34985769657672 98 0.3445908118220105 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3075822.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.17455420683454 #Duplication Level Percentage of deduplicated Percentage of total 1 71.78722069266321 33.86530133924035 2 11.353904688972577 10.712307844183394 3 5.467688655862549 7.738073246462463 4 3.1470779917608875 5.9384800526184 5 2.0194588957168964 4.763353657223547 6 1.3747379571636673 3.891159016824624 7 0.9825930920833172 3.2447373760021927 8 0.7011745025324647 2.6462075662534397 9 0.537424584480776 2.2817488673406507 >10 2.5246171236739436 19.672580126855628 >50 0.0764660010214493 2.426138217860156 >100 0.026109805239153336 2.172013613146385 >500 0.0011098246030642673 0.37800657204690613 >1k 4.1618422601992754E-4 0.2698925039419887 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.251163428833008E-5 0.0 10-11 0.0 0.0 0.0 8.12790857208252E-5 0.0 12-13 0.0 0.0 0.0 9.753490286499024E-5 0.0 14-15 0.0 0.0 0.0 9.753490286499024E-5 0.0 16-17 0.0 0.0 0.0 9.753490286499024E-5 0.0 18-19 0.0 0.0 0.0 1.7881398858581542E-4 0.0 20-21 0.0 0.0 0.0 2.763488914508057E-4 0.0 22-23 0.0 0.0 0.0 4.06395428604126E-4 1.625581714416504E-5 24-25 0.0 0.0 0.0 7.965350400640869E-4 3.251163428833008E-5 26-27 0.0 0.0 0.0 0.0019344422401556397 3.251163428833008E-5 28-29 0.0 0.0 0.0 0.008290466743524169 3.251163428833008E-5 30-31 0.0 0.0 0.0 0.033080587888375854 3.251163428833008E-5 32-33 0.0 0.0 0.0 0.0841563653553424 3.251163428833008E-5 34-35 0.0 0.0 0.0 0.15324358821804385 3.251163428833008E-5 36-37 0.0 0.0 0.0 0.268009657255849 3.251163428833008E-5 38-39 0.0 0.0 0.0 0.4528545540021497 3.251163428833008E-5 40-41 0.0 0.0 0.0 0.6637737814476911 3.251163428833008E-5 42-43 0.0 0.0 0.0 0.8849829411454889 3.251163428833008E-5 44-45 0.0 3.251163428833008E-5 0.0 1.151318249235489 3.251163428833008E-5 46-47 0.0 3.251163428833008E-5 0.0 1.4719479865870002 3.251163428833008E-5 48-49 0.0 3.251163428833008E-5 0.0 1.8090448667055505 3.251163428833008E-5 50-51 0.0 3.251163428833008E-5 0.0 2.1684122163116073 3.251163428833008E-5 52-53 0.0 3.251163428833008E-5 0.0 2.5338917531638696 3.251163428833008E-5 54-55 0.0 3.251163428833008E-5 0.0 2.9463343457456252 3.251163428833008E-5 56-57 0.0 3.251163428833008E-5 0.0 3.426027253852791 3.251163428833008E-5 58-59 0.0 3.251163428833008E-5 0.0 3.9307703761791153 3.251163428833008E-5 60-61 0.0 3.251163428833008E-5 0.0 4.469211807445294 3.251163428833008E-5 62-63 0.0 3.251163428833008E-5 0.0 5.013505332883373 3.251163428833008E-5 64-65 0.0 3.251163428833008E-5 0.0 5.594000563101506 3.251163428833008E-5 66-67 0.0 3.251163428833008E-5 0.0 6.267787927910003 3.251163428833008E-5 68-69 0.0 3.251163428833008E-5 0.0 7.002030676677649 3.251163428833008E-5 70-71 0.0 3.251163428833008E-5 0.0 7.763388128441763 3.251163428833008E-5 72-73 0.0 3.251163428833008E-5 0.0 8.534352768138078 3.251163428833008E-5 74-75 0.0 3.251163428833008E-5 0.0 9.312648781366413 6.502326857666016E-5 76-77 0.0 3.251163428833008E-5 0.0 10.172045066326984 9.753490286499024E-5 78-79 1.625581714416504E-5 3.251163428833008E-5 0.0 11.10763236624226 9.753490286499024E-5 80-81 3.251163428833008E-5 3.251163428833008E-5 0.0 12.081908510960648 9.753490286499024E-5 82-83 3.251163428833008E-5 3.251163428833008E-5 0.0 13.061614098605187 9.753490286499024E-5 84-85 3.251163428833008E-5 3.251163428833008E-5 0.0 14.05523466572513 9.753490286499024E-5 86 3.251163428833008E-5 3.251163428833008E-5 0.0 14.815551745192018 9.753490286499024E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6930 0.0 30.480375 1 GTACATG 9355 0.0 26.858994 1 TCAACGC 8045 0.0 25.710209 4 TACATGG 9425 0.0 25.645588 2 CAACGCA 8030 0.0 25.529785 5 ATCAACG 8200 0.0 25.000507 3 AACGCAG 8310 0.0 24.830698 6 TATCAAC 8410 0.0 24.541431 2 ACATGGG 9835 0.0 23.455719 3 GGTATCA 4785 0.0 23.370352 1 ACGCAGA 9350 0.0 21.527922 7 CATGGGG 6575 0.0 21.134989 4 CGCAGAG 9505 0.0 20.983225 8 GAGTACA 6680 0.0 18.738436 1 AGTACAT 6795 0.0 18.08959 2 AGAGTAC 7290 0.0 17.73633 10-11 GCAGAGT 10700 0.0 17.611368 9 TAAGGCG 655 0.0 17.504667 5 GCGTACG 160 0.0015103123 17.19358 9 TCGCGTA 165 0.0018556323 16.672564 9 >>END_MODULE