##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920881_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4384034 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.157932853622942 31.0 30.0 34.0 26.0 34.0 2 30.167296832095737 31.0 30.0 34.0 26.0 34.0 3 30.30699214467771 31.0 30.0 34.0 26.0 34.0 4 33.9364861221423 35.0 35.0 37.0 30.0 37.0 5 33.44253876680701 35.0 35.0 37.0 28.0 37.0 6 33.37943592590751 35.0 35.0 37.0 28.0 37.0 7 33.184655274115116 35.0 33.0 37.0 27.0 37.0 8 33.11521032911698 35.0 33.0 37.0 26.0 37.0 9 34.44111199867519 38.0 34.0 39.0 27.0 39.0 10-11 34.24016887186551 37.5 34.0 39.0 26.5 39.0 12-13 34.05291416535547 37.0 34.0 39.0 25.5 39.0 14-15 34.94917979650705 38.0 34.0 40.0 25.0 41.0 16-17 34.818889520473604 38.0 33.5 40.0 25.0 41.0 18-19 34.71127653207069 38.0 33.5 40.0 25.0 41.0 20-21 34.58529199362961 38.0 34.0 40.0 24.0 41.0 22-23 34.430937693457665 38.0 33.0 40.0 23.5 41.0 24-25 34.25004333907994 38.0 33.0 40.0 22.5 41.0 26-27 34.06510955435108 38.0 33.0 40.0 21.5 41.0 28-29 34.006183004055174 38.0 33.0 40.0 21.0 41.0 30-31 34.00637517865965 38.0 33.0 40.0 21.0 41.0 32-33 33.86731067779128 38.0 33.0 40.0 19.0 41.0 34-35 33.69001198439611 38.0 33.0 40.0 18.5 41.0 36-37 33.5055942768692 38.0 32.0 40.0 18.0 41.0 38-39 33.32320997054311 38.0 32.0 40.0 16.0 41.0 40-41 33.09749069008133 38.0 32.0 40.0 15.5 41.0 42-43 33.132294252279976 38.0 32.0 40.0 15.0 41.0 44-45 32.98931144238389 38.0 32.0 40.0 14.5 41.0 46-47 32.75122090750209 37.5 31.0 40.0 10.5 41.0 48-49 32.486873048886025 37.0 31.0 40.0 9.0 41.0 50-51 32.22079071467055 37.0 31.0 40.0 8.0 41.0 52-53 31.94751831304228 37.0 30.5 40.0 7.0 41.0 54-55 31.652951254483884 36.0 30.0 39.5 4.0 41.0 56-57 31.31316956027257 36.0 30.0 39.0 2.0 41.0 58-59 30.967488162728664 35.0 29.0 39.0 2.0 40.0 60-61 30.618375336505146 35.0 29.0 39.0 2.0 40.0 62-63 30.277254008522746 35.0 28.0 38.5 2.0 40.0 64-65 29.851739744719133 34.5 28.0 38.0 2.0 40.0 66-67 29.40742715499013 34.0 28.0 37.5 2.0 40.0 68-69 28.95427031359702 34.0 27.0 37.0 2.0 39.0 70-71 28.518862079992992 34.0 26.0 36.0 2.0 39.0 72-73 28.06799422632215 33.5 26.0 36.0 2.0 39.0 74-75 27.620568065849852 33.0 26.0 35.0 2.0 38.0 76-77 26.20097323606523 31.5 24.0 34.0 2.0 36.0 78-79 27.02631834059681 32.5 25.0 35.0 2.0 37.0 80-81 27.04795035804923 33.0 25.5 35.0 2.0 36.0 82-83 26.717990097704533 33.0 25.0 35.0 2.0 36.0 84-85 26.40329158031165 33.0 24.5 35.0 2.0 35.5 86-87 25.864962383959615 32.0 23.0 35.0 2.0 35.0 88-89 25.496781959264002 32.0 20.5 35.0 2.0 35.0 90-91 25.1286016486186 32.0 19.5 34.0 2.0 35.0 92-93 24.80871293425188 32.0 18.0 34.0 2.0 35.0 94-95 24.41990002814759 31.5 13.5 34.0 2.0 35.0 96-97 23.871932676617014 31.0 2.0 34.0 2.0 35.0 98-99 23.247133576062595 31.0 2.0 34.0 2.0 35.0 100-101 21.046618023491604 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 116450.0 3 51480.0 4 26562.0 5 18919.0 6 16301.0 7 16113.0 8 17968.0 9 20707.0 10 23184.0 11 25565.0 12 28216.0 13 30787.0 14 33109.0 15 35452.0 16 36942.0 17 38161.0 18 37901.0 19 36825.0 20 37409.0 21 38633.0 22 42056.0 23 47335.0 24 54583.0 25 64553.0 26 76773.0 27 90500.0 28 107323.0 29 126148.0 30 147457.0 31 175397.0 32 209686.0 33 256881.0 34 322159.0 35 418259.0 36 557157.0 37 639544.0 38 340403.0 39 21136.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.84547765681549 18.56706154877033 13.367813528132494 25.219647266281687 2 16.46784673659009 19.934653791462384 37.68659184668732 25.910907625260204 3 19.436897717792295 23.424322180501985 28.49813308342255 28.640647018283165 4 13.992546038603008 16.105497941001147 34.77001287344805 35.1319431469478 5 15.269907069243427 36.23259287714882 33.51547804203487 14.982022011572887 6 35.0606539723077 34.259972214534486 16.45596935378241 14.223404459375402 7 30.849827878045826 30.444912979617193 19.8899881444865 18.815270997850476 8 27.364607697081 34.41391229039421 19.16569011836656 19.055789894158227 9 27.102096031205413 15.436317958600196 18.586418170994737 38.875167839199655 10-11 26.414454693603133 24.911758580244882 26.92547390940548 21.748312816746505 12-13 26.82541058171733 21.964998602972248 26.991455351232872 24.218135464077548 14-15 23.85543164698725 23.708669570316996 24.183747992626383 28.25215079006937 16-17 24.539060611518057 26.800143072390565 24.71702230473004 23.943774011361334 18-19 24.435531396805754 25.898456775010075 26.070573028758677 23.595438799425494 20-21 25.105685788153792 25.295573359377315 25.722515191690263 23.876225660778626 22-23 24.826733713037516 25.036185132727525 25.674847017934127 24.462234136300832 24-25 24.6723667921662 25.206405497390804 25.753271082643455 24.367956627799547 26-27 24.46831360447015 25.54416054562138 25.60889373804513 24.37863211186334 28-29 24.518126547304004 25.52253778279908 25.722972767905937 24.236362901990976 30-31 24.62693028803237 25.3253105373064 25.552316345638847 24.49544282902238 32-33 24.61295576526489 25.33332009910158 25.501155257161656 24.552568878471874 34-35 24.801672041803783 25.376921223669584 25.411097604824302 24.41030912970233 36-37 24.918069441338996 25.092094876088872 25.4676498637913 24.522185818780827 38-39 24.64771924780755 25.19169316316251 25.59474793247472 24.565839656555216 40-41 24.734574230462623 25.02542803284905 25.74887781265529 24.49111992403304 42-43 24.747273750336067 24.967328805163334 25.534986894450796 24.750410550049807 44-45 24.454324726171272 25.13936570507895 25.601284657183466 24.805024911566306 46-47 24.55658489162726 25.122689940799642 25.471509864082993 24.849215303490105 48-49 24.566344532979535 25.033856031141276 25.57584908690515 24.82395034897404 50-51 24.42523969686192 25.155446212473613 25.63468024106682 24.784633849597647 52-53 24.59639375435702 25.05804420347248 25.51122013044605 24.83434191172445 54-55 24.294190467597566 24.921651494669906 25.668470302965048 25.115687734767484 56-57 24.219122553992793 25.103263662083318 25.738317362609287 24.939296421314598 58-59 24.282371018166966 24.934501268116584 25.731241403843892 25.051886309872557 60-61 24.32221358020945 25.02788627192315 25.7677023925041 24.882197755363304 62-63 24.12340744225114 25.13116523363369 25.578982811588574 25.1664445125266 64-65 23.959193524398025 24.980564434374855 25.615448172281237 25.444793868945894 66-67 23.976892030073405 25.03594646629293 25.54679589823493 25.440365605398735 68-69 23.911267611100417 24.874103277664116 25.719221484851868 25.4954076263836 70-71 23.8289476836309 24.82108899178539 25.635317456243317 25.71464586834039 72-73 23.962963170038268 24.81567561418356 25.47334086943762 25.74802034634055 74-75 23.847013318734124 24.935687075271005 25.351803341715097 25.865496264279773 76-77 23.89883844424497 24.806675106819615 25.545925945489785 25.748560503445635 78-79 23.844329839718004 24.81566463119115 25.52646784007276 25.81353768901809 80-81 23.699235430156946 24.96446129343781 25.536171912661132 25.80013136374411 82-83 23.734483528752335 24.886910808678113 25.431545707789255 25.947059954780293 84-85 23.64795623891566 24.715976363758312 25.43364363771086 26.20242375961517 86-87 23.680011709621958 24.66399731502028 25.55222474240833 26.10376623294944 88-89 23.655704311242097 24.64837718860819 25.442582055843044 26.253336444306676 90-91 23.444757322677177 24.779452865626116 25.494372766053992 26.281417045642712 92-93 23.519196185760148 24.54591674159752 25.46187774581135 26.473009326830983 94-95 23.291304947340677 24.54563277696313 25.526065746399706 26.636996529296486 96-97 23.41651448932455 24.532207933842862 25.457475828124743 26.593801748707847 98-99 23.335859243107564 24.51792342843665 25.381287296992927 26.764930031462857 100-101 23.36671773688485 24.270344665234205 25.502964471620558 26.859973126260385 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 48.0 2 64.5 3 86.0 4 87.5 5 98.5 6 167.5 7 337.5 8 492.5 9 522.5 10 478.0 11 421.5 12 426.0 13 458.0 14 504.0 15 575.0 16 655.5 17 729.5 18 794.0 19 890.5 20 1001.0 21 1184.0 22 1441.5 23 1792.5 24 2203.0 25 2669.5 26 3404.0 27 4510.0 28 6041.5 29 8301.0 30 11694.0 31 16579.5 32 23032.0 33 30285.5 34 38222.5 35 46478.5 36 56555.5 37 68131.5 38 78810.5 39 88626.0 40 99230.5 41 112450.0 42 126343.0 43 139104.0 44 148623.5 45 157596.5 46 166934.5 47 176091.0 48 186860.5 49 195360.0 50 199306.5 51 201640.0 52 203603.5 53 204551.0 54 202777.0 55 195067.5 56 182176.5 57 167524.5 58 153531.5 59 134824.5 60 113354.5 61 93759.0 62 76310.0 63 61096.5 64 46857.5 65 34896.5 66 26065.5 67 20465.0 68 15482.5 69 11039.5 70 8261.5 71 6592.5 72 5328.5 73 4095.5 74 3047.5 75 2214.0 76 1346.5 77 683.0 78 357.5 79 174.5 80 88.5 81 50.5 82 21.5 83 7.5 84 5.5 85 4.5 86 4.0 87 3.0 88 1.5 89 0.5 90 0.5 91 0.0 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19119377267603307 2 0.0 3 0.013754455371468377 4 0.013526354950714343 5 0.007755414305637229 6 0.10871266053137361 7 0.14425070608485244 8 0.12584300213000174 9 0.14443318642145567 10-11 0.11719799618342376 12-13 0.11620575935314371 14-15 0.11811039786643991 16-17 0.06922847769884996 18-19 0.08130639497777618 20-21 0.03886831169648775 22-23 0.08626757912917646 24-25 0.05953420981680343 26-27 0.06783706513225034 28-29 0.041400226366857557 30-31 0.025239311556434097 32-33 0.033302661430089274 34-35 0.020300937447109212 36-37 0.02404178434747541 38-39 0.03145504802198158 40-41 0.024543605273134286 42-43 0.013355279635148815 44-45 0.028067756773784144 46-47 0.03520729994338548 48-49 0.00908980176704834 50-51 0.015624878821651474 52-53 0.006979872875073505 54-55 0.013104369172319377 56-57 0.005280524740455936 58-59 0.0038891121738563158 60-61 0.024018974305400002 62-63 0.010059228555252993 64-65 0.007253593379978349 66-67 0.04158270670346079 68-69 0.09249472061576164 70-71 0.02255913161257417 72-73 0.04601925988712679 74-75 0.08868544358916924 76-77 0.24841276322218306 78-79 0.08136342008296468 80-81 0.017905883029191837 82-83 0.012477093015245775 84-85 0.013594785076940553 86-87 0.26371830145477887 88-89 0.6252802783920015 90-91 0.26747055337618275 92-93 0.354969874777431 94-95 0.0011975272089586896 96-97 0.003843492089705509 98-99 0.003079355680179488 100-101 0.004573413436118424 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4384034.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.50150507779205 #Duplication Level Percentage of deduplicated Percentage of total 1 71.28766940021116 33.14983920597881 2 12.975909947194667 12.067986845968903 3 5.577542286759568 7.780923329080498 4 3.0019443972641895 5.583797305305203 5 1.7878708328079636 4.156934230512792 6 1.1805988842211206 3.2939775005666436 7 0.8108051263880228 2.6392561091282722 8 0.5858161834372645 2.1793067383008573 9 0.43321582633940703 1.8130669153471637 >10 2.1797295099765943 17.835300391054936 >50 0.1227527286126635 3.8774623191884574 >100 0.053141429873365405 4.3462769233198655 >500 0.0021664209173734954 0.6656287257252141 >1k 8.370259965696873E-4 0.6102434605223959 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 1.1405021037701807E-5 0.0 0.0 2.2810042075403613E-5 0.0 20-21 2.2810042075403613E-5 0.0 0.0 5.702510518850903E-5 0.0 22-23 2.2810042075403613E-5 0.0 0.0 1.3686025245242167E-4 0.0 24-25 2.2810042075403613E-5 0.0 0.0 4.219857783949668E-4 0.0 26-27 2.2810042075403613E-5 0.0 0.0 9.580217671669517E-4 0.0 28-29 2.2810042075403613E-5 0.0 0.0 0.004710273688570846 0.0 30-31 2.2810042075403613E-5 0.0 0.0 0.02077994833069269 0.0 32-33 3.421506311310542E-5 0.0 0.0 0.054550215623327736 1.1405021037701807E-5 34-35 4.5620084150807227E-5 0.0 0.0 0.10183543284563942 2.2810042075403613E-5 36-37 4.5620084150807227E-5 0.0 0.0 0.18024495247983935 2.2810042075403613E-5 38-39 4.5620084150807227E-5 0.0 0.0 0.3144136199673634 2.2810042075403613E-5 40-41 4.5620084150807227E-5 0.0 0.0 0.4699667019005783 2.2810042075403613E-5 42-43 4.5620084150807227E-5 0.0 0.0 0.6329672625714124 2.2810042075403613E-5 44-45 4.5620084150807227E-5 2.2810042075403613E-5 0.0 0.8267271649809285 3.421506311310542E-5 46-47 6.843012622621083E-5 2.2810042075403613E-5 0.0 1.0585798376563686 4.5620084150807227E-5 48-49 6.843012622621083E-5 2.2810042075403613E-5 0.0 1.3079506226457185 4.5620084150807227E-5 50-51 6.843012622621083E-5 2.2810042075403613E-5 0.0 1.583005515011973 4.5620084150807227E-5 52-53 6.843012622621083E-5 2.2810042075403613E-5 0.0 1.8661237572518825 4.5620084150807227E-5 54-55 6.843012622621083E-5 2.2810042075403613E-5 0.0 2.176454379687749 4.5620084150807227E-5 56-57 6.843012622621083E-5 2.2810042075403613E-5 0.0 2.5360204779433735 4.5620084150807227E-5 58-59 6.843012622621083E-5 2.2810042075403613E-5 0.0 2.926323107895605 4.5620084150807227E-5 60-61 6.843012622621083E-5 2.2810042075403613E-5 0.0 3.349791539025473 4.5620084150807227E-5 62-63 6.843012622621083E-5 2.2810042075403613E-5 0.0 3.7761796555409926 4.5620084150807227E-5 64-65 6.843012622621083E-5 2.2810042075403613E-5 0.0 4.229335356431998 4.5620084150807227E-5 66-67 6.843012622621083E-5 2.2810042075403613E-5 0.0 4.7473057918802635 6.843012622621083E-5 68-69 9.124016830161445E-5 2.2810042075403613E-5 0.0 5.312755329908482 6.843012622621083E-5 70-71 9.124016830161445E-5 2.2810042075403613E-5 0.0 5.920825431554591 6.843012622621083E-5 72-73 9.124016830161445E-5 2.2810042075403613E-5 0.0 6.533788287225875 6.843012622621083E-5 74-75 9.124016830161445E-5 2.2810042075403613E-5 0.0 7.175537415996317 6.843012622621083E-5 76-77 9.124016830161445E-5 2.2810042075403613E-5 0.0 7.8709927888332984 6.843012622621083E-5 78-79 9.124016830161445E-5 3.421506311310542E-5 0.0 8.624659389046709 6.843012622621083E-5 80-81 9.124016830161445E-5 4.5620084150807227E-5 0.0 9.41762769175604 6.843012622621083E-5 82-83 9.124016830161445E-5 4.5620084150807227E-5 0.0 10.21388064052423 7.983514726391265E-5 84-85 9.124016830161445E-5 4.5620084150807227E-5 0.0 11.021869355940215 9.124016830161445E-5 86-87 9.124016830161445E-5 4.5620084150807227E-5 0.0 11.863183542828363 9.124016830161445E-5 88-89 9.124016830161445E-5 4.5620084150807227E-5 0.0 12.76436268514341 9.124016830161445E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5740 0.0 45.81636 1 GGTATCA 3020 0.0 45.194157 1 TCAACGC 7430 0.0 33.99111 4 ATCAACG 7520 0.0 33.5843 3 CAACGCA 7670 0.0 32.80034 5 TATCAAC 8050 0.0 31.960323 2 AACGCAG 8045 0.0 31.56752 6 GTACATG 13350 0.0 26.823845 1 TACATGG 13680 0.0 25.122349 2 ACGCAGA 10050 0.0 24.701797 7 CGCAGAG 10340 0.0 23.730577 8 ACATGGG 14345 0.0 23.033037 3 GCAGAGT 12265 0.0 19.154726 9 GTGTACG 435 0.0 18.58519 1 CATGGGG 10230 0.0 18.515684 4 GAGTACA 10280 0.0 18.041756 1 AGAGTAC 10130 0.0 17.919487 10-11 AGTACAT 10100 0.0 17.530539 2 GTATAGA 1095 0.0 16.937832 1 GCACCGT 1045 0.0 16.80731 6 >>END_MODULE