##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920878_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4164337 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.240925506269065 31.0 30.0 34.0 27.0 34.0 2 30.246990337237357 31.0 30.0 34.0 26.0 34.0 3 30.390431658148703 31.0 30.0 34.0 27.0 34.0 4 34.03250241274902 35.0 35.0 37.0 30.0 37.0 5 33.55108772416834 35.0 35.0 37.0 28.0 37.0 6 33.495439730261985 35.0 35.0 37.0 28.0 37.0 7 33.30565994058598 35.0 33.0 37.0 27.0 37.0 8 33.23780424110729 35.0 33.0 37.0 27.0 37.0 9 34.56847800742351 38.0 34.0 39.0 27.0 39.0 10-11 34.373612534240145 37.5 34.0 39.0 27.0 39.0 12-13 34.1934462796839 37.0 34.0 39.0 26.0 39.0 14-15 35.08682702672718 38.0 34.0 40.0 26.0 41.0 16-17 34.965334097600646 38.0 34.0 40.0 25.0 41.0 18-19 34.87359404390183 38.0 34.0 40.0 25.0 41.0 20-21 34.75815561997024 38.0 34.0 40.0 25.0 41.0 22-23 34.6032779047421 38.0 33.5 40.0 24.0 41.0 24-25 34.42304465272623 38.0 33.0 40.0 24.0 41.0 26-27 34.24104689413945 38.0 33.0 40.0 23.0 41.0 28-29 34.183230848031755 38.0 33.0 40.0 22.5 41.0 30-31 34.17019852139728 38.0 33.0 40.0 23.0 41.0 32-33 34.01795279776829 38.0 33.0 40.0 22.0 41.0 34-35 33.84922942115396 38.0 33.0 40.0 20.5 41.0 36-37 33.65404000684863 38.0 33.0 40.0 18.5 41.0 38-39 33.46703845053847 38.0 32.0 40.0 18.0 41.0 40-41 33.23419022043605 38.0 32.0 40.0 16.0 41.0 42-43 33.2568023433262 38.0 32.0 40.0 15.5 41.0 44-45 33.10764702760608 38.0 32.0 40.0 15.0 41.0 46-47 32.85978212137971 37.5 31.5 40.0 13.5 41.0 48-49 32.59343960395137 37.0 31.0 40.0 9.0 41.0 50-51 32.33388123967873 37.0 31.0 40.0 8.5 41.0 52-53 32.06147521202055 37.0 31.0 40.0 7.5 41.0 54-55 31.77184147200383 36.0 30.0 40.0 6.5 41.0 56-57 31.44149032607111 36.0 30.0 39.0 2.0 41.0 58-59 31.102008555023282 35.5 29.0 39.0 2.0 40.0 60-61 30.757439419528247 35.0 29.0 39.0 2.0 40.0 62-63 30.42785094001758 35.0 28.5 38.5 2.0 40.0 64-65 30.01665727341471 35.0 28.0 38.0 2.0 40.0 66-67 29.57681642960212 34.0 28.0 37.5 2.0 40.0 68-69 29.126833154953594 34.0 27.5 37.0 2.0 39.5 70-71 28.699850060165637 34.0 26.0 36.5 2.0 39.0 72-73 28.26152782543776 34.0 26.0 36.0 2.0 39.0 74-75 27.82267825586642 33.0 26.0 35.5 2.0 38.0 76-77 26.39460291037925 31.5 24.0 34.0 2.0 36.0 78-79 27.239675967627022 33.0 26.0 35.0 2.0 37.0 80-81 27.269880295470806 33.0 26.0 35.0 2.0 36.5 82-83 26.94512848023587 33.0 25.0 35.0 2.0 36.0 84-85 26.636263227495757 33.0 25.0 35.0 2.0 36.0 86-87 26.10693178770114 32.0 24.0 35.0 2.0 35.0 88-89 25.75125956424756 32.0 22.0 35.0 2.0 35.0 90-91 25.391256039076566 32.0 20.0 34.5 2.0 35.0 92-93 25.085710642534455 32.0 19.5 34.0 2.0 35.0 94-95 24.709807347484123 32.0 17.5 34.0 2.0 35.0 96-97 24.17888886033959 31.5 4.5 34.0 2.0 35.0 98-99 23.573925693333656 31.0 2.0 34.0 2.0 35.0 100-101 21.383198694053817 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 99968.0 3 45079.0 4 24243.0 5 17178.0 6 15004.0 7 14862.0 8 16647.0 9 19274.0 10 22033.0 11 24502.0 12 27074.0 13 29702.0 14 31795.0 15 33714.0 16 35890.0 17 37050.0 18 35718.0 19 34092.0 20 34556.0 21 35698.0 22 38968.0 23 43963.0 24 51107.0 25 60944.0 26 72257.0 27 85120.0 28 100794.0 29 118477.0 30 140006.0 31 165749.0 32 199097.0 33 242580.0 34 305641.0 35 396860.0 36 528247.0 37 615291.0 38 341722.0 39 23435.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.787136124549775 18.932578282075543 13.554401871364613 24.725883722010067 2 16.118844368263183 20.321698267935567 38.18391739189215 25.375539971909095 3 19.54049820669223 24.201225126770794 28.703683690001526 27.554592976535453 4 13.916613389833197 16.138581569754066 35.38397506500094 34.5608299754118 5 14.706887454974712 36.87281297602406 33.80493361149208 14.615365957509146 6 34.24259076828696 34.84116601496486 16.599044491208637 14.317198725539548 7 29.812826797994678 31.136407524058274 20.477974269065477 18.57279140888157 8 27.05081332382488 34.56168224613655 19.495054946904457 18.892449483134115 9 26.981120595929966 15.640275773439456 19.02898295257652 38.34962067805406 10-11 26.052503589985974 25.30093254288329 27.101094437847745 21.54546942928299 12-13 26.628995843531772 22.35553153581128 27.291701175682604 23.723771444974336 14-15 23.66520199984541 24.04303098399621 24.64978603394727 27.641980982211106 16-17 23.91249393253459 27.160366114467237 25.21369493024217 23.713445022755998 18-19 23.885957372562956 26.364276615351745 26.685172610322194 23.06459340176311 20-21 24.767613508744745 25.541590545752424 26.319255017974747 23.371540927528084 22-23 24.306437297259492 25.375570893955707 26.29593498748678 24.022056821298023 24-25 24.00753595581264 25.587133708192912 26.398695407930102 24.006634928064347 26-27 23.966493038826812 25.76729816514533 26.377366497316046 23.88884229871181 28-29 23.972441242332597 25.849517959568974 26.33600865982755 23.842032138270884 30-31 24.167174175454846 25.70315137436903 26.110315336797484 24.019359113378645 32-33 23.99856257627456 25.737163084297194 26.098608852959167 24.165665486469084 34-35 24.272925248691067 25.684934714767554 26.156257032846653 23.88588300369473 36-37 24.282117569123304 25.607729982867045 26.12696690934953 23.983185538660123 38-39 24.238996138486037 25.605965595281006 26.095996293061894 24.059041973171063 40-41 24.23557797104095 25.551399523333995 26.198567600042516 24.014454905582543 42-43 24.24124779949133 25.378031178175757 26.190952517045684 24.189768505287223 44-45 24.069102190116773 25.48899885437385 26.16963697978887 24.272261975720507 46-47 24.057527868349187 25.441940233559535 26.118148036180838 24.38238386191044 48-49 24.04588347262705 25.518848179735603 26.014323305354516 24.42094504228283 50-51 23.9491129653502 25.696055162045113 26.02383798671024 24.330993885894447 52-53 24.026738375656887 25.53293936615833 26.09705329123492 24.343268966949864 54-55 23.827929491804177 25.472305772476673 26.18705671800084 24.51270801771831 56-57 23.80514055852624 25.5140732632673 26.074707990488744 24.606078187717713 58-59 23.735771204840137 25.398367841536114 26.149992591576876 24.715868362046876 60-61 23.753844387527472 25.388323822418567 26.215537420426628 24.64229436962733 62-63 23.54514848562827 25.506352605350507 26.17570960451584 24.77278930450538 64-65 23.57224336883563 25.350067842605156 26.1311703749955 24.946518413563716 66-67 23.566599502121537 25.407140261791582 25.98054730596103 25.045712930125852 68-69 23.593941568768926 25.22444754286033 26.05646514438359 25.125145743987154 70-71 23.398122356884777 25.116965392078754 26.074521588188148 25.410390662848325 72-73 23.30807622466386 25.089307196696375 26.080932698788466 25.52168387985129 74-75 23.159363854921313 25.170143644810107 26.080772956984426 25.589719543284158 76-77 23.22597876162264 24.967394271502087 26.219591457082487 25.587035509792795 78-79 23.17141225633971 24.98559211481318 26.133993091905726 25.709002536941384 80-81 23.032242398973207 24.99487228507309 26.152883240850333 25.82000207510337 82-83 22.919284693678684 24.918797883251237 26.179305465377677 25.982611957692402 84-85 22.876086827301858 24.80866856037749 26.148075697998152 26.16716891432249 86-87 22.730937221883217 24.77527652324483 26.225874676341736 26.267911578530217 88-89 22.686401519004836 24.707907383812344 26.11779053226786 26.487900564914963 90-91 22.51743065809425 24.58455050481642 26.299596038516892 26.59842279857244 92-93 22.492031750576082 24.53240003720846 26.233903846978762 26.741664365236694 94-95 22.328021414490802 24.414803220626453 26.297540296853022 26.95963506802972 96-97 22.34340051458182 24.231057034819525 26.34825575782667 27.077286692771985 98-99 22.284117412002473 24.23745403687808 26.256385367877876 27.222043183241567 100-101 22.386399289840593 24.009197107058597 26.308257740412145 27.296145862688665 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 147.0 1 107.5 2 107.0 3 159.5 4 132.5 5 132.5 6 245.5 7 499.0 8 768.5 9 815.5 10 685.0 11 567.0 12 592.5 13 673.5 14 727.0 15 809.0 16 927.0 17 1033.5 18 1101.5 19 1250.5 20 1472.0 21 1687.5 22 2006.0 23 2435.5 24 2999.0 25 3796.0 26 4959.5 27 6483.0 28 8570.0 29 11633.5 30 16192.0 31 22326.0 32 30095.5 33 38111.5 34 45382.0 35 53245.5 36 63635.5 37 73894.5 38 83948.0 39 93239.5 40 101715.5 41 111994.5 42 122192.0 43 134045.5 44 145227.5 45 153685.5 46 163370.5 47 173033.0 48 181046.5 49 188425.0 50 193386.5 51 193951.0 52 191201.5 53 188061.0 54 182978.5 55 174051.5 56 161084.5 57 145057.0 58 130573.0 59 116092.5 60 98182.0 61 80586.5 62 64955.0 63 49438.5 64 36324.5 65 27189.0 66 20152.0 67 14851.0 68 11159.0 69 8394.0 70 6300.5 71 4789.5 72 3734.0 73 3133.5 74 2411.0 75 1669.5 76 1136.5 77 611.5 78 300.5 79 145.0 80 81.0 81 43.5 82 24.0 83 11.5 84 8.5 85 7.0 86 3.0 87 0.5 88 1.0 89 1.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1872566989655256 2 0.0 3 0.012559022000380855 4 0.013231397939215774 5 0.006915866799444905 6 0.10707586825946123 7 0.14398450461622103 8 0.12561423343019548 9 0.14398450461622103 10-11 0.11646511797676316 12-13 0.11516839295186725 14-15 0.11803799740510913 16-17 0.06716555360433125 18-19 0.08000073000816216 20-21 0.03726883775256421 22-23 0.08495950255706972 24-25 0.05818453213560766 26-27 0.0661329762696919 28-29 0.040042388500258264 30-31 0.024649782186215958 32-33 0.03202190408701313 34-35 0.020123251312273716 36-37 0.024397641209152863 38-39 0.031997890660626166 40-41 0.02508202386118126 42-43 0.0126550757059287 44-45 0.026690923429107685 46-47 0.03399100505074397 48-49 0.008500752940984364 50-51 0.014516116250918212 52-53 0.00683181980709054 54-55 0.012222834030963393 56-57 0.0052229202391641215 58-59 0.0037941213691399136 60-61 0.023112922897450424 62-63 0.009977578663782495 64-65 0.006891853373057945 66-67 0.040210482484966996 68-69 0.09096285915381008 70-71 0.02223643283432633 72-73 0.045109221467907135 74-75 0.08616017387641778 76-77 0.24395239866514168 78-79 0.08214993166979521 80-81 0.016545250780616458 82-83 0.011970693053900297 84-85 0.01331544493157014 86-87 0.26038958902701675 88-89 0.6204589109863107 90-91 0.2664169590501441 92-93 0.3540299452229731 94-95 0.0012967250248959198 96-97 0.004298403323266104 98-99 0.003097732003918031 100-101 0.004838705416972737 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4164337.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.9917531378922 #Duplication Level Percentage of deduplicated Percentage of total 1 67.53108245849702 27.682174612733522 2 12.233075832490988 10.029104492851712 3 6.0568502966508 7.448427364604362 4 3.644891848293854 5.976420274383091 5 2.373416151024056 4.864524447813219 6 1.6901533348504152 4.156940896042408 7 1.1542584548990467 3.312055434838262 8 0.8964763741193242 2.9398510577481627 9 0.7029304102256386 2.5932914864178005 >10 3.557943076628061 24.564132437390242 >50 0.11770470965261604 3.262522508218969 >100 0.04021599213953974 2.7592855009143005 >500 7.066310096934234E-4 0.19083794318375957 >1k 2.944295188687309E-4 0.22043154286020641 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.4013426386961477E-5 0.0 10-11 0.0 0.0 0.0 2.4013426386961477E-5 0.0 12-13 0.0 0.0 0.0 3.602013958044221E-5 0.0 14-15 0.0 0.0 0.0 4.802685277392295E-5 1.2006713193480738E-5 16-17 0.0 2.4013426386961477E-5 0.0 4.802685277392295E-5 2.4013426386961477E-5 18-19 0.0 2.4013426386961477E-5 0.0 7.204027916088444E-5 2.4013426386961477E-5 20-21 0.0 2.4013426386961477E-5 0.0 1.0806041874132665E-4 7.204027916088444E-5 22-23 0.0 2.4013426386961477E-5 0.0 2.8816111664353776E-4 7.204027916088444E-5 24-25 0.0 2.4013426386961477E-5 0.0 0.0010325773346393434 7.204027916088444E-5 26-27 0.0 2.4013426386961477E-5 0.0 0.0019931143901178025 7.204027916088444E-5 28-29 0.0 2.4013426386961477E-5 0.0 0.0070839607841536355 7.204027916088444E-5 30-31 0.0 2.4013426386961477E-5 0.0 0.027555406779038297 7.204027916088444E-5 32-33 0.0 3.602013958044221E-5 0.0 0.0714399435012104 7.204027916088444E-5 34-35 0.0 4.802685277392295E-5 0.0 0.13021280458329862 7.204027916088444E-5 36-37 0.0 4.802685277392295E-5 0.0 0.229400262274643 7.204027916088444E-5 38-39 0.0 4.802685277392295E-5 0.0 0.3886332926465846 7.204027916088444E-5 40-41 0.0 4.802685277392295E-5 0.0 0.5754697566503384 7.204027916088444E-5 42-43 0.0 4.802685277392295E-5 0.0 0.7673250267689671 7.204027916088444E-5 44-45 0.0 4.802685277392295E-5 0.0 0.9927750804029549 7.204027916088444E-5 46-47 0.0 4.802685277392295E-5 0.0 1.2628060601243367 9.60537055478459E-5 48-49 0.0 4.802685277392295E-5 0.0 1.5576909361562237 9.60537055478459E-5 50-51 0.0 4.802685277392295E-5 0.0 1.870970096800523 9.60537055478459E-5 52-53 0.0 4.802685277392295E-5 0.0 2.193782587720446 9.60537055478459E-5 54-55 0.0 4.802685277392295E-5 0.0 2.5550645877122817 9.60537055478459E-5 56-57 0.0 4.802685277392295E-5 0.0 2.969308199600561 9.60537055478459E-5 58-59 0.0 4.802685277392295E-5 0.0 3.42294583747665 9.60537055478459E-5 60-61 0.0 4.802685277392295E-5 0.0 3.907572802105113 9.60537055478459E-5 62-63 0.0 4.802685277392295E-5 0.0 4.396330076072134 9.60537055478459E-5 64-65 0.0 4.802685277392295E-5 0.0 4.91787768377055 9.60537055478459E-5 66-67 0.0 4.802685277392295E-5 0.0 5.507647435834324 9.60537055478459E-5 68-69 0.0 4.802685277392295E-5 0.0 6.157870988827273 9.60537055478459E-5 70-71 0.0 4.802685277392295E-5 0.0 6.851210648898012 1.2006713193480739E-4 72-73 0.0 4.802685277392295E-5 0.0 7.558129901590577 1.2006713193480739E-4 74-75 0.0 4.802685277392295E-5 0.0 8.28463210350171 1.2006713193480739E-4 76-77 0.0 4.802685277392295E-5 0.0 9.069282817408869 1.2006713193480739E-4 78-79 0.0 4.802685277392295E-5 0.0 9.933646100207548 1.2006713193480739E-4 80-81 0.0 4.802685277392295E-5 0.0 10.8393124763918 1.3207384512828812E-4 82-83 0.0 6.003356596740369E-5 0.0 11.754212015021839 1.4408055832176888E-4 84-85 0.0 7.204027916088444E-5 0.0 12.669039513372716 1.4408055832176888E-4 86-87 0.0 7.204027916088444E-5 0.0 13.615684801686319 1.4408055832176888E-4 88-89 0.0 7.204027916088444E-5 0.0 14.633998161051807 1.4408055832176888E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8285 0.0 41.269268 1 GGTATCA 4680 0.0 36.885117 1 ATCAACG 9920 0.0 33.451744 3 TCAACGC 9995 0.0 33.20073 4 CAACGCA 10085 0.0 32.663967 5 TATCAAC 10660 0.0 31.661325 2 AACGCAG 10790 0.0 30.750084 6 GTACATG 14620 0.0 25.826378 1 ACGCAGA 12840 0.0 25.174883 7 TACATGG 15170 0.0 24.939596 2 CGCAGAG 13455 0.0 23.95162 8 ACATGGG 15860 0.0 23.228 3 GCAGAGT 15100 0.0 20.39936 9 CATGGGG 10695 0.0 18.732033 4 TAAGGCG 710 0.0 18.719103 5 GAGTACA 11520 0.0 18.658482 1 AGAGTAC 12550 0.0 17.886356 10-11 CCGATCG 425 3.6379788E-12 17.86816 9 AGTACAT 11330 0.0 17.429306 2 GAGTACT 5175 0.0 16.459406 12-13 >>END_MODULE