##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920882_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4967649 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.637937181149475 31.0 30.0 33.0 22.0 34.0 2 28.67699126890809 31.0 28.0 34.0 18.0 34.0 3 28.75423746726067 31.0 28.0 34.0 22.0 34.0 4 32.230532591976605 35.0 32.0 37.0 22.0 37.0 5 32.20225100444899 35.0 32.0 37.0 22.0 37.0 6 32.31996825862697 35.0 33.0 37.0 23.0 37.0 7 32.15420674850417 35.0 32.0 37.0 22.0 37.0 8 32.09257497862671 35.0 32.0 37.0 22.0 37.0 9 33.36925676512169 37.0 33.0 39.0 22.0 39.0 10-11 33.172298606443405 37.0 32.5 39.0 19.0 39.0 12-13 33.00838696534316 37.0 32.0 39.0 18.0 39.0 14-15 33.79060225470842 38.0 33.0 40.0 17.0 41.0 16-17 33.681855441074845 38.0 32.5 40.0 17.0 41.0 18-19 33.5641379855944 38.0 32.0 40.0 17.5 41.0 20-21 33.46638138081012 38.0 32.0 40.0 17.5 41.0 22-23 33.249772981142584 38.0 32.0 40.0 16.0 41.0 24-25 33.06450979125135 38.0 32.0 40.0 14.0 41.0 26-27 33.11869286658538 38.0 32.0 40.0 11.5 41.0 28-29 32.96504543698639 38.0 32.0 40.0 10.0 41.0 30-31 32.72606065766724 38.0 31.5 40.0 9.5 41.0 32-33 32.49432669256624 38.0 31.0 40.0 9.0 41.0 34-35 32.17199906837218 37.0 30.5 40.0 7.5 41.0 36-37 31.875793559488603 37.0 30.0 40.0 4.5 41.0 38-39 31.687827582021193 37.0 30.0 40.0 2.0 41.0 40-41 31.500893581652004 37.0 30.0 40.0 2.0 41.0 42-43 31.278595267097174 37.0 30.0 40.0 2.0 41.0 44-45 31.014207525531695 36.5 29.5 40.0 2.0 41.0 46-47 30.77922977247386 36.0 29.0 39.5 2.0 41.0 48-49 30.497360220096066 36.0 28.0 39.0 2.0 40.0 50-51 29.359922369716543 34.5 26.5 38.0 2.0 39.5 52-53 29.804983705571793 35.0 28.0 38.5 2.0 39.5 54-55 30.4610840057339 36.0 28.0 39.0 2.0 40.0 56-57 30.42183918388759 36.0 28.0 39.0 2.0 41.0 58-59 30.1877823896173 35.5 28.0 39.0 2.0 41.0 60-61 29.873539777065567 35.0 28.0 39.0 2.0 40.5 62-63 29.48860316016691 35.0 27.5 39.0 2.0 40.0 64-65 29.07688667214612 34.5 26.5 38.0 2.0 40.0 66-67 28.699842319777424 34.0 26.0 38.0 2.0 40.0 68-69 28.267853364841194 34.0 26.0 37.0 2.0 40.0 70-71 27.94271978555651 34.0 26.0 37.0 2.0 39.0 72-73 27.489259808814992 33.5 25.0 36.0 2.0 39.0 74-75 27.052482874695855 33.0 24.0 36.0 2.0 39.0 76-77 26.639675327302715 33.0 23.0 35.0 2.0 37.5 78-79 26.18431676634158 33.0 21.5 35.0 2.0 37.0 80-81 25.748046711834913 32.0 20.0 35.0 2.0 36.5 82-83 25.275560229798845 32.0 18.5 35.0 2.0 36.0 84-85 24.887266391003067 32.0 17.0 35.0 2.0 36.0 86-87 24.443103770012733 31.5 9.0 34.5 2.0 35.0 88-89 23.931540151085553 31.0 4.5 34.0 2.0 35.0 90-91 23.454707951387064 31.0 2.0 34.0 2.0 35.0 92-93 22.943697410988577 31.0 2.0 34.0 2.0 35.0 94-95 22.333204097149377 30.0 2.0 34.0 2.0 35.0 96-97 21.708043784897043 30.0 2.0 34.0 2.0 35.0 98 21.324143271797183 30.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 256192.0 3 43607.0 4 31529.0 5 25208.0 6 23266.0 7 23437.0 8 26988.0 9 31062.0 10 34244.0 11 36516.0 12 37903.0 13 37983.0 14 35885.0 15 36904.0 16 39823.0 17 42586.0 18 43683.0 19 43407.0 20 44976.0 21 48114.0 22 51877.0 23 58415.0 24 66458.0 25 76251.0 26 88500.0 27 102151.0 28 118559.0 29 137768.0 30 160488.0 31 189654.0 32 226206.0 33 275501.0 34 344434.0 35 440136.0 36 568326.0 37 651319.0 38 422038.0 39 46252.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.34609295842159 17.795778908607684 12.842012392246824 25.016115740723897 2 15.937025497992405 19.496229757181823 39.526066312539626 25.04067843228614 3 19.199703949010935 23.66024041659754 28.900850300963697 28.23920533342783 4 13.07926539540083 15.63317929744818 36.72727031123409 34.560284995916895 5 14.428688123711 36.83829979927688 34.29709558540014 14.435916491611971 6 33.72487691022465 35.0116792580364 17.373512960946115 13.889930870792835 7 29.644663489444838 31.194671512698385 20.97308676610132 18.187578231755452 8 26.65351620765887 34.604088037209436 19.990046560114127 18.752349195017562 9 27.01799181061303 15.654970792018519 19.272355997776817 38.05468139959164 10-11 25.624332241770375 25.27668277590147 27.78344276642012 21.31554221590803 12-13 26.36856939500633 22.490334130908245 27.599406886912227 23.541689587173202 14-15 23.427328197251317 24.114287554831733 24.991182634218223 27.467201613698723 16-17 23.8070298947382 27.074641120006344 25.601746934821513 23.516582050433946 18-19 23.701777106426015 26.382489801680265 26.89621688000388 23.01951621188984 20-21 24.463667729446136 25.733805372348208 26.608896080636395 23.193630817569264 22-23 24.18557139139452 25.562859849013407 26.36231442654322 23.889254333048846 24-25 23.87223794695855 25.71629746633053 26.505959783059406 23.905504803651517 26-27 23.725852889675718 25.983098533667153 26.376615951657833 23.914432624999296 28-29 23.820890032989286 26.05948263507838 26.387885014754392 23.731742317177947 30-31 24.003612506693138 25.802655341463556 26.24881079425701 23.9449213575863 32-33 23.779392626628738 25.878256531032047 26.22268625384832 24.119664588490895 34-35 24.167596323225983 25.90482700308418 26.141760657419184 23.785816016270655 36-37 24.193172406578256 25.72283184845071 26.10157151566892 23.98242422930211 38-39 24.058095329785463 25.85312358925153 26.164145590050857 23.92463549091215 40-41 24.19866875726236 25.61711292078961 26.293980866457723 23.890237455490308 42-43 24.06713581460947 25.576555434072368 26.179959371421546 24.176349379896617 44-45 23.96527164748964 25.720355105590297 26.18058359276348 24.133789654156583 46-47 23.993471582181257 25.72464427197025 26.080574419920772 24.20130972592772 48-49 24.019506299835594 25.65520008002999 26.134763633644525 24.190529986489885 50-51 23.86111172580288 25.858169491032186 26.185646950621926 24.09507183254301 52-53 23.934508407619717 25.729928926110496 26.222530350176616 24.11303231609318 54-55 23.67932087577986 25.55750863085714 26.418132357840467 24.345038135522532 56-57 23.669775495207375 25.660389373446556 26.448688156566092 24.221146974779977 58-59 23.6777541558377 25.43821191750458 26.46928332543016 24.41475060122756 60-61 23.667477916045293 25.474776977175246 26.571641527639382 24.286103579140075 62-63 23.558737044476786 25.504388599958144 26.58885327039704 24.348021085168035 64-65 23.46039175909816 25.327463498557414 26.554379890012385 24.65776485233204 66-67 23.438047990796484 25.424487449734013 26.455787167099697 24.681677392369807 68-69 23.58308191237664 25.221574035508244 26.530950727489326 24.664393324625784 70-71 23.389507635412816 25.12885646260407 26.57943184248552 24.902204059497596 72-73 23.427469009693034 25.125474896485166 26.597779003168654 24.849277090653143 74-75 23.39239178813814 25.26378757499041 26.52424149110538 24.81957914576607 76-77 23.43719733628664 25.07936543203942 26.642152946786936 24.841284284887006 78-79 23.35781174066744 25.07465318384922 26.692977066364175 24.87455800911916 80-81 23.43998971324665 25.11032452060386 26.69710470923003 24.75258105691946 82-83 23.467871766443032 25.055100246035817 26.65203521688756 24.824992770633592 84-85 23.426430254880067 24.967340290637576 26.69269410331397 24.913535351168388 86-87 23.380861143899125 24.918773919429547 26.785216550366837 24.91514838630449 88-89 23.399312628255796 24.740745350864813 26.83259476114706 25.027347259732334 90-91 23.298237504825785 24.77717546224008 26.952814471034277 24.971772561899858 92-93 23.466750187710247 24.58687080707225 26.928234186434402 25.018144818783107 94-95 23.393415645508433 24.49274741631378 27.01890952461951 25.094927413558278 96-97 23.50261308380252 24.317305341923078 26.987297200656958 25.19278437361745 98 23.48889167208717 24.215973044275746 26.887324911016215 25.40781037262087 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 55.0 2 99.5 3 154.0 4 175.0 5 208.0 6 334.5 7 623.0 8 943.5 9 1156.5 10 1279.0 11 1392.0 12 1613.5 13 1949.0 14 2149.0 15 2322.0 16 2547.0 17 2633.0 18 2663.5 19 2644.5 20 2617.5 21 2671.0 22 2888.5 23 3354.5 24 4109.5 25 5197.5 26 6675.0 27 8902.0 28 12030.0 29 16640.0 30 23607.0 31 33231.5 32 43821.5 33 54773.0 34 67104.0 35 81791.0 36 97460.0 37 111600.0 38 124675.0 39 138005.0 40 150834.5 41 162344.0 42 174470.5 43 186628.0 44 196950.0 45 205540.0 46 212233.0 47 220265.5 48 226019.5 49 224786.5 50 223080.0 51 221515.5 52 218475.0 53 215591.5 54 207595.5 55 194836.0 56 178781.5 57 160270.0 58 143309.0 59 124472.0 60 104509.5 61 86506.0 62 70864.5 63 55275.5 64 40610.0 65 29989.5 66 22578.0 67 17116.5 68 12443.0 69 9163.0 70 6975.5 71 5569.0 72 4609.0 73 3462.5 74 2487.5 75 1673.0 76 1087.5 77 645.0 78 359.0 79 214.5 80 130.5 81 89.5 82 57.5 83 43.5 84 32.5 85 23.5 86 19.0 87 16.0 88 13.5 89 10.0 90 7.0 91 5.5 92 5.0 93 4.0 94 4.0 95 3.0 96 1.5 97 1.5 98 3.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3839039352418015 2 0.025323850376707372 3 0.0188620411788353 4 0.016929537493490382 5 0.02226405287491125 6 0.023190044224139023 7 0.01682888625987867 8 0.010507988789062997 9 0.0 10-11 3.0195370083514355E-5 12-13 0.006029008893341699 14-15 0.00360331416329938 16-17 0.0064416789511497295 18-19 0.03784486383800466 20-21 0.07921252085241932 22-23 0.09844697159561797 24-25 0.06539310647753092 26-27 0.07450204311939108 28-29 0.05748191951565016 30-31 0.05385847510562844 32-33 0.02080460998754139 34-35 0.3401206486207057 36-37 0.5179915086593276 38-39 0.4723562393397762 40-41 0.48156582721524804 42-43 0.43032428418352425 44-45 0.4047488057227876 46-47 0.40359131653625285 48-49 0.39262033207257596 50-51 0.38991281388842086 52-53 0.4503740099189778 54-55 0.4520548855202934 56-57 0.42241309722164344 58-59 0.408060231308613 60-61 0.42188971080686255 62-63 0.40261499957021923 64-65 0.450212967945199 66-67 0.4720744158856634 68-69 0.41469314760362497 70-71 0.3712118146833643 72-73 0.35740246543183707 74-75 0.3408554026260712 76-77 0.33851022888291826 78-79 0.33728228383285536 80-81 0.35416149570953986 82-83 0.34933023649617756 84-85 0.34946108309987284 86-87 0.33522899866717637 88-89 0.3784184430099631 90-91 0.3558625015575778 92-93 0.34624024362429795 94-95 0.3533059602238403 96-97 0.353467002197619 98 0.3484344405170333 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4967649.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.97329540025512 #Duplication Level Percentage of deduplicated Percentage of total 1 74.65035367005959 39.54475236697586 2 12.300531584243345 13.031993863845818 3 4.9940018640146615 7.9364620791562 4 2.5206091432583446 5.34099890937633 5 1.448574716214645 3.8367888175689555 6 0.9349017469058885 2.9714895845436105 7 0.6475617501462764 2.4012435916283428 8 0.43672539598099935 1.8507826728075893 9 0.3317047004700267 1.581434197528668 >10 1.6126908129779742 14.99292600524662 >50 0.08989285543146093 3.2328696638009933 >100 0.03142015449801588 2.7970564058199434 >500 8.023604036144585E-4 0.2999948520848374 >1k 2.2924539513274325E-4 0.18120698961627918 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.0130246722342903E-5 0.0 0.0 0.0 0.0 3 2.0130246722342903E-5 0.0 0.0 0.0 0.0 4 2.0130246722342903E-5 0.0 0.0 2.0130246722342903E-5 0.0 5 4.0260493444685805E-5 0.0 0.0 2.0130246722342903E-5 0.0 6 4.0260493444685805E-5 0.0 0.0 2.0130246722342903E-5 0.0 7 4.0260493444685805E-5 0.0 0.0 2.0130246722342903E-5 0.0 8 6.039074016702871E-5 0.0 0.0 2.0130246722342903E-5 0.0 9 6.039074016702871E-5 0.0 0.0 4.0260493444685805E-5 0.0 10-11 8.052098688937161E-5 0.0 0.0 4.0260493444685805E-5 1.0065123361171451E-5 12-13 1.0065123361171451E-4 0.0 0.0 1.2078148033405742E-4 1.6104197377874322E-4 14-15 1.4091172705640032E-4 0.0 0.0 1.4091172705640032E-4 2.6169320739045774E-4 16-17 1.5097685041757177E-4 0.0 0.0 2.2143271394577194E-4 3.321490709186579E-4 18-19 2.2143271394577194E-4 0.0 0.0 3.12018824196315E-4 3.724095643633437E-4 20-21 2.717583307516292E-4 0.0 0.0 4.026049344468581E-4 4.026049344468581E-4 22-23 3.0195370083514354E-4 0.0 0.0 5.435166615032584E-4 4.7306079797505824E-4 24-25 3.724095643633437E-4 0.0 0.0 0.0010165774594783166 5.032561680585726E-4 26-27 3.8247468772451514E-4 0.0 0.0 0.0015097685041757175 5.032561680585726E-4 28-29 4.126700578080295E-4 0.0 0.0 0.004499110142443639 5.032561680585726E-4 30-31 4.428654278915439E-4 0.0 0.0 0.02191177355727025 5.032561680585726E-4 32-33 4.629956746138868E-4 0.0 0.0 0.06066249849778034 5.13321291419744E-4 34-35 5.032561680585726E-4 0.0 0.0 0.10969977951340765 5.636469082256013E-4 36-37 5.837771549479442E-4 0.0 0.0 0.19195196762090078 5.636469082256013E-4 38-39 6.642981418373158E-4 0.0 0.0 0.3353699103942328 5.636469082256013E-4 40-41 6.642981418373158E-4 0.0 0.0 0.5018873112814533 5.737120315867728E-4 42-43 7.14623758643173E-4 0.0 0.0 0.6790536126847931 5.837771549479442E-4 44-45 7.649493754490303E-4 0.0 0.0 0.8906325708599783 5.938422783091156E-4 46-47 0.0010065123361171452 0.0 0.0 1.142341175876154 6.139725250314586E-4 48-49 0.0010870333230065168 0.0 0.0 1.4176222998041932 6.441678951149729E-4 50-51 0.0010870333230065168 0.0 0.0 1.7193243725553073 6.642981418373158E-4 52-53 0.0010970984463676882 0.0 0.0 2.0291691301056094 7.548842520878588E-4 54-55 0.0011071635697288596 0.0 0.0 2.371685278086274 8.052098688937161E-4 56-57 0.0011071635697288596 0.0 0.0 2.7677277521016483 8.052098688937161E-4 58-59 0.0011071635697288596 0.0 0.0 3.1899294817327073 8.052098688937161E-4 60-61 0.0011071635697288596 0.0 0.0 3.6502176381624385 8.25340115616059E-4 62-63 0.0011474240631735456 0.0 0.0 4.11522633744856 9.058611025054307E-4 64-65 0.0011675543098958884 0.0 0.0 4.611869719458843 9.461215959501165E-4 66-67 0.0012883357902299458 0.0 0.0 5.171742206424005 9.461215959501165E-4 68-69 0.0012883357902299458 0.0 0.0 5.7868218950251915 9.56186719311288E-4 70-71 0.0013285962836746316 0.0 0.0 6.443460477984656 0.0010165774594783166 72-73 0.001358791653758146 0.0 0.0 7.109791774740929 0.0010870333230065168 74-75 0.0013889870238416604 0.0 0.0 7.795075698786287 0.0011071635697288596 76-77 0.0013889870238416604 0.0 0.0 8.530554393033807 0.0011272938164512026 78-79 0.0013990521472028318 0.0 0.0 9.337998719313703 0.001137358939812374 80-81 0.0015701592443427463 0.0 0.0 10.17964433477486 0.0011474240631735456 82-83 0.0016104197377874321 0.0 2.0130246722342903E-5 11.03781688279506 0.0012078148033405742 84-85 0.0016204848611486035 1.0065123361171451E-5 2.0130246722342903E-5 11.898143367214551 0.0012078148033405742 86 0.0016305499845097752 2.0130246722342903E-5 2.0130246722342903E-5 12.56093174054769 0.0012078148033405742 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6920 0.0 43.297623 1 GGTATCA 3975 0.0 42.724636 1 ATCAACG 8930 0.0 33.022903 3 TCAACGC 8980 0.0 32.839035 4 CAACGCA 8955 0.0 32.828285 5 AACGCAG 9615 0.0 30.951462 6 TATCAAC 9845 0.0 30.326412 2 GTACATG 15170 0.0 27.001852 1 TACATGG 15480 0.0 26.04196 2 ACGCAGA 11335 0.0 25.725021 7 ACATGGG 15800 0.0 24.904964 3 CGCAGAG 11880 0.0 24.15798 8 CATGGGG 11290 0.0 21.895283 4 GCAGAGT 13600 0.0 20.05748 9 AGAGTAC 11865 0.0 18.373507 10-11 GAGTACA 11345 0.0 18.296211 1 GTATTAA 2425 0.0 17.460844 1 AGTACAT 10855 0.0 17.364717 2 GTGTAAG 1925 0.0 16.736185 1 CAGAGTA 13030 0.0 16.062222 10-11 >>END_MODULE