##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920881_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4384034 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.22857304482584 31.0 28.0 33.0 16.0 34.0 2 28.251072642228596 31.0 28.0 33.0 16.0 34.0 3 28.322945260004825 31.0 28.0 34.0 16.0 34.0 4 31.75471563404846 35.0 32.0 37.0 19.0 37.0 5 31.699383262082364 35.0 32.0 37.0 19.0 37.0 6 31.815154718234393 35.0 32.0 37.0 19.0 37.0 7 31.64124023673174 35.0 32.0 37.0 17.0 37.0 8 31.571677591916487 35.0 32.0 37.0 17.0 37.0 9 32.813549803673965 37.0 32.0 39.0 17.0 39.0 10-11 32.60181467570735 37.0 32.0 39.0 17.0 39.0 12-13 32.4178459838587 37.0 32.0 39.0 16.0 39.0 14-15 33.15349059792876 38.0 32.0 40.0 13.0 41.0 16-17 33.02820587157855 38.0 32.0 40.0 10.5 41.0 18-19 32.8891197011702 38.0 32.0 40.0 10.0 41.0 20-21 32.784046496902164 38.0 32.0 40.0 10.0 41.0 22-23 32.549494597897734 38.0 31.0 40.0 10.0 41.0 24-25 32.351065936076225 37.5 31.0 40.0 8.5 41.0 26-27 32.39389863308541 38.0 31.0 40.0 8.0 41.0 28-29 32.231315496184564 38.0 31.0 40.0 8.0 41.0 30-31 31.981002086206452 37.0 30.0 40.0 2.0 41.0 32-33 31.741515348649212 37.0 30.0 40.0 2.0 41.0 34-35 31.408704061145514 37.0 30.0 40.0 2.0 41.0 36-37 31.10208349205321 37.0 30.0 40.0 2.0 41.0 38-39 30.902863549872105 36.5 29.0 40.0 2.0 41.0 40-41 30.69955308284562 36.0 29.0 40.0 2.0 41.0 42-43 30.4640627787102 36.0 28.0 39.0 2.0 41.0 44-45 30.18738723285449 36.0 28.0 39.0 2.0 40.0 46-47 29.935220735058166 35.5 27.0 39.0 2.0 40.0 48-49 29.631364629015195 35.0 26.5 39.0 2.0 40.0 50-51 28.507748343192596 34.0 25.0 38.0 2.0 39.5 52-53 28.959650290120926 34.5 26.5 38.5 2.0 39.5 54-55 29.58806740549914 35.0 27.0 39.0 2.0 40.0 56-57 29.531023710126334 35.0 27.0 39.0 2.0 40.0 58-59 29.27945859908933 35.0 26.5 39.0 2.0 40.0 60-61 28.94293509128807 35.0 26.0 39.0 2.0 40.0 62-63 28.54201461485016 34.0 26.0 38.0 2.0 40.0 64-65 28.10850611560038 34.0 25.0 38.0 2.0 40.0 66-67 27.719661959738453 34.0 23.5 37.0 2.0 40.0 68-69 27.274463085824607 33.5 22.5 37.0 2.0 39.0 70-71 26.94492994351777 33.0 22.0 36.0 2.0 39.0 72-73 26.48381593299687 33.0 21.5 36.0 2.0 39.0 74-75 26.041840688279336 32.5 20.0 35.0 2.0 38.0 76-77 25.631388693609587 32.0 18.5 35.0 2.0 37.0 78-79 25.17424340230938 32.0 17.0 35.0 2.0 37.0 80-81 24.73984074941025 32.0 11.5 35.0 2.0 36.0 82-83 24.280935093112873 31.0 7.0 35.0 2.0 36.0 84-85 23.89587706208483 31.0 2.0 34.0 2.0 35.0 86-87 23.445730804095042 31.0 2.0 34.0 2.0 35.0 88-89 22.928459268335963 30.5 2.0 34.0 2.0 35.0 90-91 22.444672760293372 30.0 2.0 34.0 2.0 35.0 92-93 21.914782253057346 30.0 2.0 34.0 2.0 35.0 94-95 21.29258315514889 29.0 2.0 34.0 2.0 35.0 96-97 20.655884055643728 29.0 2.0 34.0 2.0 35.0 98 20.25991837654544 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 271019.0 3 43757.0 4 31628.0 5 25496.0 6 23720.0 7 23847.0 8 27525.0 9 31117.0 10 33644.0 11 35840.0 12 36256.0 13 35594.0 14 33748.0 15 34914.0 16 37429.0 17 39753.0 18 41098.0 19 41445.0 20 42439.0 21 45717.0 22 49046.0 23 54805.0 24 62171.0 25 71505.0 26 81908.0 27 94897.0 28 109393.0 29 126244.0 30 146859.0 31 171572.0 32 203167.0 33 246240.0 34 305009.0 35 385349.0 36 486931.0 37 525422.0 38 299351.0 39 28179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.7565007922769 17.249287866714294 12.722043616446385 25.272167724562415 2 16.352129080685696 18.872643021495573 38.9369825883899 25.838245309428824 3 19.71007681549907 22.574083495504457 28.076874816060304 29.638964872936167 4 13.53108494336744 15.113757898079639 35.284134669786354 36.071022488766566 5 15.329043026799319 35.93889564343076 33.45782021186573 15.274241117904186 6 35.17426699173325 33.664126456559764 16.73762098167006 14.42398557003693 7 31.050177475537943 30.2842003996422 19.858051508171357 18.8075706166485 8 27.3946225116313 34.06329664012483 19.306399126754105 19.235681721489765 9 27.289044747371943 15.522507352817064 18.67754675260274 38.51090114720825 10-11 26.463590243773368 24.728634446243653 26.907428346195545 21.900346963787438 12-13 26.894086846452314 21.90659256495714 26.914137968830428 24.285182619760118 14-15 23.898706688846296 23.611588077061477 24.22655385241802 28.263151381674206 16-17 24.558733592727595 26.57140387011004 24.784165711826013 24.08569682533636 18-19 24.412214658406974 25.7891492470545 26.146651611293446 23.651984483245077 20-21 25.09364988707227 25.21317476427165 25.83634314140414 23.856832207251937 22-23 24.848934501771826 24.908115211965463 25.653696265736002 24.58925402052671 24-25 24.694689400987293 25.050236506442413 25.78139336576833 24.473680726801962 26-27 24.45515393996253 25.36195336632923 25.695051014672387 24.48784167903585 28-29 24.467646860130948 25.417645764636713 25.82526091020964 24.289446465022696 30-31 24.55102167266742 25.23533941856669 25.640970927649864 24.57266798111602 32-33 24.55553317197382 25.239706486602287 25.5456948653407 24.659065476083196 34-35 24.85180658131095 25.2694912152793 25.37666172946088 24.50204047394887 36-37 24.946880625340057 24.973099252694603 25.461107354674635 24.61891276729071 38-39 24.63897105030479 25.121901414551438 25.553701480647263 24.68542605449651 40-41 24.76125612438163 24.999131902961537 25.67468902930478 24.564922943352055 42-43 24.81294727198879 24.893000639373152 25.47422084558073 24.819831243057326 44-45 24.542285951885244 25.067273925085836 25.587612642814307 24.802827480214614 46-47 24.629971959253144 25.065590063221364 25.445451889798846 24.858986087726645 48-49 24.677961312076217 25.01279544305896 25.48193878843242 24.827304456432405 50-51 24.49778215000866 25.12529040547594 25.585095974780593 24.791831469734802 52-53 24.596885894414612 25.046289984613924 25.53919440189628 24.817629719075185 54-55 24.28806862999503 24.855723376576506 25.777205708396988 25.07900228503147 56-57 24.225393828622842 25.01179120755022 25.924495955942227 24.838319007884703 58-59 24.32910431045184 24.76700446019379 25.88086193462566 25.023029294728712 60-61 24.33159719736688 24.805112772482197 26.033770182938525 24.8295198472124 62-63 24.197499196992485 24.86355170366418 25.891813560263355 25.047135539079985 64-65 24.101921896249888 24.693451722548648 25.90815403352816 25.29647234767331 66-67 24.072676520501577 24.8274127438297 25.8408894806741 25.259021254994618 68-69 24.000937733918114 24.596046033710778 26.074614667862615 25.32840156450849 70-71 23.940615925579188 24.513022062168606 26.099141814358713 25.447220197893493 72-73 24.037857532681116 24.534861840105197 26.00899165619723 25.418288971016455 74-75 23.96452375560031 24.64315873569731 25.97615576515293 25.41616174354945 76-77 24.075781970339925 24.48212056401495 26.0304918165236 25.411605649121526 78-79 24.01034894502146 24.458434735798182 26.098757169887627 25.432459149292736 80-81 23.88197118045187 24.618558239708584 26.168338328039514 25.331132251800035 82-83 23.969625898674558 24.512126841756366 26.081396658377315 25.436850601191765 84-85 23.93553250928805 24.357859627850836 26.169906205610587 25.536701657250525 86-87 23.97791423427349 24.213973621725245 26.321285431938442 25.486826712062822 88-89 23.968502455014303 24.16464944264169 26.32353708898774 25.543311013356266 90-91 23.846609307842538 24.237317604124307 26.448565172856515 25.46750791517664 92-93 23.988345928210745 23.98709843849767 26.424521664947843 25.600033968343748 94-95 23.857323159342556 23.96521016161418 26.54399107969297 25.633475599350298 96-97 24.00959651794872 23.86852848240896 26.48438196577077 25.63749303387155 98 24.02710308484032 23.81882382994854 26.36759514486613 25.786477940345016 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 48.5 2 80.5 3 137.5 4 144.5 5 163.5 6 263.5 7 520.5 8 823.5 9 958.0 10 994.0 11 1113.5 12 1299.0 13 1543.0 14 1796.0 15 1999.5 16 2172.0 17 2222.5 18 2206.0 19 2204.5 20 2174.0 21 2188.5 22 2256.5 23 2451.0 24 2793.0 25 3401.5 26 4429.5 27 5715.5 28 7558.5 29 10480.5 30 14919.0 31 21084.0 32 28274.0 33 36408.5 34 45426.5 35 55688.0 36 66971.5 37 78305.5 38 88863.5 39 99957.0 40 113396.5 41 126670.5 42 139675.5 43 150189.0 44 159388.5 45 169270.5 46 178205.5 47 188614.5 48 197455.5 49 201331.0 50 202144.0 51 203512.5 52 206013.5 53 205352.0 54 200433.5 55 193050.0 56 180082.0 57 165273.5 58 150586.0 59 131478.5 60 110657.0 61 91690.5 62 75973.5 63 60659.5 64 45781.0 65 34175.0 66 26368.0 67 20622.0 68 14992.0 69 10982.5 70 8388.5 71 6736.5 72 5399.5 73 3853.5 74 2923.5 75 2018.5 76 1146.5 77 637.0 78 350.5 79 207.5 80 131.5 81 83.0 82 48.0 83 28.0 84 26.5 85 19.5 86 14.0 87 15.0 88 13.0 89 9.0 90 6.5 91 6.5 92 6.5 93 8.0 94 6.5 95 3.5 96 2.5 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38489664998036055 2 0.023699633716344353 3 0.018339273828624506 4 0.015738929032028493 5 0.022239791023518522 6 0.021258959214276167 7 0.013982555792222415 8 0.008873106367332005 9 0.0 10-11 6.843012622621083E-5 12-13 0.005463005077059165 14-15 0.002999520532915575 16-17 0.005269119719418234 18-19 0.035252920027536286 20-21 0.07655050120505452 22-23 0.09645226291584418 24-25 0.06291009604396317 26-27 0.07268419907327361 28-29 0.05588460308473885 30-31 0.050740938596735334 32-33 0.01963944622692251 34-35 0.3382387089151225 36-37 0.5162140622084591 38-39 0.4715291897827435 40-41 0.47998031037168054 42-43 0.42930780190117135 44-45 0.404729981564924 46-47 0.4039544401343602 48-49 0.3933591755903353 50-51 0.389584113626856 52-53 0.44933501884337573 54-55 0.4507606464730885 56-57 0.42182610810043897 58-59 0.4072961112984069 60-61 0.42190594324770286 62-63 0.4022893070628558 64-65 0.44873055272837753 66-67 0.469635956290485 68-69 0.4149146653515917 70-71 0.3725107971334164 72-73 0.3595318831925117 74-75 0.3414549248477544 76-77 0.3397441716920991 78-79 0.339709956628986 80-81 0.355277810345449 82-83 0.3507728270355568 84-85 0.35087547222489607 86-87 0.33746316748455873 88-89 0.3796959603871685 90-91 0.3577869149737433 92-93 0.34809264709169685 94-95 0.35525500030337354 96-97 0.35525500030337354 98 0.35081844711970755 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4384034.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.5014219029761 #Duplication Level Percentage of deduplicated Percentage of total 1 74.77480158493537 37.762338025521466 2 11.52091550983164 11.63645229741097 3 4.972362489363087 7.533341277895731 4 2.579245917805962 5.210223451465907 5 1.586467949296647 4.005944362148963 6 1.027568502676409 3.1136202292722444 7 0.6736558135835479 2.3814403521422753 8 0.5067097585541249 2.047165063927761 9 0.3577255043957182 1.6259081960648785 >10 1.8556691705189317 16.36920864604674 >50 0.100092897701741 3.434932756116402 >100 0.0424161444446392 3.7999885204794754 >500 0.001776567806070302 0.5899612224531352 >1k 5.921890860467913E-4 0.4894755990541415 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 1.1405021037701807E-5 16-17 0.0 0.0 0.0 0.0 3.421506311310542E-5 18-19 0.0 0.0 0.0 2.2810042075403613E-5 4.5620084150807227E-5 20-21 0.0 0.0 0.0 5.702510518850903E-5 4.5620084150807227E-5 22-23 0.0 0.0 0.0 1.3686025245242167E-4 4.5620084150807227E-5 24-25 2.2810042075403613E-5 0.0 0.0 4.219857783949668E-4 4.5620084150807227E-5 26-27 2.2810042075403613E-5 0.0 0.0 9.694267882046536E-4 4.5620084150807227E-5 28-29 2.2810042075403613E-5 0.0 0.0 0.004983994193475689 4.5620084150807227E-5 30-31 2.2810042075403613E-5 0.0 0.0 0.021452844571917096 4.5620084150807227E-5 32-33 2.2810042075403613E-5 0.0 0.0 0.055359972117004566 6.843012622621083E-5 34-35 2.2810042075403613E-5 0.0 0.0 0.10279345461280638 6.843012622621083E-5 36-37 2.2810042075403613E-5 0.0 0.0 0.18025635750087704 6.843012622621083E-5 38-39 2.2810042075403613E-5 0.0 0.0 0.3139117990417045 6.843012622621083E-5 40-41 2.2810042075403613E-5 1.1405021037701807E-5 0.0 0.4677199127561511 6.843012622621083E-5 42-43 3.421506311310542E-5 2.2810042075403613E-5 0.0 0.6285421144087842 6.843012622621083E-5 44-45 4.5620084150807227E-5 2.2810042075403613E-5 0.0 0.8205912636626449 6.843012622621083E-5 46-47 4.5620084150807227E-5 2.2810042075403613E-5 0.0 1.0511095488766737 6.843012622621083E-5 48-49 4.5620084150807227E-5 2.2810042075403613E-5 0.0 1.3007996744550794 6.843012622621083E-5 50-51 4.5620084150807227E-5 2.2810042075403613E-5 0.0 1.5786145819124577 6.843012622621083E-5 52-53 4.5620084150807227E-5 2.2810042075403613E-5 0.0 1.8646753195800945 6.843012622621083E-5 54-55 4.5620084150807227E-5 2.2810042075403613E-5 0.0 2.1787239788742516 7.983514726391265E-5 56-57 4.5620084150807227E-5 2.2810042075403613E-5 0.0 2.5419282788409028 9.124016830161445E-5 58-59 4.5620084150807227E-5 2.2810042075403613E-5 0.0 2.935412909662653 9.124016830161445E-5 60-61 4.5620084150807227E-5 2.2810042075403613E-5 0.0 3.3618922663464748 9.124016830161445E-5 62-63 4.5620084150807227E-5 2.2810042075403613E-5 0.0 3.7892954297343495 9.124016830161445E-5 64-65 4.5620084150807227E-5 2.2810042075403613E-5 0.0 4.245530486305535 9.124016830161445E-5 66-67 6.843012622621083E-5 2.2810042075403613E-5 0.0 4.767960284979542 9.124016830161445E-5 68-69 6.843012622621083E-5 4.5620084150807227E-5 0.0 5.339956305083401 9.124016830161445E-5 70-71 6.843012622621083E-5 4.5620084150807227E-5 0.0 5.953865777500813 9.124016830161445E-5 72-73 6.843012622621083E-5 4.5620084150807227E-5 0.0 6.570455429862086 9.124016830161445E-5 74-75 6.843012622621083E-5 4.5620084150807227E-5 0.0 7.2123186088429065 9.124016830161445E-5 76-77 6.843012622621083E-5 4.5620084150807227E-5 0.0 7.907066870375549 9.124016830161445E-5 78-79 6.843012622621083E-5 4.5620084150807227E-5 0.0 8.662375793618388 1.0264518933931626E-4 80-81 6.843012622621083E-5 4.5620084150807227E-5 0.0 9.45559500679055 1.1405021037701806E-4 82-83 6.843012622621083E-5 4.5620084150807227E-5 0.0 10.25100398400195 1.1405021037701806E-4 84-85 6.843012622621083E-5 4.5620084150807227E-5 0.0 11.05861633372369 1.1405021037701806E-4 86 6.843012622621083E-5 4.5620084150807227E-5 0.0 11.679174933406083 1.1405021037701806E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3460 0.0 42.432365 1 GTATCAA 5765 0.0 39.59725 1 TCAACGC 7500 0.0 30.271397 4 CAACGCA 7625 0.0 29.65484 5 ATCAACG 7605 0.0 29.551897 3 AACGCAG 8035 0.0 28.137156 6 GTACATG 13055 0.0 27.921001 1 TATCAAC 8080 0.0 27.871712 2 TACATGG 13725 0.0 25.832155 2 ACATGGG 14350 0.0 24.131458 3 ACGCAGA 9615 0.0 23.22439 7 CGCAGAG 10080 0.0 21.924334 8 ATACCGT 395 0.0 20.89751 6 CATGGGG 10365 0.0 20.886284 4 GAGTACA 9790 0.0 18.522354 1 AATACCG 365 1.9281288E-10 17.592344 5 GCAGAGT 11900 0.0 17.377579 9 AGTACAT 9710 0.0 16.721588 2 AGAGTAC 9810 0.0 16.546036 10-11 GTATTAG 885 0.0 16.121338 1 >>END_MODULE