##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920876_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3057296 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.516002703042165 31.0 29.0 33.0 20.0 34.0 2 28.54128681030558 31.0 28.0 34.0 16.0 34.0 3 28.612894531638414 31.0 28.0 34.0 18.0 34.0 4 32.07786226783406 35.0 32.0 37.0 22.0 37.0 5 32.03659442854077 35.0 32.0 37.0 22.0 37.0 6 32.163969075941615 35.0 32.0 37.0 23.0 37.0 7 31.99664180373768 35.0 32.0 37.0 21.0 37.0 8 31.93218549986655 35.0 32.0 37.0 19.0 37.0 9 33.18340618638169 37.0 33.0 39.0 19.0 39.0 10-11 32.99615722520816 37.0 32.0 39.0 18.0 39.0 12-13 32.82425466817737 37.0 32.0 39.0 17.0 39.0 14-15 33.58075894515939 38.0 32.0 40.0 17.0 41.0 16-17 33.46886987717251 38.0 32.0 40.0 17.0 41.0 18-19 33.353836854527664 38.0 32.0 40.0 17.0 41.0 20-21 33.25771335192928 38.0 32.0 40.0 16.0 41.0 22-23 33.03510618533501 38.0 32.0 40.0 11.5 41.0 24-25 32.84891469455361 38.0 32.0 40.0 10.0 41.0 26-27 32.87190445413202 38.0 32.0 40.0 10.0 41.0 28-29 32.71014026773986 38.0 31.5 40.0 9.5 41.0 30-31 32.46729283000403 38.0 31.0 40.0 9.0 41.0 32-33 32.23044072278249 37.0 30.5 40.0 8.0 41.0 34-35 31.91118082776414 37.0 30.0 40.0 5.0 41.0 36-37 31.60891912330373 37.0 30.0 40.0 2.0 41.0 38-39 31.41359930474511 37.0 30.0 40.0 2.0 41.0 40-41 31.209607280420343 37.0 30.0 40.0 2.0 41.0 42-43 30.97660383554618 36.0 29.5 40.0 2.0 41.0 44-45 30.697662738576835 36.0 29.0 39.0 2.0 41.0 46-47 30.448137013884164 36.0 28.0 39.0 2.0 40.0 48-49 30.145524836325954 35.5 28.0 39.0 2.0 40.0 50-51 28.99131928998697 34.0 25.5 38.0 2.0 39.5 52-53 29.43751357408638 34.5 27.5 38.5 2.0 39.5 54-55 30.08060930312276 35.0 28.0 39.0 2.0 40.0 56-57 30.0281992649714 35.0 28.0 39.0 2.0 40.5 58-59 29.77601743501447 35.0 28.0 39.0 2.0 40.0 60-61 29.444446007190667 35.0 27.0 39.0 2.0 40.0 62-63 29.045957931453152 34.5 26.0 38.5 2.0 40.0 64-65 28.62069407083907 34.0 26.0 38.0 2.0 40.0 66-67 28.229812716858298 34.0 26.0 37.5 2.0 40.0 68-69 27.780948099235403 34.0 25.0 37.0 2.0 39.0 70-71 27.453954572929803 33.5 24.5 36.0 2.0 39.0 72-73 26.993089808772197 33.0 23.5 36.0 2.0 39.0 74-75 26.563713817700346 33.0 22.5 35.0 2.0 38.0 76-77 26.155302430644596 32.5 21.5 35.0 2.0 37.0 78-79 25.708882293372966 32.0 20.0 35.0 2.0 37.0 80-81 25.281471273962353 32.0 18.5 35.0 2.0 36.0 82-83 24.82448477347303 32.0 16.0 35.0 2.0 36.0 84-85 24.440755654670006 31.0 9.0 34.5 2.0 35.0 86-87 24.003050898571807 31.0 4.5 34.0 2.0 35.0 88-89 23.48835114427913 31.0 2.0 34.0 2.0 35.0 90-91 23.004393261234764 31.0 2.0 34.0 2.0 35.0 92-93 22.47982073047556 30.0 2.0 34.0 2.0 35.0 94-95 21.85908937178474 30.0 2.0 34.0 2.0 35.0 96-97 21.225841724190264 29.0 2.0 34.0 2.0 35.0 98 20.83022808390159 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 165143.0 3 27536.0 4 20219.0 5 16086.0 6 15391.0 7 15345.0 8 17597.0 9 20066.0 10 21973.0 11 23396.0 12 24213.0 13 24162.0 14 22565.0 15 23569.0 16 25440.0 17 26941.0 18 27863.0 19 28003.0 20 28768.0 21 30495.0 22 33312.0 23 37261.0 24 42264.0 25 48837.0 26 57033.0 27 65874.0 28 76143.0 29 87851.0 30 102806.0 31 119968.0 32 143645.0 33 174286.0 34 218041.0 35 275382.0 36 350908.0 37 381191.0 38 217781.0 39 19940.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.47672089635943 17.599662985246738 12.924863834744565 24.998752283649267 2 16.18129584244089 19.275884508211767 38.761974775963196 25.780844873384158 3 19.538347086673525 23.274845651144105 28.671134212186168 28.515673049996202 4 13.60208688620104 15.195385505706453 35.744665259750136 35.45786234834237 5 14.805773151625711 36.606303931909366 33.64415474286731 14.943768173597608 6 34.3118266553686 34.183676473956105 16.87011912045201 14.63437775022329 7 29.861012515612618 31.1940636386417 20.398963367837577 18.545960477908103 8 27.38353972249991 33.849011844260794 19.650782726116518 19.11666570712278 9 27.24355116416598 15.515017191662176 19.033158712797192 38.20827293137465 10-11 26.13066025184677 24.887976971804 27.11028423650903 21.871078539840195 12-13 26.669522277279135 22.22433748934257 27.089310121438686 24.01683011193961 14-15 23.86804010811902 23.79274211763005 24.456473296607843 27.88274447764309 16-17 24.031676549710053 26.833329626101705 25.192307189063577 23.94268663512467 18-19 24.11617558038709 25.988204113018014 26.579601786561526 23.316018520033374 20-21 24.782883737373655 25.281202406974433 26.293454145794954 23.642459709856958 22-23 24.556953902251642 25.055123439015038 26.15507116812907 24.232851490604254 24-25 24.28491450885694 25.30525069988657 26.148354843107093 24.261479948149397 26-27 24.01089623389587 25.546166031724056 26.10410374728253 24.338833987097548 28-29 24.17604841313361 25.610216477673546 26.07890698010446 24.134828129088383 30-31 24.330846894968257 25.483983343311923 25.83102222249857 24.354147539221252 32-33 24.10229063698961 25.532648549530414 25.785520740214267 24.579540073265704 34-35 24.50267192765242 25.524707843808127 25.81458717425497 24.158033054284477 36-37 24.609523471335024 25.232572897062283 25.79680095955431 24.361102672048375 38-39 24.34322642090134 25.374003996584122 25.813723555411975 24.469046027102564 40-41 24.534969290471352 25.23727699971833 25.971991831827413 24.25576187798291 42-43 24.394685919638356 25.15311989432678 25.81140937646133 24.640784809573532 44-45 24.232375747164014 25.240641781479084 25.931330780784652 24.595651690572247 46-47 24.472899269536033 25.24139301293193 25.758440319443544 24.527267398088494 48-49 24.268401327561346 25.30316558428232 25.691963604039426 24.73646948411691 50-51 24.11702548246726 25.515697835546735 25.86126956565141 24.5060071163346 52-53 24.342456963044718 25.25005018910862 25.939160614676116 24.468332233170546 54-55 23.95306451157139 25.210730965541124 26.119911784439655 24.71629273844783 56-57 23.94591293882383 25.316089801956913 26.10054960143057 24.63744765778869 58-59 23.918560648046654 24.992639192339176 26.174621511621705 24.914178647992465 60-61 23.82573626238628 25.01196460251406 26.34674452773406 24.8155546073656 62-63 23.842179007392236 25.098903307515762 26.339256612313978 24.719661072778024 64-65 23.734689096537178 25.01832593450766 26.25929809124426 24.9876868777109 66-67 23.5928094711644 25.032814781999424 26.296997274910645 25.07737847192553 68-69 23.84647925858315 24.812121693839405 26.29815115462924 25.043247892948205 70-71 23.60337905428897 24.68654186013452 26.41318397171843 25.29689511385808 72-73 23.550512042581722 24.785930174444896 26.3817763885139 25.281781394459486 74-75 23.670341734543424 24.886125408511813 26.37449918071997 25.069033676224795 76-77 23.648788242836837 24.686937913024444 26.447332168346836 25.216941675791883 78-79 23.60998634859668 24.67357819214986 26.497244201927867 25.21919125732559 80-81 23.62601751178046 24.689611413365036 26.50675118871439 25.177619886140114 82-83 23.655048931033747 24.591541159344654 26.55483837085834 25.19857153876326 84-85 23.576998671316186 24.57603892045753 26.63216727761614 25.214795130610145 86-87 23.666299316584443 24.636517048631987 26.582712185695794 25.114471449087773 88-89 23.528620886141095 24.378770922757614 26.61591627564449 25.4766919154568 90-91 23.48684701837027 24.46680262115884 26.680524724158733 25.365825636312163 92-93 23.722405645746537 24.26268174273464 26.6979695623076 25.316943049211226 94-95 23.558217666107 24.139089531931376 26.823668821630385 25.479023980331238 96-97 23.743835912760872 23.888937943729758 26.878587955858524 25.488638187650853 98 23.779623392604464 23.787862028128867 26.80333392305771 25.62918065620896 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 75.0 2 103.5 3 149.5 4 142.0 5 162.0 6 278.0 7 528.0 8 832.5 9 946.0 10 917.0 11 934.5 12 1021.0 13 1174.0 14 1338.5 15 1492.0 16 1624.5 17 1717.0 18 1740.0 19 1721.0 20 1661.0 21 1627.5 22 1747.5 23 1985.5 24 2313.0 25 2761.0 26 3472.0 27 4494.0 28 6068.0 29 8470.5 30 12038.5 31 17345.0 32 22664.5 33 27701.0 34 34292.5 35 42416.5 36 51414.5 37 59657.5 38 67487.5 39 74951.5 40 81480.0 41 88353.0 42 96791.0 43 106382.0 44 115257.0 45 123999.5 46 131461.5 47 136580.0 48 140962.5 49 143032.5 50 143007.0 51 142536.5 52 141611.0 53 141328.0 54 138334.0 55 132258.5 56 121905.0 57 109984.0 58 99982.5 59 86457.0 60 71651.5 61 58720.0 62 48028.0 63 37309.5 64 26950.5 65 19915.5 66 14923.0 67 11088.0 68 8111.5 69 5910.5 70 4224.5 71 2963.0 72 2163.5 73 1600.5 74 1175.5 75 857.5 76 576.0 77 355.0 78 218.5 79 114.5 80 63.0 81 42.0 82 31.0 83 21.0 84 15.0 85 13.0 86 11.5 87 7.0 88 4.5 89 6.5 90 4.5 91 2.0 92 3.5 93 3.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3837377865931202 2 0.025087528325683874 3 0.01910184686075539 4 0.01612536044923357 5 0.021718538211543795 6 0.023746474008404815 7 0.015503896253421325 8 0.009420088862838273 9 0.0 10-11 1.6354320942427554E-5 12-13 0.005118902454979825 14-15 0.0035815962863916346 16-17 0.0068033975120498635 18-19 0.037484103600043964 20-21 0.07926939360794637 22-23 0.09860020096189574 24-25 0.0647467566110707 26-27 0.0750826874466849 28-29 0.05761627268017228 30-31 0.051892260350322635 32-33 0.02006675179635861 34-35 0.3381582941265746 36-37 0.5195440676990386 38-39 0.47255810363144424 40-41 0.4826160110110372 42-43 0.4315741753497208 44-45 0.4044587112271759 46-47 0.4027578618491634 48-49 0.3929289149627645 50-51 0.3894945075648547 52-53 0.4516082185041946 54-55 0.4527530209701645 56-57 0.4222031494497098 58-59 0.4073370717130431 60-61 0.4219087716727461 62-63 0.40154764209942384 64-65 0.4512157148015763 66-67 0.47296696165500496 68-69 0.41340452478268375 70-71 0.3714066286025298 72-73 0.35712930641979057 74-75 0.3406114422679387 76-77 0.33809287684280487 78-79 0.338747049680502 80-81 0.35431636321769305 82-83 0.34870683113444034 84-85 0.34906662619517376 86-87 0.33519816203599523 88-89 0.3774413730302856 90-91 0.3576199360480634 92-93 0.3471368163239673 94-95 0.3545943866737143 96-97 0.3538747965522475 98 0.3491647521208283 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3057296.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.539323993009994 #Duplication Level Percentage of deduplicated Percentage of total 1 74.7682524352711 40.030416915231385 2 11.886533833917333 12.727939721759506 3 5.033105785820468 8.084072440744055 4 2.5957679364478805 5.559026422406002 5 1.5288953798817964 4.09280125474538 6 0.973666061990326 3.127765365233893 7 0.6764377527895706 2.5351214005393095 8 0.46937567300917216 2.010404498534015 9 0.35239401964952083 1.6980243832093345 >10 1.6203922014456247 14.835859905691992 >50 0.0727613952511287 2.6109950369475814 >100 0.020633970253732918 1.823023325673977 >500 0.001230037429490657 0.4518337103762371 >1k 5.535168428606818E-4 0.4127156189074809 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.3083456753942046E-4 0.0 5 0.0 0.0 0.0 1.3083456753942046E-4 0.0 6 0.0 0.0 0.0 1.3083456753942046E-4 3.2708641884855116E-5 7 0.0 0.0 0.0 2.289604931939858E-4 6.541728376971023E-5 8 0.0 0.0 0.0 3.5979506073340625E-4 9.812592565456534E-5 9 0.0 0.0 0.0 4.579209863879716E-4 1.6354320942427557E-4 10-11 0.0 0.0 0.0 5.396925911001094E-4 1.6354320942427557E-4 12-13 0.0 0.0 0.0 8.013617261789503E-4 1.6354320942427557E-4 14-15 0.0 0.0 0.0 8.994876518335156E-4 2.7802345602126845E-4 16-17 0.0 0.0 0.0 0.001030322219372936 3.5979506073340625E-4 18-19 0.0 0.0 0.0 0.001324699996336632 3.5979506073340625E-4 20-21 0.0 0.0 0.0 0.0013410543172790597 3.5979506073340625E-4 22-23 0.0 0.0 0.0 0.0015700148104730454 4.7427530733039916E-4 24-25 1.6354320942427558E-5 0.0 0.0 0.002322313573824713 7.032358005243849E-4 26-27 3.2708641884855116E-5 0.0 0.0 0.0034016987560249318 7.195901214668125E-4 28-29 3.2708641884855116E-5 0.0 0.0 0.008177160471213779 7.195901214668125E-4 30-31 3.2708641884855116E-5 0.0 0.0 0.028211203625687537 7.359444424092401E-4 32-33 3.2708641884855116E-5 0.0 0.0 0.07173005165348727 8.177160471213779E-4 34-35 3.2708641884855116E-5 0.0 0.0 0.13011497741795364 8.504246890062329E-4 36-37 3.2708641884855116E-5 1.6354320942427558E-5 0.0 0.22644192776885197 8.831333308910881E-4 38-39 3.2708641884855116E-5 3.2708641884855116E-5 0.0 0.3853895730083054 8.831333308910881E-4 40-41 3.2708641884855116E-5 3.2708641884855116E-5 0.0 0.5728918626132373 8.831333308910881E-4 42-43 3.2708641884855116E-5 3.2708641884855116E-5 0.0 0.7726598929249899 8.831333308910881E-4 44-45 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.01815460459177 8.994876518335156E-4 46-47 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.3083947383570318 9.812592565456534E-4 48-49 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.6185544350301706 0.0010793851822002187 50-51 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.9635488353106796 0.0010793851822002187 52-53 3.2708641884855116E-5 3.2708641884855116E-5 0.0 2.302770160298512 0.001144802465969929 54-55 3.2708641884855116E-5 3.2708641884855116E-5 0.0 2.6812418555481705 0.0012429283916244945 56-57 3.2708641884855116E-5 3.2708641884855116E-5 1.6354320942427558E-5 3.1315253740560287 0.0012756370335093494 58-59 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 3.608221120885907 0.0013083456753942046 60-61 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 4.116398935529959 0.0013083456753942046 62-63 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 4.634896326688682 0.0013410543172790597 64-65 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 5.186331320225454 0.0013410543172790597 66-67 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 5.820388343163371 0.0013737629591639147 68-69 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 6.517507627655288 0.0014064716010487698 70-71 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 7.246158042924205 0.0015045975267033353 72-73 3.2708641884855116E-5 3.2708641884855116E-5 3.2708641884855116E-5 7.993027171722986 0.0017989753036670312 74-75 3.2708641884855116E-5 4.906296282728268E-5 3.2708641884855116E-5 8.748433256053715 0.0017989753036670312 76-77 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 9.573917605622746 0.0017989753036670312 78-79 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 10.480552095708102 0.0017989753036670312 80-81 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 11.423591304211303 0.0018643925874367415 82-83 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 12.383491817606146 0.0019461641921488793 84-85 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 13.339630837184231 0.0019625185130913068 86 3.2708641884855116E-5 6.541728376971023E-5 3.2708641884855116E-5 14.06438892406885 0.001995227154976162 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2700 0.0 46.201675 1 GTATCAA 4830 0.0 42.21908 1 TCAACGC 5870 0.0 34.68813 4 CAACGCA 6060 0.0 33.524868 5 ATCAACG 6035 0.0 33.511765 3 TATCAAC 6410 0.0 31.482794 2 AACGCAG 6555 0.0 31.128073 6 GTACATG 10395 0.0 28.606205 1 TACATGG 10505 0.0 27.462069 2 ACATGGG 10680 0.0 25.89298 3 ACGCAGA 7905 0.0 24.937527 7 CGCAGAG 8205 0.0 23.85616 8 CATGGGG 7600 0.0 22.205992 4 GCAGAGT 9395 0.0 20.00499 9 TAAGGTG 1450 0.0 19.292913 5 GAGTACA 7320 0.0 18.173515 1 AGAGTAC 7550 0.0 17.517473 10-11 AGTACAT 7505 0.0 16.92808 2 CAGAGTA 8425 0.0 16.813616 10-11 GTAAGGT 1210 0.0 16.67644 4 >>END_MODULE