##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920883_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2793067 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.09411303058609 31.0 30.0 33.0 25.0 34.0 2 29.16442033076901 31.0 30.0 34.0 23.0 34.0 3 29.22694944303162 31.0 30.0 34.0 23.0 34.0 4 32.762605050290595 35.0 33.0 37.0 26.0 37.0 5 32.72026628791934 35.0 33.0 37.0 26.0 37.0 6 32.83659396641756 35.0 33.0 37.0 26.0 37.0 7 32.69198698062023 35.0 33.0 37.0 25.0 37.0 8 32.636103967430785 35.0 33.0 37.0 25.0 37.0 9 33.960849131080636 37.0 34.0 39.0 25.0 39.0 10-11 33.786013905144415 37.0 33.5 39.0 25.0 39.0 12-13 33.621488492757244 37.0 33.0 39.0 23.0 39.0 14-15 34.44618210017876 38.0 33.0 40.0 23.5 41.0 16-17 34.34367149087365 38.0 33.0 40.0 22.5 41.0 18-19 34.23168062205454 38.0 33.0 40.0 21.5 41.0 20-21 34.13716999986037 38.0 33.0 40.0 19.0 41.0 22-23 33.92087640575754 38.0 33.0 40.0 18.5 41.0 24-25 33.72449515174537 38.0 33.0 40.0 18.0 41.0 26-27 33.76038920656039 38.0 33.0 40.0 18.0 41.0 28-29 33.614450709560494 38.0 33.0 40.0 17.0 41.0 30-31 33.36877507771922 38.0 32.5 40.0 16.0 41.0 32-33 33.12466170700524 38.0 32.0 40.0 15.0 41.0 34-35 32.80554691312453 38.0 31.5 40.0 10.5 41.0 36-37 32.49595212001717 37.5 31.0 40.0 9.0 41.0 38-39 32.29885946165989 37.0 31.0 40.0 8.0 41.0 40-41 32.089443790643045 37.0 30.5 40.0 7.5 41.0 42-43 31.848741186659684 37.0 30.0 40.0 4.0 41.0 44-45 31.565075954139303 37.0 30.0 40.0 2.0 41.0 46-47 31.29582820605449 36.0 30.0 39.5 2.0 41.0 48-49 30.979774921260393 36.0 29.0 39.0 2.0 40.0 50-51 29.81232960039985 34.5 27.5 38.0 2.0 39.5 52-53 30.2765425963645 35.5 28.5 38.5 2.0 39.5 54-55 30.92814959326074 36.0 30.0 39.0 2.0 40.0 56-57 30.865474405017853 36.0 29.0 39.0 2.0 41.0 58-59 30.609355951719024 35.5 29.0 39.0 2.0 40.5 60-61 30.269488522831715 35.0 28.5 39.0 2.0 40.0 62-63 29.86396334208954 35.0 28.0 38.5 2.0 40.0 64-65 29.436952282204473 34.5 28.0 38.0 2.0 40.0 66-67 29.03896093434207 34.0 27.5 37.5 2.0 40.0 68-69 28.584906126491056 34.0 26.0 37.0 2.0 39.5 70-71 28.25255319689789 34.0 26.0 36.0 2.0 39.0 72-73 27.79884048610363 34.0 26.0 36.0 2.0 39.0 74-75 27.370563971433555 33.0 25.5 35.0 2.0 38.0 76-77 26.961287538036146 33.0 25.0 35.0 2.0 37.0 78-79 26.52385871874896 33.0 24.0 35.0 2.0 37.0 80-81 26.1013097788202 32.5 23.0 35.0 2.0 36.0 82-83 25.649004660468222 32.0 20.5 35.0 2.0 36.0 84-85 25.273254633705527 32.0 19.5 35.0 2.0 35.0 86-87 24.837640128217476 32.0 18.0 34.0 2.0 35.0 88-89 24.322389867482592 31.0 11.5 34.0 2.0 35.0 90-91 23.841201267280734 31.0 4.5 34.0 2.0 35.0 92-93 23.327150762942672 31.0 2.0 34.0 2.0 35.0 94-95 22.69423898531614 30.5 2.0 34.0 2.0 35.0 96-97 22.050607092490083 30.0 2.0 34.0 2.0 35.0 98 21.655397453766774 30.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 125738.0 3 20798.0 4 14988.0 5 12467.0 6 11682.0 7 11901.0 8 13450.0 9 15530.0 10 16796.0 11 18408.0 12 19749.0 13 19952.0 14 18411.0 15 19429.0 16 20892.0 17 22986.0 18 23412.0 19 23275.0 20 23555.0 21 25279.0 22 28012.0 23 31046.0 24 35201.0 25 41129.0 26 47933.0 27 56288.0 28 65813.0 29 77389.0 30 91752.0 31 110182.0 32 134327.0 33 165957.0 34 211882.0 35 272650.0 36 349188.0 37 371824.0 38 204613.0 39 19182.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99416943140818 17.74137684486764 13.293179010815367 24.97127471290881 2 16.178572362208364 18.901727831993238 39.05360830723029 25.866091498568107 3 19.49204860004512 23.05508506440258 28.511990660999288 28.940875674553013 4 13.707727890094395 15.077716477998862 35.41223017126021 35.802325460646536 5 15.040735855968643 36.361930497478426 33.294753846280564 15.302579800272373 6 34.391876962656134 33.8493790226729 16.81632600441261 14.942418010258365 7 30.3187411488145 30.975416307844906 20.02320331005244 18.682639233288157 8 27.630379929942706 33.576405809534826 19.393617360287333 19.399596900235135 9 27.37295596561056 15.494794790099913 18.946090444661728 38.1861587996278 10-11 26.431079680895476 24.633664224189474 26.637967022619584 22.297289072295463 12-13 26.824762145164627 21.946072810567387 26.887760445338365 24.34140459892962 14-15 24.08114170098323 23.44850438982875 24.26313301101454 28.207220898173478 16-17 24.19940764759042 26.590371695408265 25.058486923419547 24.15173373358177 18-19 24.326226872275488 25.68160764692051 26.4653281786077 23.5268373021963 20-21 24.994213750850918 24.826018415678405 26.324836086130915 23.85493174733976 22-23 24.684684555550042 24.605059488561242 26.27353073923561 24.43672521665311 24-25 24.513904711137098 24.882318297301595 26.15002070624784 24.453756285313467 26-27 24.07104335136998 25.236845207151553 26.072749446558056 24.619361994920407 28-29 24.15932879200938 25.326642364201334 26.024032252200197 24.48999659158909 30-31 24.441328525369507 25.08076455078289 25.894678512492312 24.583228411355286 32-33 24.119939375003916 25.204260221963402 25.727217955455128 24.948582447577554 34-35 24.604772379022734 25.24504139436603 25.866419286328558 24.283766940282682 36-37 24.720300178735204 24.957636500761474 25.794438146053484 24.52762517444984 38-39 24.452423969523267 25.051182009103538 25.770238221305846 24.72615580006735 40-41 24.64565024880766 24.975667645115323 25.916039215862558 24.462642890214465 42-43 24.523638185723776 24.979457402236648 25.692535362743097 24.804369049296486 44-45 24.30594025337199 25.06650543049071 25.871380608714478 24.756173707422825 46-47 24.496187740613276 25.078349234367796 25.688486822127743 24.736976202891185 48-49 24.429179361451286 25.209156270987044 25.4964575577073 24.865206809854374 50-51 24.346179481974012 25.35776203574117 25.70550813581429 24.590550346470526 52-53 24.557209136780266 25.016043472868105 25.768046435293122 24.658700955058503 54-55 24.203617166766016 24.982024178199357 25.966308276715488 24.848050378319144 56-57 24.10200137909643 25.161087771742107 25.875939188209284 24.86097166095218 58-59 24.192763567861046 24.849818984979024 25.893826802010462 25.063590645149464 60-61 24.08191850525577 24.904208982116312 26.14301808783858 24.87085442478934 62-63 24.000539037548457 25.02855551412952 26.10693606565477 24.863969382667246 64-65 23.934667223437884 24.87244803952956 25.99455296549882 25.198331771533734 66-67 23.98584882762172 24.895099589316104 26.011292458641243 25.10775912442093 68-69 24.145423820368155 24.62753551595691 26.068317935313402 25.158722728361532 70-71 23.955274793059605 24.65294979649948 26.092560133154613 25.299215277286297 72-73 23.882872106556317 24.742625400520136 26.058037702774545 25.316464790149002 74-75 23.88497401771371 24.99481934508621 25.96361079257017 25.156595844629916 76-77 23.95603969371011 24.591665556322123 26.15667673818004 25.29561801178773 78-79 23.90217326112713 24.6695108124347 26.112497589275808 25.31581833716236 80-81 23.985181864648293 24.706045679971524 26.03256225437955 25.276210201000637 82-83 23.943153557374437 24.5601681242125 26.13911624879855 25.357562069614513 84-85 23.81079034724821 24.729716915734176 26.048411022808658 25.411081714208954 86-87 23.895830583739823 24.715115177666387 25.97440655916093 25.41464767943286 88-89 23.736249365203317 24.496173076429073 26.053528966578842 25.714048591788774 90-91 23.77382740280187 24.462854090642463 26.171447742703023 25.591870763852643 92-93 23.895506455779312 24.326963276694112 26.240889571477627 25.536640696048952 94-95 23.75282079372848 24.217366121739754 26.279228272143172 25.750584812388595 96-97 23.93876425783811 23.960513578508582 26.318186634674273 25.78253552897904 98 23.80888071728456 23.92209231701978 26.174112400585166 26.0949145651105 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 63.0 1 51.5 2 67.0 3 110.5 4 126.0 5 154.5 6 238.0 7 433.5 8 676.0 9 791.0 10 839.5 11 873.5 12 966.0 13 1151.0 14 1326.5 15 1479.0 16 1556.0 17 1656.5 18 1758.0 19 1769.5 20 1800.5 21 1920.5 22 2104.5 23 2380.0 24 2795.5 25 3395.5 26 4292.5 27 5524.5 28 7261.5 29 9858.5 30 13304.5 31 18327.0 32 22956.5 33 26852.0 34 31656.5 35 37173.5 36 43165.0 37 49063.5 38 55711.0 39 62552.5 40 69192.5 41 76477.0 42 84929.5 43 92014.0 44 97921.5 45 103849.0 46 110467.0 47 117395.5 48 121609.5 49 124033.5 50 125069.0 51 126903.5 52 128028.0 53 129748.5 54 128776.0 55 122870.5 56 114202.0 57 104093.5 58 95956.0 59 84577.0 60 72078.0 61 60785.5 62 49838.5 63 38459.0 64 28492.0 65 21830.5 66 16716.5 67 12929.0 68 9788.5 69 7581.5 70 5726.5 71 4277.0 72 3575.0 73 2900.0 74 2186.5 75 1640.5 76 1181.5 77 775.0 78 440.5 79 235.0 80 139.0 81 82.0 82 52.0 83 39.5 84 29.5 85 17.0 86 8.0 87 11.5 88 11.5 89 7.5 90 8.5 91 7.5 92 6.5 93 5.0 94 2.0 95 3.5 96 2.5 97 1.0 98 1.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3510477908335174 2 0.02176818529594886 3 0.01707800063514409 4 0.0148940215182808 5 0.02019285609689993 6 0.021983002914000987 7 0.012960662955811657 8 0.007518616631824442 9 0.0 10-11 3.580293634202116E-5 12-13 0.0048154949380018455 14-15 0.0027389246301646186 16-17 0.004833396406172856 18-19 0.033529449884302814 20-21 0.0704243757847556 22-23 0.08909560708711964 24-25 0.058681012664572665 26-27 0.06795397317715615 28-29 0.051681538609707534 30-31 0.04690184660804771 32-33 0.017525537339419354 34-35 0.3111454182803348 36-37 0.4746216256180034 38-39 0.43180131375294617 40-41 0.4405372302203993 42-43 0.3953718260249396 44-45 0.372332636488849 46-47 0.3699875441584466 48-49 0.36160965705441367 50-51 0.3581009692928956 52-53 0.41395354998644857 54-55 0.41363132355937043 56-57 0.3870476433254197 58-59 0.37324561136557055 60-61 0.3880501255429963 62-63 0.3698264309449075 64-65 0.4136492250275414 66-67 0.43307231799308793 68-69 0.38024508542043567 70-71 0.3414168009575137 72-73 0.32892157617414836 74-75 0.31041145808532344 76-77 0.30955218761311487 78-79 0.3091225523770107 80-81 0.32387336214992335 82-83 0.319899236215959 84-85 0.32040047732474736 86-87 0.3066342483012402 88-89 0.34712736930406607 90-91 0.32723883816607335 92-93 0.3184671187622781 94-95 0.32417768710883055 96-97 0.32480423849481593 98 0.3186461334439883 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2793067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.32434264157756 #Duplication Level Percentage of deduplicated Percentage of total 1 71.28364696231097 34.44735380547964 2 12.743206453591805 12.316141500314655 3 5.636184955328845 8.170947989178467 4 3.077845359651828 5.949394150304177 5 1.900566302239957 4.592180860123986 6 1.2256130584332163 3.5536167229031133 7 0.85523759569172 2.8930156229915953 8 0.619219446960155 2.3938698180184548 9 0.4752883344042249 2.0671196692765013 >10 2.0607073432278593 16.741804056840813 >50 0.08683927848196689 2.8541450491674714 >100 0.03288391101250082 2.7969177601247974 >500 0.00171629646734489 0.5206399206187692 >1k 0.0010447021974047408 0.7028530746575027 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 1.790146817101058E-5 0.0 3.580293634202116E-5 0.0 18-19 0.0 3.580293634202116E-5 0.0 5.370440451303174E-5 0.0 20-21 0.0 3.580293634202116E-5 0.0 7.160587268404232E-5 0.0 22-23 0.0 3.580293634202116E-5 0.0 1.4321174536808463E-4 0.0 24-25 0.0 3.580293634202116E-5 0.0 4.475367042752644E-4 0.0 26-27 0.0 3.580293634202116E-5 0.0 8.771719403795182E-4 0.0 28-29 0.0 3.580293634202116E-5 0.0 0.00341918042066302 0.0 30-31 0.0 3.580293634202116E-5 0.0 0.014356977473150484 0.0 32-33 0.0 3.580293634202116E-5 0.0 0.03800481692705546 0.0 34-35 0.0 3.580293634202116E-5 0.0 0.07196390204746252 0.0 36-37 0.0 3.580293634202116E-5 0.0 0.13230975125193917 0.0 38-39 0.0 3.580293634202116E-5 0.0 0.23592344902574838 0.0 40-41 0.0 3.580293634202116E-5 0.0 0.3563108224757945 0.0 42-43 0.0 3.580293634202116E-5 0.0 0.48108405562773826 0.0 44-45 0.0 3.580293634202116E-5 0.0 0.6353410068573364 0.0 46-47 0.0 3.580293634202116E-5 0.0 0.8248101459793123 0.0 48-49 0.0 3.580293634202116E-5 0.0 1.0330221222763365 0.0 50-51 0.0 3.580293634202116E-5 0.0 1.2637899484688337 0.0 52-53 3.580293634202116E-5 3.580293634202116E-5 0.0 1.5006442738394745 0.0 54-55 3.580293634202116E-5 3.580293634202116E-5 0.0 1.7705805123901432 0.0 56-57 3.580293634202116E-5 3.580293634202116E-5 0.0 2.0831043437196457 0.0 58-59 3.580293634202116E-5 3.580293634202116E-5 0.0 2.4180408131992537 0.0 60-61 3.580293634202116E-5 3.580293634202116E-5 0.0 2.7914654392465343 0.0 62-63 3.580293634202116E-5 3.580293634202116E-5 0.0 3.1719611452213643 0.0 64-65 3.580293634202116E-5 3.580293634202116E-5 0.0 3.5773756948902404 0.0 66-67 3.580293634202116E-5 3.580293634202116E-5 0.0 4.054807851011093 0.0 68-69 3.580293634202116E-5 3.580293634202116E-5 0.0 4.583653023719087 0.0 70-71 3.580293634202116E-5 3.580293634202116E-5 0.0 5.146099252184069 0.0 72-73 3.580293634202116E-5 3.580293634202116E-5 0.0 5.727037697269704 0.0 74-75 3.580293634202116E-5 3.580293634202116E-5 0.0 6.322798558000936 0.0 76-77 3.580293634202116E-5 3.580293634202116E-5 0.0 6.972979881972041 0.0 78-79 3.580293634202116E-5 3.580293634202116E-5 0.0 7.700173322014832 0.0 80-81 3.580293634202116E-5 3.580293634202116E-5 0.0 8.46555059366639 0.0 82-83 3.580293634202116E-5 3.580293634202116E-5 0.0 9.254271379812945 1.790146817101058E-5 84-85 3.580293634202116E-5 3.580293634202116E-5 0.0 10.045373061226243 3.580293634202116E-5 86 3.580293634202116E-5 3.580293634202116E-5 0.0 10.656708199266255 3.580293634202116E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2925 0.0 47.042397 1 GTATCAA 5475 0.0 43.28797 1 TCAACGC 6930 0.0 33.62638 4 ATCAACG 7090 0.0 32.86753 3 TATCAAC 7170 0.0 32.373432 2 CAACGCA 7190 0.0 32.346603 5 AACGCAG 7490 0.0 31.413416 6 ACGCAGA 8840 0.0 25.991192 7 GTACATG 11270 0.0 25.194479 1 CGCAGAG 9150 0.0 24.708765 8 TACATGG 11450 0.0 24.318714 2 ACATGGG 12010 0.0 22.34408 3 GCAGAGT 10330 0.0 21.486341 9 GTATAGG 670 0.0 20.605852 1 TATACCG 210 1.2039582E-6 19.659517 5 CATGGGG 8465 0.0 19.61694 4 GTGGTAT 1655 0.0 18.630346 1 GAGTACA 8195 0.0 18.250658 1 AGAGTAC 8850 0.0 18.136354 10-11 CAGAGTA 9565 0.0 17.787468 10-11 >>END_MODULE