##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920879_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4083011 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.174474425858758 31.0 30.0 34.0 26.0 34.0 2 30.18723878040005 31.0 30.0 34.0 26.0 34.0 3 30.33705591290349 31.0 30.0 34.0 26.0 34.0 4 33.9660057246968 35.0 35.0 37.0 30.0 37.0 5 33.47659533613796 35.0 35.0 37.0 28.0 37.0 6 33.41625261357366 35.0 35.0 37.0 28.0 37.0 7 33.22339347114176 35.0 33.0 37.0 27.0 37.0 8 33.15842377108462 35.0 33.0 37.0 27.0 37.0 9 34.47391030785859 38.0 34.0 39.0 27.0 39.0 10-11 34.29127033946271 37.0 34.0 39.0 27.0 39.0 12-13 34.10452445511413 37.0 34.0 39.0 26.0 39.0 14-15 35.01244914598565 38.0 34.0 40.0 25.0 41.0 16-17 34.894450688474755 38.0 34.0 40.0 25.0 41.0 18-19 34.81203993817308 38.0 33.5 40.0 25.0 41.0 20-21 34.69606008898825 38.0 34.0 40.0 24.5 41.0 22-23 34.555512463718564 38.0 33.5 40.0 24.0 41.0 24-25 34.385504594525955 38.0 33.0 40.0 23.5 41.0 26-27 34.217679795621414 38.0 33.0 40.0 23.0 41.0 28-29 34.163351262095546 38.0 33.0 40.0 22.5 41.0 30-31 34.15009756280353 38.0 33.0 40.0 22.0 41.0 32-33 34.008914254700755 38.0 33.0 40.0 21.5 41.0 34-35 33.85025928169187 38.0 33.0 40.0 20.0 41.0 36-37 33.67019523092149 38.0 33.0 40.0 18.5 41.0 38-39 33.49347258677481 38.0 32.0 40.0 18.0 41.0 40-41 33.279606520775964 38.0 32.0 40.0 16.0 41.0 42-43 33.315631650269864 38.0 32.0 40.0 16.0 41.0 44-45 33.18368086688966 38.0 32.0 40.0 15.0 41.0 46-47 32.952813009810654 38.0 32.0 40.0 14.0 41.0 48-49 32.71234488469416 37.0 31.0 40.0 10.5 41.0 50-51 32.47164323093912 37.0 31.0 40.0 9.0 41.0 52-53 32.22719789390722 37.0 31.0 40.0 8.0 41.0 54-55 31.96605434077939 37.0 30.5 40.0 7.0 41.0 56-57 31.65607623883453 36.0 30.0 39.5 4.0 41.0 58-59 31.34216794909443 36.0 30.0 39.0 2.0 41.0 60-61 31.033936964656718 35.5 29.0 39.0 2.0 40.0 62-63 30.72468957345449 35.0 29.0 39.0 2.0 40.0 64-65 30.33475724165328 35.0 28.5 38.5 2.0 40.0 66-67 29.913061708626305 34.5 28.0 38.0 2.0 40.0 68-69 29.47768044220307 34.0 28.0 37.5 2.0 40.0 70-71 29.05701245967743 34.0 27.5 37.0 2.0 39.0 72-73 28.623404271994367 34.0 26.0 36.0 2.0 39.0 74-75 28.18438561639927 34.0 26.0 36.0 2.0 39.0 76-77 26.694221862248227 31.5 25.0 34.5 2.0 36.5 78-79 27.541442455090127 33.0 26.0 35.0 2.0 37.0 80-81 27.562280018349206 33.0 26.0 35.0 2.0 37.0 82-83 27.233696161974585 33.0 26.0 35.0 2.0 36.0 84-85 26.9223865671682 33.0 25.5 35.0 2.0 36.0 86-87 26.394338148978782 33.0 24.5 35.0 2.0 35.0 88-89 26.03688454427382 32.5 23.5 35.0 2.0 35.0 90-91 25.688441691682925 32.0 22.0 35.0 2.0 35.0 92-93 25.394383213760626 32.0 20.0 35.0 2.0 35.0 94-95 25.038112437120546 32.0 19.0 34.0 2.0 35.0 96-97 24.539724237823506 32.0 12.5 34.0 2.0 35.0 98-99 23.975775353042152 32.0 2.0 34.0 2.0 35.0 100-101 21.81063815404857 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 103045.0 3 45577.0 4 23784.0 5 16516.0 6 14025.0 7 13833.0 8 15494.0 9 17964.0 10 20216.0 11 22875.0 12 25331.0 13 27348.0 14 29558.0 15 31524.0 16 32969.0 17 34602.0 18 33863.0 19 32338.0 20 32659.0 21 34255.0 22 37115.0 23 41919.0 24 49274.0 25 57725.0 26 68587.0 27 81520.0 28 96871.0 29 113619.0 30 134043.0 31 158783.0 32 190805.0 33 232325.0 34 292630.0 35 379781.0 36 509308.0 37 621979.0 38 381576.0 39 27374.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93384654683887 18.847590949925124 12.786569222845198 25.431993280390806 2 16.231942554159172 20.763622728422725 37.58552205712892 25.418912660289184 3 19.776127811629518 23.776609868247654 29.104682709746065 27.34257961037676 4 13.878276376044257 16.106132476983767 35.83159111757783 34.18400002939415 5 14.444837154665041 36.746581155444915 34.37768125760672 14.430900432283329 6 33.806791853306564 35.229692721473214 16.832969247629766 14.130546177590464 7 29.32523240065672 31.437820714377864 20.6530126120063 18.583934272959116 8 26.69836370127985 34.5304934987484 20.000152035907938 18.77099076406381 9 26.47562552777776 15.887450251236315 19.321319805544785 38.31560441544114 10-11 25.593889291216776 25.386734360734497 27.755658938906276 21.26371740914245 12-13 26.350423497487164 22.57934838750728 27.504183973972868 23.566044141032688 14-15 23.155078804329502 24.333928557198192 24.97744463222705 27.53354800624525 16-17 23.477488232238564 27.46369373099644 25.6957938240896 23.3630242126754 18-19 23.44814012121236 26.681241791840836 27.054497029498144 22.816121057448658 20-21 24.11751641213851 26.00705156294618 26.823478046647725 23.051953978267584 22-23 23.714507829109834 25.902913130640158 26.736496793998548 23.646082246251453 24-25 23.53890832847922 25.916912476263455 26.93962089653991 23.60455829871741 26-27 23.43744409202508 26.19693919614074 26.77122591453806 23.594390797296125 28-29 23.4879899563789 26.454009062829353 26.65582723952451 23.402173741267234 30-31 23.712544881101596 26.1094985577661 26.519637078119484 23.658319483012825 32-33 23.47147483518286 26.138952924385684 26.466853867137647 23.92271837329381 34-35 23.69145023621451 26.162115261119585 26.588208981895917 23.558225520769987 36-37 23.79231420114835 25.97864489706327 26.539935355566435 23.689105546221946 38-39 23.648331397263924 25.960393936531958 26.621021732608785 23.77025293359533 40-41 23.789348641892865 25.82241514027545 26.757658311706813 23.630577906124874 42-43 23.64211707750576 25.779603856304217 26.58141247258392 23.996866593606107 44-45 23.512227722475146 25.818757213952654 26.776514120085494 23.89250094348671 46-47 23.53679053698972 25.79844332981108 26.665553557730544 23.999212575468665 48-49 23.296193122239377 25.821435998351067 26.6823256635356 24.200045215873956 50-51 23.20844373194904 25.936788364491125 26.749197248507024 24.105570655052812 52-53 23.405124313817318 25.75655223022231 26.65854628714302 24.179777168817353 54-55 23.139455645674893 25.655335667857443 26.83551060039858 24.369698086069082 56-57 23.00138495351913 25.83356530192391 26.72648006880558 24.438569675751385 58-59 22.932724642664876 25.689773497120406 26.738547616843285 24.63895424337144 60-61 22.897192369594986 25.67249864652666 26.830826855850802 24.599482128027557 62-63 22.78461944313196 25.664291454699146 26.780900718981098 24.7701883831878 64-65 22.645558954713906 25.54477295717795 26.644348974088288 25.16531911401985 66-67 22.669851364436447 25.654813357795575 26.505086989928927 25.170248287839055 68-69 22.813859435724932 25.487098705237443 26.45738618674801 25.24165567228961 70-71 22.58568164881903 25.319721538622087 26.45445557312257 25.640141239436314 72-73 22.584864713612145 25.269961440555562 26.4615627000775 25.6836111457548 74-75 22.458223108163494 25.26405015482183 26.366837045854325 25.91088969116035 76-77 22.326768037805415 25.06992943894032 26.623286782455207 25.980015740799058 78-79 22.318647507707315 25.134546363697087 26.518964808311342 26.02784132028426 80-81 22.232284494541876 25.030362369180935 26.444227304037177 26.293125832240012 82-83 22.06169155642473 25.00268215638515 26.484249006009993 26.45137728118013 84-85 21.988458267926962 24.819475959460522 26.426032449073045 26.766033323539475 86-87 21.879885456926697 24.821967242783014 26.481768716353155 26.81637858393713 88-89 21.86791146946343 24.60771227193638 26.46760960872821 27.05676664987198 90-91 21.74332376275845 24.566119477314988 26.40000353616862 27.290553223757946 92-93 21.70797596735973 24.379481834136147 26.491007667897236 27.421534530606888 94-95 21.443166055610874 24.185930772536253 26.647637174055443 27.72326599779743 96-97 21.468060660582843 24.02947059761456 26.640649703185204 27.861819038617398 98-99 21.371548500734104 23.977575641125025 26.55516698194645 28.095708876194426 100-101 21.443862860913363 23.81023060417699 26.60292148671316 28.142985048196483 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 122.0 1 91.5 2 122.0 3 188.5 4 172.5 5 178.0 6 315.0 7 561.0 8 785.5 9 874.0 10 780.0 11 658.5 12 665.5 13 702.5 14 752.0 15 824.0 16 913.0 17 1018.0 18 1134.5 19 1277.0 20 1474.0 21 1682.5 22 1947.5 23 2385.5 24 2976.5 25 3647.0 26 4617.5 27 5986.0 28 7686.5 29 10150.0 30 14090.5 31 19717.0 32 27633.5 33 36338.0 34 45411.5 35 55532.0 36 66791.5 37 78929.5 38 90174.0 39 100456.0 40 112546.5 41 124162.0 42 134585.0 43 145846.5 44 155861.0 45 165030.0 46 172797.0 47 179435.0 48 185478.5 49 188792.5 50 190052.0 51 189803.5 52 186283.5 53 181809.0 54 174763.5 55 162264.0 56 147109.5 57 130458.5 58 114935.5 59 99473.5 60 82133.5 61 66302.0 62 52621.0 63 39720.5 64 29031.0 65 21593.0 66 16198.0 67 12329.5 68 9233.5 69 6559.0 70 4642.0 71 3435.5 72 2478.0 73 1816.0 74 1297.5 75 915.5 76 632.5 77 380.0 78 222.5 79 127.0 80 69.5 81 39.0 82 18.5 83 10.0 84 7.0 85 4.5 86 4.0 87 2.0 88 0.5 89 0.5 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19039870330988576 2 0.0 3 0.012319339820539304 4 0.013862318764264902 5 0.006661750360212108 6 0.10533892757085396 7 0.14168465380083473 8 0.12311992301759656 9 0.14141524477891437 10-11 0.11419268770032703 12-13 0.1139232786784067 14-15 0.11544176589286681 16-17 0.06587050585952377 18-19 0.0790837937982533 20-21 0.03684780667992322 22-23 0.08318615845022215 24-25 0.055792159266776414 26-27 0.06478062390720965 28-29 0.03954189689912665 30-31 0.02389168189848129 32-33 0.031606576617109285 34-35 0.019850546569676154 36-37 0.024222320243565347 38-39 0.03153310142931283 40-41 0.02509177663249009 42-43 0.013543926283813588 44-45 0.02638983828356083 46-47 0.033063834508405686 48-49 0.009159906745291648 50-51 0.015809411240871013 52-53 0.006833192465070507 54-55 0.012809174405849015 56-57 0.004959575176260852 58-59 0.0036492676605573682 60-61 0.02255688265351232 62-63 0.010482460125627875 64-65 0.007372010508911194 66-67 0.039652109680821335 68-69 0.08946828700681923 70-71 0.021185345814645123 72-73 0.043595278092564534 74-75 0.08530469303168667 76-77 0.24872575655563994 78-79 0.08041859304322227 80-81 0.016042082668893128 82-83 0.011633571401105705 84-85 0.012772436811950788 86-87 0.2609961129176483 88-89 0.616689497040297 90-91 0.26468211817210385 92-93 0.3500970239854852 94-95 0.0012368323279070275 96-97 0.003967660141008683 98-99 0.0031716789398803973 100-101 0.004714657883605995 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4083011.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.96468673722451 #Duplication Level Percentage of deduplicated Percentage of total 1 71.58374667464727 37.198269714248816 2 13.357176080498293 13.882029414340838 3 5.774374393081215 9.001906693197483 4 3.0096513510853455 6.255823585896578 5 1.760930143796255 4.575309164425404 6 1.0965393429367132 3.4188794070448973 7 0.7759488534389732 2.8225357365145345 8 0.5223026393506245 2.17130344287046 9 0.3866092595391473 1.8081026155495905 >10 1.6503293688289493 14.211798191079106 >50 0.05980866858255836 2.0987396929783846 >100 0.021257663977759238 1.8605995537604532 >500 8.048044856221601E-4 0.2776941729279496 >1k 5.207557513421727E-4 0.417008615165439 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4491729265485693E-5 2 0.0 0.0 0.0 0.0 2.4491729265485693E-5 3 0.0 0.0 0.0 0.0 2.4491729265485693E-5 4 0.0 0.0 0.0 0.0 2.4491729265485693E-5 5 0.0 0.0 0.0 0.0 2.4491729265485693E-5 6 0.0 0.0 0.0 0.0 2.4491729265485693E-5 7 0.0 0.0 0.0 0.0 2.4491729265485693E-5 8 0.0 0.0 0.0 0.0 2.4491729265485693E-5 9 0.0 0.0 0.0 0.0 2.4491729265485693E-5 10-11 0.0 0.0 0.0 0.0 3.673759389822854E-5 12-13 0.0 0.0 0.0 0.0 1.836879694911427E-4 14-15 0.0 0.0 0.0 1.2245864632742847E-5 2.4491729265485693E-4 16-17 0.0 0.0 0.0 2.4491729265485693E-5 2.694090219203426E-4 18-19 0.0 0.0 0.0 3.673759389822854E-5 2.694090219203426E-4 20-21 0.0 0.0 0.0 1.347045109601713E-4 3.428842097167997E-4 22-23 1.2245864632742847E-5 0.0 0.0 4.408511267787425E-4 3.428842097167997E-4 24-25 2.4491729265485693E-5 0.0 0.0 0.0012368323279070275 3.428842097167997E-4 26-27 2.4491729265485693E-5 0.0 0.0 0.002559385708243255 4.2860526214599966E-4 28-29 2.4491729265485693E-5 0.0 0.0 0.011106999221897762 4.408511267787425E-4 30-31 2.4491729265485693E-5 0.0 0.0 0.05074686303808636 4.6534285604422817E-4 32-33 2.4491729265485693E-5 0.0 0.0 0.1323288132214192 4.898345853097139E-4 34-35 2.4491729265485693E-5 0.0 0.0 0.2445989001744056 5.143263145751995E-4 36-37 2.4491729265485693E-5 0.0 0.0 0.42163736516996897 5.143263145751995E-4 38-39 2.4491729265485693E-5 0.0 0.0 0.7011614712769572 5.265721792079424E-4 40-41 2.4491729265485693E-5 0.0 0.0 1.0173007126358464 5.388180438406852E-4 42-43 2.4491729265485693E-5 1.2245864632742847E-5 0.0 1.3475594359162884 5.755556377389137E-4 44-45 2.4491729265485693E-5 3.673759389822854E-5 0.0 1.7486237485032492 6.000473670043995E-4 46-47 2.4491729265485693E-5 4.8983458530971386E-5 0.0 2.2160361556704107 6.122932316371423E-4 48-49 2.4491729265485693E-5 4.8983458530971386E-5 0.0 2.7004090853539213 6.857684194335994E-4 50-51 2.4491729265485693E-5 4.8983458530971386E-5 0.0 3.225217860054749 7.10260148699085E-4 52-53 2.4491729265485693E-5 4.8983458530971386E-5 0.0 3.7482509843838283 7.347518779645708E-4 54-55 2.4491729265485693E-5 4.8983458530971386E-5 0.0 4.341844780726772 7.592436072300564E-4 56-57 2.4491729265485693E-5 4.8983458530971386E-5 0.0 5.027711167077434 7.592436072300564E-4 58-59 2.4491729265485693E-5 4.8983458530971386E-5 0.0 5.748833397705761 7.592436072300564E-4 60-61 2.4491729265485693E-5 4.8983458530971386E-5 0.0 6.494998421508049 7.95981201128285E-4 62-63 2.4491729265485693E-5 4.8983458530971386E-5 0.0 7.248351767849757 8.327187950265136E-4 64-65 2.4491729265485693E-5 4.8983458530971386E-5 0.0 8.055917556920615 8.327187950265136E-4 66-67 2.4491729265485693E-5 4.8983458530971386E-5 0.0 8.982905017889983 8.449646596592564E-4 68-69 2.4491729265485693E-5 4.8983458530971386E-5 0.0 9.95908411708908 8.572105242919992E-4 70-71 2.4491729265485693E-5 4.8983458530971386E-5 0.0 10.974829604916568 8.69456388924742E-4 72-73 2.4491729265485693E-5 4.8983458530971386E-5 0.0 12.003298546097476 9.184398474557135E-4 74-75 2.4491729265485693E-5 4.8983458530971386E-5 0.0 13.064770092463625 0.0010041608998849134 76-77 2.4491729265485693E-5 4.8983458530971386E-5 0.0 14.22229820100901 0.0010776360876813705 78-79 2.4491729265485693E-5 4.8983458530971386E-5 0.0 15.447643907890525 0.0010776360876813705 80-81 2.4491729265485693E-5 7.347518779645708E-5 0.0 16.687684652331328 0.0010776360876813705 82-83 2.4491729265485693E-5 7.347518779645708E-5 0.0 17.94466142755922 0.0011021278169468561 84-85 2.4491729265485693E-5 7.347518779645708E-5 0.0 19.22132955311656 0.0011021278169468561 86-87 2.4491729265485693E-5 7.347518779645708E-5 0.0 20.544225817662507 0.0011266195462123418 88-89 2.4491729265485693E-5 7.347518779645708E-5 0.0 21.922461144483812 0.0011511112754778274 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3250 0.0 41.836445 1 GTATCAA 5715 0.0 41.260788 1 TCAACGC 7030 0.0 32.74534 4 ATCAACG 7105 0.0 32.533287 3 CAACGCA 7165 0.0 32.058186 5 TATCAAC 7330 0.0 31.532719 2 AACGCAG 7650 0.0 30.15055 6 GTACATG 10400 0.0 24.63925 1 ACGCAGA 9370 0.0 24.31178 7 CGCAGAG 9680 0.0 23.287205 8 TACATGG 10640 0.0 23.239807 2 ACATGGG 10970 0.0 21.590216 3 GTGTAAG 1330 0.0 19.659985 1 GAGTACA 7615 0.0 19.478556 1 GCAGAGT 11035 0.0 19.223583 9 GTATAGG 780 0.0 18.285158 1 CATGGGG 7620 0.0 17.939098 4 AGAGTAC 9000 0.0 17.90058 10-11 AGTACAT 7780 0.0 17.630096 2 CAGAGTA 9865 0.0 16.13858 10-11 >>END_MODULE