##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920877_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3914341 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.27333208833875 31.0 30.0 34.0 27.0 34.0 2 30.299419749071426 31.0 30.0 34.0 26.0 34.0 3 30.43685335539239 31.0 30.0 34.0 27.0 34.0 4 34.076202865309895 35.0 35.0 37.0 30.0 37.0 5 33.602968673398664 35.0 35.0 37.0 28.0 37.0 6 33.54649122291594 35.0 35.0 37.0 28.0 37.0 7 33.36741893463038 35.0 35.0 37.0 27.0 37.0 8 33.29813805184576 35.0 35.0 37.0 27.0 37.0 9 34.63879462724377 38.0 35.0 39.0 27.0 39.0 10-11 34.45010731052813 38.0 34.0 39.0 27.0 39.0 12-13 34.27394176950858 37.0 34.0 39.0 27.0 39.0 14-15 35.19013826337562 38.0 34.0 40.0 26.0 41.0 16-17 35.06788524556241 38.0 34.0 40.0 25.5 41.0 18-19 34.97878135808811 38.5 34.0 40.0 25.0 41.0 20-21 34.86727510454506 38.5 34.0 40.0 25.0 41.0 22-23 34.72232861163603 38.0 34.0 40.0 24.5 41.0 24-25 34.55549120528845 38.0 33.5 40.0 24.0 41.0 26-27 34.37841772088839 38.0 33.0 40.0 23.5 41.0 28-29 34.32697662262946 38.0 33.0 40.0 23.5 41.0 30-31 34.32276160916997 38.0 33.0 40.0 23.0 41.0 32-33 34.187234326288895 38.0 33.0 40.0 23.0 41.0 34-35 34.02851744393245 38.0 33.0 40.0 22.0 41.0 36-37 33.84690117697973 38.0 33.0 40.0 20.0 41.0 38-39 33.67309708070911 38.0 33.0 40.0 19.0 41.0 40-41 33.45844562341401 38.0 32.0 40.0 18.0 41.0 42-43 33.48403996994641 38.0 32.5 40.0 18.0 41.0 44-45 33.3449235771743 38.0 32.0 40.0 16.5 41.0 46-47 33.11580736067706 38.0 32.0 40.0 15.0 41.0 48-49 32.872080383390205 37.5 31.5 40.0 13.5 41.0 50-51 32.632433658692484 37.0 31.0 40.0 10.5 41.0 52-53 32.380972046124754 37.0 31.0 40.0 9.0 41.0 54-55 32.107520780637145 37.0 31.0 40.0 8.0 41.0 56-57 31.795326467469238 36.0 30.0 39.5 7.0 41.0 58-59 31.47247723179968 36.0 30.0 39.0 4.0 41.0 60-61 31.15345175599162 35.5 29.5 39.0 2.0 40.0 62-63 30.838770306419395 35.0 29.0 39.0 2.0 40.0 64-65 30.4434101423458 35.0 29.0 38.5 2.0 40.0 66-67 30.02308319586873 34.5 28.0 38.0 2.0 40.0 68-69 29.589917051171575 34.0 28.0 37.0 2.0 40.0 70-71 29.16307738646173 34.0 28.0 37.0 2.0 39.0 72-73 28.727500235671855 34.0 26.5 36.0 2.0 39.0 74-75 28.287779986465154 34.0 26.0 36.0 2.0 38.5 76-77 26.80972953046247 31.5 25.0 34.5 2.0 36.5 78-79 27.644494437250103 33.0 26.0 35.0 2.0 37.0 80-81 27.67037478339266 33.0 26.0 35.0 2.0 37.0 82-83 27.332608349655793 33.0 26.0 35.0 2.0 36.0 84-85 27.01452109052328 33.0 25.5 35.0 2.0 36.0 86-87 26.4799217799369 33.0 25.0 35.0 2.0 35.0 88-89 26.1165590836363 32.5 24.0 35.0 2.0 35.0 90-91 25.7547691935884 32.0 23.0 35.0 2.0 35.0 92-93 25.44928788779516 32.0 20.0 35.0 2.0 35.0 94-95 25.073231739391126 32.0 19.0 34.0 2.0 35.0 96-97 24.551446718617512 32.0 14.0 34.0 2.0 35.0 98-99 23.9630162522887 32.0 2.0 34.0 2.0 35.0 100-101 21.80273639930706 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 91629.0 3 41556.0 4 21805.0 5 15402.0 6 13167.0 7 13032.0 8 14543.0 9 16870.0 10 19064.0 11 21687.0 12 23532.0 13 25975.0 14 27920.0 15 29694.0 16 31049.0 17 32189.0 18 32090.0 19 30961.0 20 31090.0 21 32129.0 22 35417.0 23 40012.0 24 47171.0 25 55810.0 26 65593.0 27 78553.0 28 92628.0 29 109084.0 30 128642.0 31 152898.0 32 183383.0 33 223469.0 34 282383.0 35 366633.0 36 495671.0 37 598585.0 38 365481.0 39 27541.0 40 3.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.419181405458644 19.142294836246027 13.434294026389942 25.004229731905387 2 16.13474656398101 20.622424055543448 37.94815014839024 25.294679232085297 3 19.25228362857217 24.114903098928238 29.297924262047705 27.33488901045189 4 13.796610923016427 16.472597410859855 35.94092098004783 33.78987068607589 5 14.553473156883005 36.858277662467465 34.22703084968202 14.361218330967512 6 33.809221301203735 35.26509374031371 17.032175632531015 13.893509325951545 7 29.34063794607143 31.428689843820155 20.880544561028643 18.350127649079774 8 26.62587219853501 34.66763285592568 20.014927675208984 18.691567270330324 9 26.60309504250317 15.688195279994947 19.370558541862433 38.33815113563945 10-11 25.70489371429302 25.320097573763782 27.820850477478427 21.154158234464767 12-13 26.261764541891974 22.583777042652876 27.53106135746662 23.623397057988534 14-15 23.32630007710195 24.311053994767196 24.859566134327736 27.50307979380312 16-17 23.713517252803886 27.20108228826662 25.654687768424665 23.430712690504823 18-19 23.640156933732698 26.566812529642398 26.8723066165031 22.920723920121805 20-21 24.356441109206976 25.80835642935301 26.638714189455897 23.196488271984112 22-23 24.043793741037334 25.65356746860246 26.495433219326287 23.80720557103392 24-25 23.793664317248858 25.83337103751425 26.538464782889104 23.834499862347787 26-27 23.692903023272105 26.019729929683145 26.474146168873965 23.81322087817079 28-29 23.786857258231464 26.162807042653085 26.369580829753136 23.68075486936231 30-31 23.972577973784865 25.969536845728484 26.196822901500898 23.861062278985745 32-33 23.724169144180777 25.955688797053227 26.20595531057338 24.11418674819261 34-35 24.049254058755672 25.968255639291787 26.18762194025852 23.794868361694018 36-37 24.19829621135412 25.700338905090604 26.18017229538725 23.921192588168026 38-39 23.93787523680504 25.853935659561937 26.293914509705907 23.91427459392711 40-41 24.142999495696042 25.676839926870176 26.32913863682564 23.851021940608145 42-43 24.001639836215674 25.63285273118452 26.202068549395214 24.163438883204595 44-45 23.9478965853499 25.59317611727932 26.32755178807622 24.13137550929456 46-47 23.954324378233547 25.560809147084534 26.269884278866932 24.214982195814986 48-49 23.691156594677043 25.68921995201827 26.30414232024098 24.315481133063702 50-51 23.676549232994535 25.789943958789152 26.33400336814499 24.199503440071318 52-53 23.893946733461895 25.523396214460103 26.29806655609072 24.28459049598728 54-55 23.52628484659412 25.5071690590784 26.47342132380201 24.49312477052547 56-57 23.43682076750693 25.61413315834271 26.408169715014722 24.540876359135634 58-59 23.448383692695117 25.43379087010334 26.400365133529093 24.71746030367245 60-61 23.40249677295628 25.457736810964036 26.506591499513917 24.633174916565764 62-63 23.348298332320066 25.464072313355146 26.43991220545283 24.747717148871953 64-65 23.137743438794896 25.413392297003984 26.317647826796218 25.131216437404902 66-67 23.128089607367166 25.470338491389867 26.2568386035882 25.144733297654774 68-69 23.313963746269916 25.377342569366135 26.207128008039337 25.10156567632461 70-71 23.090570237555436 25.25643831534991 26.211653073216052 25.441338373878597 72-73 23.06151012270025 25.302852901552775 26.14718866987532 25.488448305871653 74-75 23.003090568460554 25.44019569764846 25.96106911627947 25.595644617611512 76-77 22.97982815145835 25.29044918632736 26.181668421725956 25.548054240488327 78-79 22.904938017506204 25.422857778397084 26.092335187417625 25.57986901667909 80-81 22.91463717981165 25.474713078201738 25.970784076822333 25.639865665164272 82-83 22.83173425106343 25.444091695166883 25.98847761397669 25.735696439793 84-85 22.679308682705148 25.365986211009346 25.991635440416914 25.963069665868588 86-87 22.660453363789326 25.4126871313904 25.94184167143876 25.985017833381512 88-89 22.55176412625579 25.371790252700016 25.835140671608748 26.241304949435445 90-91 22.46765957861011 25.38695542808313 25.833414874928856 26.311970118377904 92-93 22.485281660964944 25.236144610437023 25.868692213662804 26.40988151493523 94-95 22.322429140716345 25.205212848972973 25.864004182623688 26.608353827686994 96-97 22.342444788180806 25.10398422349739 25.845302542004056 26.708268446317753 98-99 22.18031080617075 25.159010456265996 25.76982367825113 26.890855059312123 100-101 22.271214167215213 25.082754544394287 25.7970118816786 26.849019406711903 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 58.0 1 51.0 2 69.0 3 97.5 4 82.5 5 88.5 6 162.0 7 321.0 8 493.0 9 536.5 10 446.5 11 373.5 12 405.0 13 447.0 14 515.0 15 586.0 16 652.0 17 734.5 18 800.5 19 890.5 20 1055.0 21 1259.5 22 1480.0 23 1775.0 24 2150.5 25 2720.0 26 3589.5 27 4735.0 28 6284.0 29 8641.5 30 12681.0 31 18607.5 32 26509.0 33 34267.5 34 42517.5 35 52505.5 36 64008.5 37 76311.0 38 87899.0 39 98111.5 40 107794.5 41 118207.5 42 128182.5 43 137609.5 44 147096.0 45 156515.0 46 164319.5 47 170474.0 48 175849.5 49 178300.5 50 177606.0 51 176099.0 52 173643.0 53 170371.0 54 165497.0 55 156135.0 56 143124.5 57 128487.5 58 115482.5 59 101348.5 60 83675.5 61 67903.5 62 54495.5 63 41651.5 64 30599.0 65 22950.5 66 17430.0 67 13051.5 68 9745.5 69 7162.5 70 5184.0 71 3905.0 72 2847.0 73 2111.0 74 1613.0 75 1180.0 76 806.0 77 467.5 78 260.5 79 130.0 80 66.5 81 39.0 82 19.0 83 6.5 84 3.0 85 2.0 86 1.5 87 2.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19093890900154076 2 0.0 3 0.012875730550813022 4 0.013591048914747082 5 0.006769977372947324 6 0.10671017164830555 7 0.1425016369294346 8 0.12323913527206752 9 0.14239944859172976 10-11 0.11441261760280978 12-13 0.1149363328335472 14-15 0.11706951438313626 16-17 0.06716328495652268 18-19 0.08011565676061437 20-21 0.03856332394137353 22-23 0.08495682925938236 24-25 0.058962670855707264 26-27 0.06690781411226053 28-29 0.04115635301063448 30-31 0.02530438712416726 32-33 0.033530548309408915 34-35 0.02032270566105508 36-37 0.025636499221708072 38-39 0.03351777476719581 40-41 0.026224082163511048 42-43 0.013680463710238837 44-45 0.0277185866024447 46-47 0.03465462002416243 48-49 0.008967026633601927 50-51 0.01568590983769682 52-53 0.0073831073991765155 54-55 0.012977918888517887 56-57 0.005786414622537995 58-59 0.0039981187127028535 60-61 0.023746014974168065 62-63 0.010998019845486123 64-65 0.0074725221946682725 66-67 0.04156510636145395 68-69 0.09122863848601846 70-71 0.022366472415152383 72-73 0.045933657798336934 74-75 0.08711555789339763 76-77 0.25328656854372167 78-79 0.08062659844913869 80-81 0.01756362054302372 82-83 0.012300921151223157 84-85 0.014472423327451541 86-87 0.26994326758961473 88-89 0.6236681985550058 90-91 0.26576631928592837 92-93 0.3516556171268676 94-95 0.0013156748479501402 96-97 0.0042280424725388 98-99 0.0033977622286867704 100-101 0.005249925849587452 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3914341.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.42459956174785 #Duplication Level Percentage of deduplicated Percentage of total 1 73.32923454802902 40.64243460993994 2 13.499233661870294 14.96379240199256 3 5.442284872726185 9.049093793154201 4 2.6847088612187266 5.95195654291696 5 1.4597139935352392 4.045203178318521 6 0.9374291737321375 3.117398194296233 7 0.5994141473905816 2.325560236353864 8 0.39657045638321897 1.7583806994447604 9 0.30151104198398826 1.5040015888867104 >10 1.2745030855001198 12.001354246996991 >50 0.05365454089811693 2.029029689795855 >100 0.020399102685757033 1.9350898032425492 >500 9.258717829781554E-4 0.35726249091541923 >1k 4.166422638106741E-4 0.3194425237455175 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.109416885243263E-5 2 0.0 0.0 0.0 0.0 5.109416885243263E-5 3 0.0 0.0 0.0 0.0 5.109416885243263E-5 4 0.0 0.0 0.0 2.5547084426216314E-5 5.109416885243263E-5 5 2.5547084426216314E-5 0.0 0.0 2.5547084426216314E-5 5.109416885243263E-5 6 2.5547084426216314E-5 0.0 0.0 2.5547084426216314E-5 5.109416885243263E-5 7 2.5547084426216314E-5 0.0 0.0 1.2773542213108158E-4 7.664125327864895E-5 8 2.5547084426216314E-5 0.0 0.0 2.8101792868837945E-4 7.664125327864895E-5 9 2.5547084426216314E-5 0.0 0.0 3.321120975408121E-4 7.664125327864895E-5 10-11 2.5547084426216314E-5 0.0 0.0 3.5765918196702844E-4 7.664125327864895E-5 12-13 2.5547084426216314E-5 0.0 0.0 4.343004352456774E-4 1.6605604877040605E-4 14-15 2.5547084426216314E-5 0.0 0.0 4.5984751967189367E-4 2.171502176228387E-4 16-17 2.5547084426216314E-5 0.0 0.0 5.237152307374345E-4 2.5547084426216316E-4 18-19 2.5547084426216314E-5 0.0 0.0 5.492623151636508E-4 2.937914709014876E-4 20-21 2.5547084426216314E-5 0.0 0.0 5.875829418029752E-4 3.193385553277039E-4 22-23 2.5547084426216314E-5 0.0 0.0 6.897712795078405E-4 3.5765918196702844E-4 24-25 2.5547084426216314E-5 0.0 0.0 9.196950393437873E-4 3.8320626639324473E-4 26-27 2.5547084426216314E-5 0.0 0.0 0.0016477869454909525 4.0875335081946103E-4 28-29 2.5547084426216314E-5 0.0 0.0 0.006220715057783673 4.0875335081946103E-4 30-31 2.5547084426216314E-5 0.0 0.0 0.027705813060231593 4.215268930325692E-4 32-33 2.5547084426216314E-5 0.0 0.0 0.08102257825774505 4.8539460409811E-4 34-35 2.5547084426216314E-5 0.0 0.0 0.15154530481631517 4.8539460409811E-4 36-37 2.5547084426216314E-5 0.0 0.0 0.26788672729330426 4.8539460409811E-4 38-39 2.5547084426216314E-5 0.0 0.0 0.46269601958541684 5.364887729505427E-4 40-41 2.5547084426216314E-5 0.0 0.0 0.6892475642771031 5.364887729505427E-4 42-43 2.5547084426216314E-5 0.0 0.0 0.9352148931327138 5.364887729505427E-4 44-45 2.5547084426216314E-5 0.0 0.0 1.2295173057227258 5.492623151636508E-4 46-47 2.5547084426216314E-5 0.0 0.0 1.5764850328573827 5.620358573767589E-4 48-49 2.5547084426216314E-5 0.0 0.0 1.9372098649555571 5.875829418029752E-4 50-51 2.5547084426216314E-5 0.0 0.0 2.327875880001257 6.131300262291916E-4 52-53 2.5547084426216314E-5 0.0 0.0 2.729437726554738 6.642241950816242E-4 54-55 2.5547084426216314E-5 0.0 0.0 3.180726972943849 6.897712795078405E-4 56-57 2.5547084426216314E-5 0.0 0.0 3.703445867388661 7.025448217209487E-4 58-59 2.5547084426216314E-5 0.0 0.0 4.255646097261327 7.153183639340569E-4 60-61 2.5547084426216314E-5 0.0 0.0 4.832997431751602 7.153183639340569E-4 62-63 2.5547084426216314E-5 0.0 0.0 5.427107653625477 7.408654483602731E-4 64-65 2.5547084426216314E-5 0.0 0.0 6.069604053402603 7.664125327864895E-4 66-67 2.5547084426216314E-5 0.0 0.0 6.795090156938294 7.791860749995976E-4 68-69 2.5547084426216314E-5 0.0 0.0 7.575655774496908 8.047331594258139E-4 70-71 2.5547084426216314E-5 0.0 0.0 8.386980081704685 8.175067016389221E-4 72-73 2.5547084426216314E-5 0.0 0.0 9.223519361241138 9.069214971306793E-4 74-75 2.5547084426216314E-5 0.0 0.0 10.088824657841512 9.7078920819622E-4 76-77 2.5547084426216314E-5 0.0 0.0 11.036634263596351 9.83562750409328E-4 78-79 2.5547084426216314E-5 0.0 0.0 12.052654584769186 9.963362926224363E-4 80-81 2.5547084426216314E-5 0.0 0.0 13.091079698983814 9.963362926224363E-4 82-83 2.5547084426216314E-5 0.0 0.0 14.143862274645976 0.0010985246303273017 84-85 2.5547084426216314E-5 0.0 0.0 15.222332443698697 0.0010985246303273017 86-87 2.5547084426216314E-5 0.0 0.0 16.337896979338282 0.001136845256966626 88-89 2.5547084426216314E-5 0.0 0.0 17.52068866764546 0.0011879394258190587 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5265 0.0 42.36039 1 GGTATCA 2900 0.0 41.97855 1 TCAACGC 6425 0.0 33.76327 4 ATCAACG 6470 0.0 33.748543 3 TATCAAC 6630 0.0 33.00443 2 CAACGCA 6655 0.0 32.520912 5 AACGCAG 7185 0.0 30.386242 6 GTACATG 10580 0.0 26.653519 1 TACATGG 10950 0.0 25.22863 2 ACGCAGA 8550 0.0 24.924482 7 TATTACG 115 1.2887293E-4 24.764992 2 CGCAGAG 8835 0.0 24.011183 8 ACATGGG 11380 0.0 23.692318 3 CATGGGG 8500 0.0 20.048275 4 GAGTACA 7905 0.0 19.611067 1 GCAGAGT 10715 0.0 19.13393 9 AGTACAT 7720 0.0 18.691368 2 TAAGGCG 980 0.0 17.919321 5 AGAGTAC 8665 0.0 17.525219 10-11 TAAGGTG 1635 0.0 17.417244 5 >>END_MODULE