##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920884_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3075822 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.16992335707333 31.0 30.0 34.0 26.0 34.0 2 30.18080825223306 31.0 30.0 34.0 26.0 34.0 3 30.31900155470635 31.0 30.0 34.0 26.0 34.0 4 33.95635053003718 35.0 35.0 37.0 30.0 37.0 5 33.46910679486654 35.0 35.0 37.0 28.0 37.0 6 33.40962903575044 35.0 35.0 37.0 28.0 37.0 7 33.22055047398712 35.0 33.0 37.0 27.0 37.0 8 33.15036435788547 35.0 33.0 37.0 27.0 37.0 9 34.47969453368888 38.0 34.0 39.0 27.0 39.0 10-11 34.276933125518966 37.0 34.0 39.0 27.0 39.0 12-13 34.100644803242844 37.0 34.0 39.0 26.0 39.0 14-15 34.98897562992917 38.0 34.0 40.0 25.0 41.0 16-17 34.86496877907759 38.0 33.5 40.0 25.0 41.0 18-19 34.77311918570061 38.0 33.5 40.0 25.0 41.0 20-21 34.65582680012042 38.0 34.0 40.0 24.5 41.0 22-23 34.50600652443477 38.0 33.0 40.0 24.0 41.0 24-25 34.32807051253291 38.0 33.0 40.0 23.0 41.0 26-27 34.14363314912241 38.0 33.0 40.0 22.0 41.0 28-29 34.085814621262216 38.0 33.0 40.0 22.5 41.0 30-31 34.07127102933785 38.0 33.0 40.0 22.0 41.0 32-33 33.92121081779115 38.0 33.0 40.0 20.5 41.0 34-35 33.751494397270065 38.0 33.0 40.0 19.0 41.0 36-37 33.56049179698955 38.0 32.5 40.0 18.0 41.0 38-39 33.37625372989724 38.0 32.0 40.0 17.0 41.0 40-41 33.15774043491463 38.0 32.0 40.0 15.5 41.0 42-43 33.1795227422133 38.0 32.0 40.0 15.5 41.0 44-45 33.0319124448684 38.0 32.0 40.0 15.0 41.0 46-47 32.77893584219113 37.5 31.0 40.0 11.0 41.0 48-49 32.51522812438431 37.0 31.0 40.0 9.0 41.0 50-51 32.24992847440457 37.0 31.0 40.0 8.0 41.0 52-53 31.991516901823317 37.0 30.5 40.0 7.5 41.0 54-55 31.707562563763442 36.0 30.0 40.0 4.0 41.0 56-57 31.38142112905103 36.0 30.0 39.0 2.0 41.0 58-59 31.045579685690527 35.5 29.0 39.0 2.0 40.0 60-61 30.710568264353398 35.0 29.0 39.0 2.0 40.0 62-63 30.38286805933503 35.0 28.5 39.0 2.0 40.0 64-65 29.97528628119573 35.0 28.0 38.0 2.0 40.0 66-67 29.53553570395166 34.0 28.0 38.0 2.0 40.0 68-69 29.07787186644741 34.0 27.0 37.0 2.0 39.5 70-71 28.64733915031494 34.0 26.0 36.5 2.0 39.0 72-73 28.200188762548677 34.0 26.0 36.0 2.0 39.0 74-75 27.748591108328114 33.0 26.0 35.5 2.0 38.5 76-77 26.305553604857497 31.5 24.0 34.0 2.0 36.0 78-79 27.14065378295623 33.0 25.5 35.0 2.0 37.0 80-81 27.167497989155418 33.0 26.0 35.0 2.0 36.5 82-83 26.824435711819476 33.0 25.0 35.0 2.0 36.0 84-85 26.5010393969482 33.0 24.5 35.0 2.0 36.0 86-87 25.968237921440185 32.0 23.0 35.0 2.0 35.0 88-89 25.598963138959277 32.0 21.5 35.0 2.0 35.0 90-91 25.232372029330698 32.0 20.0 34.5 2.0 35.0 92-93 24.915076847749965 32.0 18.5 34.0 2.0 35.0 94-95 24.53058662042212 32.0 15.0 34.0 2.0 35.0 96-97 23.993720052720867 31.0 4.5 34.0 2.0 35.0 98-99 23.38406107375524 31.0 2.0 34.0 2.0 35.0 100-101 21.193651973358666 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 77413.0 3 34358.0 4 18374.0 5 12942.0 6 11099.0 7 10856.0 8 12456.0 9 14290.0 10 16137.0 11 18284.0 12 20322.0 13 21717.0 14 23671.0 15 25314.0 16 26563.0 17 27689.0 18 26755.0 19 25938.0 20 26096.0 21 27154.0 22 29882.0 23 33254.0 24 38474.0 25 44872.0 26 52846.0 27 63642.0 28 74561.0 29 88269.0 30 104046.0 31 122476.0 32 146605.0 33 179197.0 34 223723.0 35 292287.0 36 386622.0 37 449905.0 38 251238.0 39 16494.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.57746704134844 19.056848197530734 13.253298145299174 25.112386615821652 2 16.215535229281798 20.5292764015603 37.89770669434057 25.357481674817333 3 19.52373024755466 24.164136407059537 28.95509003258719 27.357043312798616 4 13.692939851733927 16.264851238059748 35.804380349071366 34.23782856113496 5 14.506929187774926 37.03271510427352 34.050480343268156 14.409875364683398 6 34.04183993654718 35.13322456264713 16.799538098869366 14.025397401936326 7 29.622371584329393 31.28797902737225 20.59609328808191 18.493556100216445 8 26.793531953678762 34.510721755194055 19.752475972689023 18.943270318438163 9 26.682457202763505 15.56748256529468 19.21815683746492 38.5319033944769 10-11 25.826523617610892 25.194950015070017 27.544391448042948 21.434134919276143 12-13 26.500259086245777 22.411220647741654 27.357245431489265 23.731274834523308 14-15 23.50160313658502 24.101747948618254 24.756689581947615 27.639959332849106 16-17 23.76365501997867 27.19545783722832 25.437588531117083 23.603298611675925 18-19 23.726433104905944 26.377108390025334 26.87429302771795 23.022165477350775 20-21 24.495457675848886 25.658614641952 26.357432491216603 23.488495190982515 22-23 24.087961160531037 25.637355444884275 26.381026956506037 23.89365643807865 24-25 23.96052574222834 25.718595053958065 26.368860143640937 23.95201906017266 26-27 23.825245712735292 25.867351071779577 26.467094777723954 23.84030843776118 28-29 23.799614682399195 26.085338074969922 26.329873432583973 23.78517381004691 30-31 24.12130063359523 25.76196220541935 26.13478292611503 23.981954234870386 32-33 23.843629786564925 25.859650303858423 26.14418270433916 24.15253720523749 34-35 24.168414371048357 25.75961527361661 26.223809025975175 23.848161329359858 36-37 24.171028845500338 25.529371823484514 26.264825906870882 24.034773424144266 38-39 23.986046837602444 25.653245507069677 26.311487179003525 24.049220476324358 40-41 24.148957481044224 25.57163260979001 26.342302504152777 23.937107405012988 42-43 24.024416652955903 25.580599471555633 26.258225646915147 24.136758228573324 44-45 23.954679895870427 25.53925753207708 26.30383916826422 24.202223403788274 46-47 23.96157847681807 25.602749068472058 26.196936568289118 24.238735886420752 48-49 23.834922319484086 25.661232184464154 26.131961609418298 24.371883886633462 50-51 23.72382308015598 25.803945732961886 26.30453956829269 24.167691618589444 52-53 23.922505658188513 25.54643258570355 26.29479934361437 24.236262412493566 54-55 23.609297008136394 25.42651606712663 26.41403297933532 24.55015394540165 56-57 23.600037715114333 25.595134750251162 26.199763305144536 24.60506422948997 58-59 23.497094091734397 25.48170483202857 26.270285314007317 24.75091576222971 60-61 23.400513898561048 25.56103086041669 26.456963231196955 24.581492009825308 62-63 23.38693079119329 25.563343942924753 26.40081235069593 24.64891291518602 64-65 23.113249876609682 25.546623982395666 26.247185107585302 25.09294103340935 66-67 23.220546092202294 25.512008193562174 26.09975772529125 25.167687988944287 68-69 23.45033255999853 25.34701223164119 26.075521927775767 25.127133280584513 70-71 23.17521194435994 25.190636515158488 26.156749318774953 25.47740222170662 72-73 23.250134333581833 25.12387637927737 26.03175021369773 25.594239073443063 74-75 23.216915900942332 25.34181618743715 25.884348766481097 25.556919145139425 76-77 23.16706950137146 24.939819232814994 26.17050207023143 25.722609195582113 78-79 23.09326073531201 25.062439764661633 26.106882300230172 25.737417199796187 80-81 23.226692381068048 25.00735289455291 26.031945623861198 25.734009100517845 82-83 23.122587156625542 24.98192958537381 26.06722747002165 25.828255787979003 84-85 23.017904601246293 24.866925480707874 26.02885734830984 26.08631256973599 86-87 22.954323867875846 24.841553307292543 26.0826905443108 26.12143228052081 88-89 22.899668422289757 24.658399387977326 25.948969648968617 26.492962540764296 90-91 22.836781775560638 24.666475638907986 25.965806683168076 26.5309359023633 92-93 22.952607969503518 24.53460984943274 25.979564823463814 26.53321735759993 94-95 22.684067285456003 24.411216496829596 26.130514069388983 26.774202148325422 96-97 22.844533428617783 24.15338867244334 26.136414991954688 26.865662906984195 98-99 22.65997511802519 24.1552020087651 26.02102499235545 27.163797880854258 100-101 22.773315073935766 23.97862714105336 26.06537130936885 27.182686475642026 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 127.0 1 78.0 2 67.0 3 108.0 4 88.5 5 91.0 6 145.0 7 275.5 8 421.5 9 453.5 10 401.0 11 345.5 12 341.5 13 376.0 14 428.5 15 470.5 16 521.5 17 598.5 18 691.0 19 794.0 20 935.0 21 1126.5 22 1357.0 23 1659.5 24 2056.0 25 2581.5 26 3415.0 27 4643.0 28 6135.0 29 8192.5 30 11493.5 31 16323.0 32 22754.5 33 29114.0 34 35133.5 35 41593.0 36 49023.5 37 56750.5 38 64017.0 39 70212.0 40 76868.0 41 85052.0 42 92388.0 43 99383.5 44 106407.0 45 113792.5 46 120526.5 47 127363.5 48 135160.5 49 139234.5 50 140176.0 51 141360.5 52 142046.0 53 141047.5 54 137623.5 55 130463.0 56 119826.0 57 107602.5 58 96484.0 59 84127.5 60 69059.0 61 55927.0 62 45337.5 63 34723.5 64 25212.0 65 19058.5 66 14461.0 67 10516.0 68 7700.0 69 5833.0 70 4307.0 71 3043.0 72 2230.0 73 1919.5 74 1557.5 75 1083.0 76 717.0 77 415.5 78 251.0 79 131.5 80 56.5 81 32.5 82 17.5 83 7.0 84 4.0 85 3.5 86 3.5 87 2.0 88 1.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18983543260955935 2 0.0 3 0.012354421029565429 4 0.013167211886773684 5 0.0067949315662609875 6 0.10738592805435425 7 0.14272607452576905 8 0.1234466753927893 9 0.1418157487656958 10-11 0.11366067347200196 12-13 0.11333555712911866 14-15 0.11585520878646424 16-17 0.06645378048534668 18-19 0.07856436425774964 20-21 0.03672189092866882 22-23 0.08311599305811584 24-25 0.05748056942176758 26-27 0.06531587328525512 28-29 0.03951789147746521 30-31 0.024432493167680057 32-33 0.030967331659634396 34-35 0.019425701487277222 36-37 0.023245818516156005 38-39 0.03132495963680603 40-41 0.025033958402014164 42-43 0.012354421029565429 44-45 0.026236888870682377 46-47 0.03364954148842163 48-49 0.008973211063579102 50-51 0.015426770469812622 52-53 0.006209722149071045 54-55 0.01238693266385376 56-57 0.004291535726059571 58-59 0.0034299774174188233 60-61 0.02280691145326355 62-63 0.009851025189364013 64-65 0.007022513006279298 66-67 0.03943661239174438 68-69 0.08997594789295349 70-71 0.021571469350307005 72-73 0.04506112512362549 74-75 0.08591199360691223 76-77 0.24598302502550537 78-79 0.079978620349292 80-81 0.016337096229885866 82-83 0.011476606903780518 84-85 0.012468211749574586 86-87 0.2624014003411121 88-89 0.6200781449641755 90-91 0.2667579593357483 92-93 0.35154830155971317 94-95 0.0010078606629382325 96-97 0.0038688844803112794 98-99 0.0032999308802655032 100-101 0.004730442788952027 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3075822.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.80556551577446 #Duplication Level Percentage of deduplicated Percentage of total 1 68.79883055938252 30.13771679477697 2 12.313781151954203 10.788242939976769 3 5.9379045277936955 7.803397974560417 4 3.4783487614567767 6.094841382268311 5 2.2633807322216017 4.957433647623747 6 1.5563653505515922 4.090647859804144 7 1.1139924439767264 3.4159348292090135 8 0.8517083583486462 2.984765303357946 9 0.6024050822913033 2.3749825769412474 >10 2.957095177142311 21.42665811145402 >50 0.09221825207655268 2.707439107164407 >100 0.03195763133126312 2.4096385677924195 >500 0.0013413143154490294 0.4142044336346556 >1k 6.706571575050302E-4 0.3940964714358787 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.251163428833008E-5 0.0 10-11 0.0 0.0 0.0 4.876745143249512E-5 0.0 12-13 0.0 0.0 0.0 6.502326857666016E-5 0.0 14-15 0.0 0.0 0.0 6.502326857666016E-5 6.502326857666016E-5 16-17 0.0 0.0 0.0 6.502326857666016E-5 6.502326857666016E-5 18-19 0.0 0.0 0.0 1.1379072000915528E-4 6.502326857666016E-5 20-21 0.0 0.0 0.0 1.4630235429748535E-4 6.502326857666016E-5 22-23 0.0 0.0 0.0 2.763488914508057E-4 6.502326857666016E-5 24-25 0.0 0.0 0.0 6.827443200549317E-4 6.502326857666016E-5 26-27 0.0 0.0 0.0 0.0018694189715789795 6.502326857666016E-5 28-29 0.0 0.0 0.0 0.008225443474947509 9.753490286499024E-5 30-31 3.251163428833008E-5 0.0 0.0 0.03306433207123169 9.753490286499024E-5 32-33 6.502326857666016E-5 0.0 0.0 0.08485536549254151 9.753490286499024E-5 34-35 6.502326857666016E-5 0.0 0.0 0.1548854257496045 9.753490286499024E-5 36-37 6.502326857666016E-5 0.0 0.0 0.2704967972789063 9.753490286499024E-5 38-39 6.502326857666016E-5 0.0 0.0 0.4551628800366211 1.300465371533203E-4 40-41 6.502326857666016E-5 0.0 0.0 0.6683416660652014 1.300465371533203E-4 42-43 6.502326857666016E-5 0.0 0.0 0.891989198334624 1.6255817144165038E-4 44-45 6.502326857666016E-5 0.0 0.0 1.1599663439561847 1.6255817144165038E-4 46-47 6.502326857666016E-5 0.0 0.0 1.4813601047134717 1.6255817144165038E-4 48-49 6.502326857666016E-5 0.0 0.0 1.817481635803372 1.6255817144165038E-4 50-51 6.502326857666016E-5 0.0 0.0 2.174150519763497 1.6255817144165038E-4 52-53 6.502326857666016E-5 0.0 0.0 2.536395149004071 1.6255817144165038E-4 54-55 6.502326857666016E-5 0.0 0.0 2.945098903642669 1.6255817144165038E-4 56-57 6.502326857666016E-5 0.0 0.0 3.419492415360837 1.6255817144165038E-4 58-59 6.502326857666016E-5 0.0 0.0 3.9196513972525064 1.6255817144165038E-4 60-61 6.502326857666016E-5 0.0 0.0 4.453004757752562 1.6255817144165038E-4 62-63 6.502326857666016E-5 0.0 0.0 4.993998352310374 1.6255817144165038E-4 64-65 6.502326857666016E-5 0.0 0.0 5.572835489179803 1.6255817144165038E-4 66-67 6.502326857666016E-5 0.0 0.0 6.239356503724858 2.2758144001831055E-4 68-69 6.502326857666016E-5 0.0 0.0 6.964122111097456 2.2758144001831055E-4 70-71 6.502326857666016E-5 0.0 0.0 7.717985631158109 2.2758144001831055E-4 72-73 6.502326857666016E-5 0.0 0.0 8.486934549528549 2.2758144001831055E-4 74-75 6.502326857666016E-5 0.0 0.0 9.266368469956975 2.2758144001831055E-4 76-77 6.502326857666016E-5 0.0 0.0 10.127048964471935 2.2758144001831055E-4 78-79 6.502326857666016E-5 0.0 0.0 11.061595892089985 2.2758144001831055E-4 80-81 6.502326857666016E-5 0.0 0.0 12.032490826842386 2.438372571624756E-4 82-83 6.502326857666016E-5 0.0 0.0 13.011383623629715 2.600930743066406E-4 84-85 6.502326857666016E-5 0.0 0.0 14.004906655846796 2.600930743066406E-4 86-87 6.502326857666016E-5 0.0 0.0 15.030973833986494 2.600930743066406E-4 88-89 6.502326857666016E-5 0.0 0.0 16.109563557318985 2.600930743066406E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6535 0.0 32.522648 1 TCAACGC 7835 0.0 26.598423 4 CAACGCA 7900 0.0 26.313488 5 GGTATCA 4645 0.0 25.999916 1 ATCAACG 8020 0.0 25.984873 3 GTACATG 9530 0.0 25.494822 1 AACGCAG 8250 0.0 25.369743 6 TATCAAC 8355 0.0 25.281836 2 TACATGG 9650 0.0 24.594484 2 ACATGGG 10060 0.0 23.027788 3 ACGCAGA 9675 0.0 21.387838 7 CGCAGAG 9825 0.0 20.818424 8 CATGGGG 6680 0.0 19.827051 4 GTATAGG 620 0.0 19.172215 1 TAAGGCG 800 0.0 18.390905 5 GCAGAGT 10880 0.0 18.014585 9 AGAGTAC 8010 0.0 17.921225 10-11 GTGTAAG 1340 0.0 17.741453 1 CTAGACG 270 4.9110713E-7 17.581934 4 TATACCG 135 0.00944914 17.577925 5 >>END_MODULE