##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920878_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4164337 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.469988139768706 31.0 28.0 33.0 20.0 34.0 2 28.495013491943617 31.0 28.0 34.0 16.0 34.0 3 28.570304468634504 31.0 28.0 34.0 18.0 34.0 4 32.031491207363864 35.0 32.0 37.0 22.0 37.0 5 31.98823101972775 35.0 32.0 37.0 22.0 37.0 6 32.114965239364636 35.0 32.0 37.0 22.0 37.0 7 31.94640083163298 35.0 32.0 37.0 20.0 37.0 8 31.888377669722697 35.0 32.0 37.0 19.0 37.0 9 33.144102890808306 37.0 33.0 39.0 19.0 39.0 10-11 32.94236273385175 37.0 32.0 39.0 18.0 39.0 12-13 32.76453406628714 37.0 32.0 39.0 17.0 39.0 14-15 33.51017100681333 38.0 32.0 40.0 17.0 41.0 16-17 33.4026628968789 38.0 32.0 40.0 17.0 41.0 18-19 33.28810300415168 38.0 32.0 40.0 16.0 41.0 20-21 33.190761098345305 38.0 32.0 40.0 15.5 41.0 22-23 32.96891870182456 38.0 32.0 40.0 11.0 41.0 24-25 32.7740156476289 38.0 31.5 40.0 10.0 41.0 26-27 32.80309170463389 38.0 32.0 40.0 10.0 41.0 28-29 32.6392275649161 38.0 31.0 40.0 9.5 41.0 30-31 32.39068007704468 37.5 31.0 40.0 8.5 41.0 32-33 32.1389756640733 37.0 30.0 40.0 8.0 41.0 34-35 31.812845838365146 37.0 30.0 40.0 4.5 41.0 36-37 31.5056892609796 37.0 30.0 40.0 2.0 41.0 38-39 31.300211054004514 37.0 30.0 40.0 2.0 41.0 40-41 31.098362716562086 36.5 30.0 40.0 2.0 41.0 42-43 30.856845759601107 36.0 29.0 39.5 2.0 41.0 44-45 30.571415329739164 36.0 28.5 39.0 2.0 40.5 46-47 30.315452856000846 36.0 28.0 39.0 2.0 40.0 48-49 30.002098173130562 35.0 27.5 39.0 2.0 40.0 50-51 28.865990792772052 34.0 25.5 38.0 2.0 39.5 52-53 29.3158546006243 34.5 27.0 38.5 2.0 39.5 54-55 29.960383609683845 35.0 28.0 39.0 2.0 40.0 56-57 29.90906691749491 35.0 28.0 39.0 2.0 40.0 58-59 29.657560255089827 35.0 27.5 39.0 2.0 40.0 60-61 29.325218996445294 35.0 27.0 39.0 2.0 40.0 62-63 28.928979330923504 34.5 26.0 38.5 2.0 40.0 64-65 28.502819416392093 34.0 26.0 38.0 2.0 40.0 66-67 28.115631611946874 34.0 25.5 37.5 2.0 40.0 68-69 27.66345098871681 34.0 24.5 37.0 2.0 39.5 70-71 27.340294625531026 33.5 24.0 36.0 2.0 39.0 72-73 26.880774298525793 33.0 22.5 36.0 2.0 39.0 74-75 26.444420564425982 33.0 22.0 35.0 2.0 38.5 76-77 26.035158297707415 32.5 20.5 35.0 2.0 37.0 78-79 25.586554474337692 32.0 19.5 35.0 2.0 37.0 80-81 25.14825265102224 32.0 17.5 35.0 2.0 36.0 82-83 24.68554910421515 31.5 13.0 35.0 2.0 36.0 84-85 24.29482112038483 31.0 7.0 34.0 2.0 35.0 86-87 23.84644506436439 31.0 2.0 34.0 2.0 35.0 88-89 23.323812530061808 31.0 2.0 34.0 2.0 35.0 90-91 22.831616653503307 30.5 2.0 34.0 2.0 35.0 92-93 22.301732544700393 30.0 2.0 34.0 2.0 35.0 94-95 21.669677069843292 30.0 2.0 34.0 2.0 35.0 96-97 21.030507977620445 29.0 2.0 34.0 2.0 35.0 98 20.63531505735487 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 225936.0 3 38173.0 4 27978.0 5 22539.0 6 21131.0 7 21375.0 8 24648.0 9 27822.0 10 30385.0 11 32633.0 12 34145.0 13 33685.0 14 32036.0 15 33724.0 16 36151.0 17 38440.0 18 39458.0 19 38828.0 20 39942.0 21 42353.0 22 46217.0 23 51442.0 24 58793.0 25 67452.0 26 77846.0 27 90077.0 28 104418.0 29 120211.0 30 139874.0 31 164030.0 32 194901.0 33 236766.0 34 292422.0 35 372076.0 36 469674.0 37 511449.0 38 295645.0 39 29661.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.674407668272536 17.687456718693017 12.891508270842337 24.746627342192106 2 16.052002591194405 19.291956368590437 39.341503233828874 25.314537806386276 3 19.736048567947353 23.432132384499933 28.39681532838774 28.435003719164975 4 13.511137754234479 15.176276924525348 35.81176825478255 35.50081706645762 5 14.732320530831423 36.61182327748436 33.76047303293846 14.895383158745757 6 34.26295949890882 34.2916380241697 16.89796834025317 14.547434136668306 7 29.8819087693006 31.003547300137136 20.465015743095734 18.649528187466526 8 27.024108804223673 34.22704274492814 19.59667681406816 19.152171636780025 9 27.101168805502535 15.673275241653112 19.12328421066787 38.102271742176484 10-11 26.055954658797948 25.114039789296537 27.078962888681414 21.7510426632241 12-13 26.64367340214662 22.3314036729987 27.21204106127636 23.812881863578315 14-15 23.728321471513983 23.936224500210244 24.686848689580547 27.648605338695226 16-17 23.956649419628004 26.996468501630545 25.21199976993809 23.834882308803362 18-19 23.838434576268092 26.289640000297876 26.75766531685696 23.114260106577074 20-21 24.76146897907137 25.48358676828738 26.41211662125393 23.342827631387323 22-23 24.355798433047575 25.248653644384245 26.317493549150843 24.078054373417334 24-25 23.969798918166614 25.455799986495702 26.428457634119635 24.145943461218046 26-27 23.960097124568698 25.658359234980608 26.38002871249868 24.001514927952005 28-29 23.954304150683086 25.80917831013729 26.309592358492235 23.926925180687387 30-31 24.160861380703025 25.649789592170404 26.164150542207103 24.02519848491947 32-33 23.990583474629652 25.701438790603603 26.098913866749896 24.20906386801685 34-35 24.26460879688973 25.602174357214864 26.18438666761758 23.948830178277824 36-37 24.276587032397224 25.50219504227102 26.15932590352627 24.061892021805484 38-39 24.24776284498206 25.57731174695616 26.123854884829566 24.051070523232216 40-41 24.269261267243127 25.48463281112304 26.17409854153243 24.0720073801014 42-43 24.26049101727671 25.27897831982633 26.179758644023327 24.28077201887363 44-45 24.0774493622393 25.46439143313289 26.151925577789058 24.30623362683875 46-47 24.087060409315267 25.37471866642188 26.104718351803218 24.43350257245963 48-49 24.13460141903298 25.485677988114258 25.977789415891895 24.401931176960872 50-51 24.0157453741726 25.6807153999151 26.002635237307555 24.300903988604745 52-53 24.01506259922458 25.506392101301095 26.123110119930594 24.355435179543733 54-55 23.818891204061323 25.417288826545263 26.35114070383091 24.412679265562502 56-57 23.876577995682496 25.418521137501216 26.209729875713528 24.49517099110276 58-59 23.763917351785327 25.299455119704895 26.281999662463534 24.65462786604624 60-61 23.7821871445897 25.177707411921542 26.483887182122352 24.556218261366407 62-63 23.637847847454484 25.26726155360914 26.484165613323167 24.61072498561321 64-65 23.699517471022332 25.16087716314931 26.419167049578313 24.720438316250046 66-67 23.673401738327378 25.181862857564706 26.305971094463015 24.8387643096449 68-69 23.69483765211769 25.007887461209183 26.408654760186824 24.888620126486305 70-71 23.568122890222394 24.920863004183524 26.45832841262779 25.052685692966293 72-73 23.44762653873385 24.961382545826446 26.53117904569945 25.059811869740255 74-75 23.42423425788312 25.07000170705019 26.52256046927135 24.98320356579534 76-77 23.52404603993107 24.897389548677847 26.53256724597054 25.04599716542054 78-79 23.54610277662431 24.87091092441186 26.524316017333227 25.0586702816306 80-81 23.478329284605298 24.846808195836825 26.607010882045984 25.06785163751189 82-83 23.421623045902916 24.815576656605295 26.624370591975165 25.138429705516625 84-85 23.45257019237558 24.750033674220052 26.662849853459914 25.134546279944452 86-87 23.408120658120747 24.673516941317313 26.74070591341834 25.177656487143597 88-89 23.380992724551295 24.563900903495757 26.71340613200896 25.341700239943986 90-91 23.400029688878867 24.449611080506504 26.865109831983112 25.285249398631514 92-93 23.48836214660099 24.415354412529208 26.827994460431174 25.268288980438626 94-95 23.44095476463608 24.27038443294012 26.93001741392649 25.358643388497313 96-97 23.568698703088778 24.044425595080316 26.93939072643414 25.447484975396762 98 23.627523079028688 23.987539541330207 26.830033483627336 25.55490389601377 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 160.0 1 117.0 2 137.0 3 214.5 4 220.0 5 248.5 6 379.0 7 702.5 8 1078.0 9 1247.0 10 1278.5 11 1368.0 12 1550.0 13 1739.5 14 1878.5 15 2083.5 16 2273.5 17 2430.5 18 2537.5 19 2570.5 20 2636.5 21 2677.0 22 2919.0 23 3378.0 24 3990.0 25 4861.5 26 6195.5 27 8181.0 28 11080.0 29 15196.5 30 20835.5 31 28289.0 32 36442.0 33 44183.0 34 52753.5 35 62514.5 36 73049.0 37 83982.5 38 94236.0 39 103754.0 40 113524.5 41 123663.5 42 135273.0 43 146212.5 44 154828.0 45 165325.5 46 175933.5 47 183340.5 48 189637.0 49 193978.0 50 195027.0 51 194526.5 52 192219.5 53 187332.0 54 180911.0 55 171370.0 56 157593.5 57 143000.0 58 128905.5 59 112924.0 60 95291.0 61 79032.0 62 63829.5 63 48768.0 64 36059.0 65 26829.5 66 20008.0 67 15113.5 68 11228.0 69 8201.0 70 6088.0 71 4609.0 72 3813.5 73 3091.0 74 2313.0 75 1731.5 76 1119.5 77 567.0 78 318.0 79 186.0 80 107.5 81 61.0 82 41.5 83 31.0 84 20.0 85 14.0 86 12.5 87 13.5 88 14.0 89 7.5 90 4.0 91 3.0 92 2.0 93 4.0 94 5.5 95 6.0 96 4.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.37475353219492086 2 0.024157506945283246 3 0.018442311465186413 4 0.015872874841781535 5 0.0217561643065871 6 0.022644661082904673 7 0.014576149816885616 8 0.009149115453432322 9 0.0 10-11 2.4013426386961477E-5 12-13 0.005258940378744564 14-15 0.0032658259886267607 16-17 0.0057752290460642355 18-19 0.03669251551927714 20-21 0.07787554177291607 22-23 0.09682213519222868 24-25 0.06478822439202206 26-27 0.07403339355100223 28-29 0.05723600179332268 30-31 0.05239729637634995 32-33 0.01934281495469747 34-35 0.3352514457883692 36-37 0.5102973174361248 38-39 0.4630869211593587 40-41 0.47254821115582146 42-43 0.42261229098413505 44-45 0.3972541127195037 46-47 0.39522497818980545 48-49 0.3863640238530167 50-51 0.3828700703137138 52-53 0.4427835691491827 54-55 0.4441883545928199 56-57 0.4145797998576965 58-59 0.3995113747998781 60-61 0.4149880281062748 62-63 0.3946366492433249 64-65 0.4435760122199524 66-67 0.46389137094332183 68-69 0.40658332887083826 70-71 0.36507612136097534 72-73 0.35201281740646834 74-75 0.3338466603447319 76-77 0.33161341169074454 78-79 0.3316614385435184 80-81 0.3475703335248804 82-83 0.34354808460506436 84-85 0.342863701953036 86-87 0.32899594821456574 88-89 0.37105546453132876 90-91 0.3514364951731812 92-93 0.3408585808497247 94-95 0.34813464904497404 96-97 0.34764237380404134 98 0.3421673125878141 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4164337.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.79702301618451 #Duplication Level Percentage of deduplicated Percentage of total 1 71.21861693522649 31.90382022028169 2 11.198126331460182 10.032854460171272 3 5.430382291683709 7.297948815217077 4 3.1514615827820656 5.647043882340379 5 2.0468830950659633 4.5847134560554474 6 1.4404407938805648 3.8716475638151246 7 0.9980404307368381 3.1296468102760584 8 0.763086675928881 2.734720910794385 9 0.6084539482769398 2.453123297272537 >10 3.0163614362686375 22.74304839935237 >50 0.09655572338204631 2.921418852774221 >100 0.03094259316643516 2.3829535822609005 >500 4.861216172243748E-4 0.14510608349661167 >1k 1.620405240183726E-4 0.15195366589185133 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 2.4013426386961477E-5 8 0.0 0.0 0.0 0.0 2.4013426386961477E-5 9 0.0 0.0 0.0 2.4013426386961477E-5 4.802685277392295E-5 10-11 0.0 0.0 0.0 2.4013426386961477E-5 4.802685277392295E-5 12-13 0.0 0.0 0.0 3.602013958044221E-5 4.802685277392295E-5 14-15 0.0 0.0 0.0 4.802685277392295E-5 4.802685277392295E-5 16-17 0.0 0.0 0.0 4.802685277392295E-5 9.60537055478459E-5 18-19 0.0 0.0 0.0 9.60537055478459E-5 9.60537055478459E-5 20-21 0.0 0.0 0.0 1.3207384512828812E-4 9.60537055478459E-5 22-23 0.0 0.0 0.0 3.361879694174607E-4 9.60537055478459E-5 24-25 0.0 0.0 0.0 0.0011286310401871895 9.60537055478459E-5 26-27 0.0 0.0 0.0 0.0020771613824721678 9.60537055478459E-5 28-29 0.0 0.0 0.0 0.00732409504802325 9.60537055478459E-5 30-31 0.0 0.0 0.0 0.02762744705819918 1.0806041874132665E-4 32-33 0.0 0.0 0.0 0.07139191664843647 1.2006713193480739E-4 34-35 0.0 0.0 0.0 0.129672502489592 1.2006713193480739E-4 36-37 0.0 0.0 0.0 0.22776734928032963 1.2006713193480739E-4 38-39 0.0 0.0 0.0 0.3854395069371187 1.2006713193480739E-4 40-41 0.0 0.0 0.0 0.5695624537591458 1.2006713193480739E-4 42-43 0.0 1.2006713193480738E-5 0.0 0.7587642402620153 1.2006713193480739E-4 44-45 0.0 2.4013426386961477E-5 0.0 0.9813326827295678 1.2006713193480739E-4 46-47 0.0 2.4013426386961477E-5 0.0 1.2505472059537928 1.2006713193480739E-4 48-49 0.0 2.4013426386961477E-5 0.0 1.5471730553987346 1.2006713193480739E-4 50-51 0.0 2.4013426386961477E-5 0.0 1.8623612834407974 1.2006713193480739E-4 52-53 0.0 2.4013426386961477E-5 0.0 2.187467056580675 1.2006713193480739E-4 54-55 0.0 2.4013426386961477E-5 0.0 2.552891372624262 1.2006713193480739E-4 56-57 0.0 2.4013426386961477E-5 0.0 2.9710011461608414 1.2006713193480739E-4 58-59 0.0 2.4013426386961477E-5 0.0 3.4277004959012682 1.2006713193480739E-4 60-61 0.0 2.4013426386961477E-5 0.0 3.9148968971531364 1.2006713193480739E-4 62-63 0.0 2.4013426386961477E-5 0.0 4.407616386474006 1.2006713193480739E-4 64-65 0.0 3.602013958044221E-5 0.0 4.932177679183986 1.2006713193480739E-4 66-67 0.0 4.802685277392295E-5 0.0 5.526113760725897 1.2006713193480739E-4 68-69 0.0 4.802685277392295E-5 0.0 6.184778033093863 1.2006713193480739E-4 70-71 2.4013426386961477E-5 4.802685277392295E-5 0.0 6.8850815868168205 1.2006713193480739E-4 72-73 2.4013426386961477E-5 4.802685277392295E-5 0.0 7.59608312199517 1.2006713193480739E-4 74-75 2.4013426386961477E-5 4.802685277392295E-5 0.0 8.323533854248588 1.2006713193480739E-4 76-77 2.4013426386961477E-5 4.802685277392295E-5 0.0 9.108568782977938 1.2006713193480739E-4 78-79 2.4013426386961477E-5 4.802685277392295E-5 0.0 9.971407213201045 1.2006713193480739E-4 80-81 2.4013426386961477E-5 4.802685277392295E-5 0.0 10.877109609524878 1.2006713193480739E-4 82-83 2.4013426386961477E-5 4.802685277392295E-5 0.0 11.791769013891047 1.2006713193480739E-4 84-85 2.4013426386961477E-5 4.802685277392295E-5 0.0 12.706764606226633 1.2006713193480739E-4 86 2.4013426386961477E-5 4.802685277392295E-5 0.0 13.409001240773742 1.2006713193480739E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8215 0.0 40.560467 1 GGTATCA 4590 0.0 38.70317 1 ATCAACG 10170 0.0 32.150543 3 TCAACGC 10170 0.0 31.925083 4 CAACGCA 10350 0.0 31.281248 5 TATCAAC 10620 0.0 31.135553 2 AACGCAG 10725 0.0 30.439665 6 GTACATG 14240 0.0 26.21095 1 ACGCAGA 12620 0.0 25.430758 7 TACATGG 14820 0.0 24.416008 2 CGCAGAG 13265 0.0 23.81287 8 ACATGGG 15700 0.0 22.870825 3 GTATAGG 910 0.0 21.746983 1 GCAGAGT 14575 0.0 20.94986 9 CATGGGG 10610 0.0 18.758326 4 GAGTACA 11120 0.0 18.5829 1 AGAGTAC 12250 0.0 18.33921 10-11 AGTACAT 10955 0.0 17.540722 2 CAGAGTA 13555 0.0 16.708908 10-11 GAGTACT 5475 0.0 15.913979 12-13 >>END_MODULE