##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920876_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3057296 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.20845838937414 31.0 30.0 34.0 26.0 34.0 2 30.22926599190919 31.0 30.0 34.0 26.0 34.0 3 30.363312220995283 31.0 30.0 34.0 26.0 34.0 4 34.003801398359855 35.0 35.0 37.0 30.0 37.0 5 33.51572533375898 35.0 35.0 37.0 28.0 37.0 6 33.46280373244854 35.0 35.0 37.0 28.0 37.0 7 33.27588660044693 35.0 33.0 37.0 27.0 37.0 8 33.20247630585982 35.0 33.0 37.0 27.0 37.0 9 34.531206006876666 38.0 34.0 39.0 27.0 39.0 10-11 34.335927074120406 37.5 34.0 39.0 27.0 39.0 12-13 34.155959383716855 37.0 34.0 39.0 26.0 39.0 14-15 35.05728362579221 38.0 34.0 40.0 26.0 41.0 16-17 34.92749933274371 38.0 34.0 40.0 25.0 41.0 18-19 34.8298516074335 38.0 33.5 40.0 25.0 41.0 20-21 34.7104984273685 38.0 34.0 40.0 24.5 41.0 22-23 34.566729063852506 38.0 33.5 40.0 24.0 41.0 24-25 34.386900875806596 38.0 33.0 40.0 23.5 41.0 26-27 34.19422882180855 38.0 33.0 40.0 22.5 41.0 28-29 34.13770354587845 38.0 33.0 40.0 22.5 41.0 30-31 34.12225018447674 38.0 33.0 40.0 22.0 41.0 32-33 33.97406466367666 38.0 33.0 40.0 21.0 41.0 34-35 33.81141407308942 38.0 33.0 40.0 19.5 41.0 36-37 33.61355410140202 38.0 32.5 40.0 18.5 41.0 38-39 33.43410533360198 38.0 32.0 40.0 18.0 41.0 40-41 33.20451029275543 38.0 32.0 40.0 16.0 41.0 42-43 33.23012721045002 38.0 32.0 40.0 15.5 41.0 44-45 33.08193024162528 38.0 32.0 40.0 15.0 41.0 46-47 32.831678712169186 37.5 31.5 40.0 13.0 41.0 48-49 32.56567780810232 37.0 31.0 40.0 9.0 41.0 50-51 32.29794628979333 37.0 31.0 40.0 8.5 41.0 52-53 32.02788231823153 37.0 31.0 40.0 7.5 41.0 54-55 31.731490670186986 36.0 30.0 39.5 6.5 41.0 56-57 31.397686550468126 36.0 30.0 39.0 2.0 41.0 58-59 31.05165152474605 35.0 29.0 39.0 2.0 40.0 60-61 30.70132267206054 35.0 29.0 39.0 2.0 40.0 62-63 30.364029030882193 35.0 28.5 38.5 2.0 40.0 64-65 29.945902686557012 34.5 28.0 38.0 2.0 40.0 66-67 29.49940077768067 34.0 28.0 37.5 2.0 40.0 68-69 29.048614036717414 34.0 27.0 37.0 2.0 39.0 70-71 28.61593561761766 34.0 26.0 36.0 2.0 39.0 72-73 28.179903254379035 33.5 26.0 36.0 2.0 39.0 74-75 27.73632762414892 33.0 26.0 35.0 2.0 38.0 76-77 26.305229359538625 31.5 24.0 34.0 2.0 36.0 78-79 27.14391622531806 33.0 25.5 35.0 2.0 37.0 80-81 27.18285864371654 33.0 26.0 35.0 2.0 36.0 82-83 26.8551095477834 33.0 25.0 35.0 2.0 36.0 84-85 26.547538085942612 33.0 25.0 35.0 2.0 35.5 86-87 26.020432107326215 32.0 23.5 35.0 2.0 35.0 88-89 25.667307156389175 32.0 21.5 35.0 2.0 35.0 90-91 25.30917287694747 32.0 20.0 34.5 2.0 35.0 92-93 25.005683944243543 32.0 19.0 34.0 2.0 35.0 94-95 24.629076641581317 32.0 16.5 34.0 2.0 35.0 96-97 24.105929062805828 31.0 4.5 34.0 2.0 35.0 98-99 23.495602650185 31.0 2.0 34.0 2.0 35.0 100-101 21.299005395617566 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 75519.0 3 33804.0 4 18204.0 5 13004.0 6 11079.0 7 11181.0 8 12336.0 9 13927.0 10 15856.0 11 17984.0 12 19619.0 13 21402.0 14 23075.0 15 24677.0 16 25906.0 17 26906.0 18 26283.0 19 25301.0 20 25811.0 21 26941.0 22 28921.0 23 32453.0 24 38149.0 25 44741.0 26 52897.0 27 62781.0 28 74634.0 29 87489.0 30 102969.0 31 122229.0 32 146035.0 33 178748.0 34 225757.0 35 293460.0 36 391158.0 37 449009.0 38 242074.0 39 14977.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.45846104739018 19.0307572262424 13.609727690089803 24.90105403627762 2 16.192936503367683 20.359886644930683 37.69831249574788 25.74886435595376 3 19.328560170862946 24.1026603941899 29.108134799586388 27.460644635360765 4 14.051520103112175 16.159791158588945 35.34467501836031 34.44401371993857 5 14.71977191448494 36.91169307896146 33.74153077803499 14.627004228518606 6 34.175718533915116 34.815193908710555 16.63804907948944 14.371038477884893 7 29.686183670073596 31.343342736118878 20.480636070273267 18.48983752353426 8 27.257856242961008 34.23827593468143 19.658512926199766 18.845354896157787 9 26.96637015787562 15.507768984527539 19.030793917928523 38.49506693966831 10-11 26.0519322447492 25.129013608911656 27.159012189389475 21.660041956949673 12-13 26.51321431623785 22.377807401615076 27.221992457382445 23.886985824764633 14-15 23.6970383245596 23.956992113463436 24.462737064364145 27.88323249761282 16-17 23.97297700227161 27.06579188750389 25.20392685095375 23.757304259270747 18-19 24.114493059613185 26.137671872979713 26.525518462689178 23.222316604717925 20-21 24.659301359195346 25.37983194927067 26.268642309781363 23.69222438175262 22-23 24.40742915215332 25.222211510494862 26.221833908465797 24.148525428886014 24-25 24.235285262066704 25.429351503444124 26.18497218601782 24.150391048471356 26-27 23.963613197032014 25.694550701992597 26.109905661844014 24.23193043913138 28-29 24.04097728763025 25.69255843661203 26.172936901940098 24.093527373817622 30-31 24.289719957919996 25.521595611535 25.934592778119576 24.254091652425434 32-33 24.04555907332964 25.587168625926687 25.806889089670847 24.560383211072825 34-35 24.384934068269068 25.625363036322526 25.930072272751737 24.059630622656673 36-37 24.563506233966056 25.35386114284116 25.828555014449872 24.254077608742914 38-39 24.33077963783657 25.419936492979385 25.881024946382208 24.368258922801832 40-41 24.452027758615923 25.314499334138052 26.041115769027613 24.192357138218416 42-43 24.383286546510977 25.21135033099162 25.865826090412654 24.539537032084752 44-45 24.178732383998167 25.2599929658681 26.001537693949828 24.559736956183905 46-47 24.404408423040564 25.26604611869591 25.828926906149892 24.50061855211363 48-49 24.17131219451879 25.335092974888962 25.740040601073844 24.753554229518407 50-51 24.11046311448931 25.471959356953995 25.923517861071378 24.494059667485317 52-53 24.351921619720418 25.204822682183135 25.93062598142583 24.512629716670613 54-55 23.91154795816492 25.264658699699964 26.017662668353747 24.80613067378137 56-57 23.958136049334982 25.367377559621886 25.91463723786374 24.759849153179392 58-59 23.802759129607654 25.194966237035505 26.005774572516778 24.996500060840063 60-61 23.76719435470798 25.242689224802895 26.07653087847733 24.913585542011795 62-63 23.696442088335758 25.37021371807428 26.02537832619893 24.90796586739103 64-65 23.52164393518244 25.245710523049027 25.982780759630806 25.24986478213773 66-67 23.462926154653108 25.277790639023586 25.942570710902224 25.31671249542108 68-69 23.67105341125346 25.082867339252097 25.920134381769543 25.325944867724903 70-71 23.40216501052865 24.921339782857725 26.01128781272497 25.665207393888657 72-73 23.419348969684116 24.95152089886111 25.864246736536785 25.76488339491799 74-75 23.388866901122814 25.069801609242585 25.84659719405551 25.694734295579085 76-77 23.32594581106502 24.807827691371422 26.117727528636074 25.748498968927485 78-79 23.229426703303393 24.894561383867924 25.999391788423555 25.876620124405125 80-81 23.238676484515658 24.93310435850928 25.963572851271433 25.864646305703637 82-83 23.11679415682467 24.864817034394864 26.01924521290377 25.9991435958767 84-85 22.949516520162085 24.791005662270386 26.042632718560398 26.21684509900713 86-87 23.006299951135205 24.881019142537625 25.96976941719713 26.142911489130043 88-89 22.812048202684966 24.736913563485107 25.92567175600785 26.525366477822075 90-91 22.6843272537951 24.758011421168927 25.93082526759397 26.626836057442006 92-93 22.726448378926065 24.60433480109116 26.02047573866722 26.648741081315556 94-95 22.387562476193995 24.459627225580252 26.165318702389012 26.987491595836737 96-97 22.521298396711977 24.283001679666224 26.215484658121685 26.980215265500114 98-99 22.362958080718045 24.32446842438387 26.12452304979908 27.188050445099005 100-101 22.450811036069997 24.080700942940442 26.21040456452912 27.258083456460437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 91.0 1 62.0 2 71.0 3 117.5 4 107.0 5 114.0 6 182.0 7 360.5 8 554.5 9 609.5 10 513.0 11 422.5 12 415.5 13 444.0 14 477.0 15 490.5 16 545.5 17 601.0 18 678.5 19 793.5 20 880.0 21 1005.5 22 1183.0 23 1429.5 24 1782.5 25 2240.5 26 2825.0 27 3683.0 28 4952.5 29 6838.5 30 9823.0 31 13958.0 32 19553.5 33 24684.0 34 29252.5 35 35508.0 36 43904.0 37 52271.5 38 59410.0 39 66747.5 40 73884.5 41 80579.0 42 87601.5 43 96225.0 44 105356.5 45 114747.0 46 123909.0 47 129874.0 48 134843.0 49 139938.5 50 142173.0 51 142241.0 52 140834.0 53 140655.0 54 139443.0 55 132844.0 56 122455.5 57 110502.0 58 100371.0 59 88210.5 60 72833.0 61 59929.0 62 49146.5 63 37679.0 64 27316.5 65 19960.5 66 14745.5 67 10992.0 68 8036.0 69 5867.0 70 4344.0 71 3065.5 72 2126.5 73 1609.0 74 1209.5 75 850.0 76 587.5 77 353.0 78 193.0 79 102.0 80 58.0 81 26.0 82 14.5 83 10.0 84 5.5 85 3.5 86 3.0 87 2.0 88 1.0 89 2.0 90 1.0 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19242494020860265 2 0.0 3 0.011219064166505303 4 0.014097424652372554 5 0.006443602451316458 6 0.10564891328808201 7 0.140647160104877 8 0.12327887126401893 9 0.14139945886822866 10-11 0.11289387746557743 12-13 0.11281210586086528 14-15 0.11395690832683521 16-17 0.06451779611787671 18-19 0.07689801707129437 20-21 0.035194498668104104 22-23 0.08152628989800137 24-25 0.05653688749797206 26-27 0.06402716648960388 28-29 0.03807285915397135 30-31 0.024122623390080648 32-33 0.02984663571993029 34-35 0.0200013345125889 36-37 0.02271615178903188 38-39 0.030778832013648665 40-41 0.023926371538771515 42-43 0.011300835771217441 44-45 0.02521836289322329 46-47 0.03156383941888519 48-49 0.0076538222010560965 50-51 0.014342739466508967 52-53 0.00655808269791345 54-55 0.011120938240850739 56-57 0.005069839492152543 58-59 0.0032708641884855115 60-61 0.021604057964946802 62-63 0.009093002443989723 64-65 0.0062964135628346095 66-67 0.03835088260999262 68-69 0.08880396271738163 70-71 0.02081905055971028 72-73 0.043829580125705855 74-75 0.08396308371842308 76-77 0.24724462400761982 78-79 0.07974366891527676 80-81 0.015781919709442593 82-83 0.010728434538232478 84-85 0.012919913544517771 86-87 0.2638279054432413 88-89 0.6241953674096326 90-91 0.2660357387704691 92-93 0.3536621903799959 94-95 0.001030322219372936 96-97 0.004611918505764571 98-99 0.0036306592492189177 100-101 0.005135256775922253 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3057296.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.30757546264096 #Duplication Level Percentage of deduplicated Percentage of total 1 72.13034715264972 36.28702882528415 2 12.846542410014747 12.925568034516688 3 5.533724321615142 8.351647616973162 4 2.9152634053886834 5.866393350402675 5 1.7752873480921658 4.465520111600919 6 1.1180543229546738 3.3747961334024525 7 0.7631434549149211 2.6874327862867053 8 0.5259254416953683 2.1166427076650023 9 0.41317374977025806 1.8707192636174634 >10 1.867740107740599 16.152906004096764 >50 0.08318485485818991 2.8148321711666098 >100 0.025459532369480852 2.067001363779187 >500 0.001501201592039082 0.5410973678204897 >1k 6.526963440512683E-4 0.47841426338773974 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.2708641884855116E-5 0.0 3 0.0 0.0 0.0 3.2708641884855116E-5 0.0 4 0.0 0.0 0.0 3.2708641884855116E-5 1.3083456753942046E-4 5 0.0 0.0 0.0 3.2708641884855116E-5 1.3083456753942046E-4 6 0.0 0.0 0.0 3.2708641884855116E-5 2.9437777696369604E-4 7 0.0 0.0 0.0 1.6354320942427557E-4 2.9437777696369604E-4 8 0.0 0.0 0.0 1.6354320942427557E-4 2.9437777696369604E-4 9 0.0 0.0 0.0 2.616691350788409E-4 3.2708641884855114E-4 10-11 0.0 0.0 0.0 3.107320979061236E-4 3.2708641884855114E-4 12-13 0.0 0.0 0.0 3.9250370261826136E-4 3.2708641884855114E-4 14-15 0.0 0.0 0.0 4.088580235606889E-4 3.7614938167583383E-4 16-17 0.0 0.0 0.0 5.724012329849645E-4 4.579209863879716E-4 18-19 0.0 0.0 0.0 8.340703680638055E-4 5.233382701576817E-4 20-21 0.0 0.0 0.0 8.831333308910881E-4 5.724012329849645E-4 22-23 0.0 0.0 0.0 0.0010139678984305085 7.195901214668125E-4 24-25 0.0 0.0 0.0 0.0017826209827246037 8.504246890062329E-4 26-27 0.0 0.0 0.0 0.0027965888811551124 8.831333308910881E-4 28-29 0.0 0.0 0.0 0.007408507386919683 8.994876518335156E-4 30-31 3.2708641884855116E-5 0.0 0.0 0.027409841899508583 9.158419727759432E-4 32-33 3.2708641884855116E-5 0.0 0.0 0.07120671338332958 9.812592565456534E-4 34-35 3.2708641884855116E-5 0.0 0.0 0.12947715890119896 0.0010139678984305085 36-37 3.2708641884855116E-5 0.0 0.0 0.22608213270811855 0.0010466765403153637 38-39 3.2708641884855116E-5 0.0 0.0 0.3861582260925995 0.0011120938240850738 40-41 3.2708641884855116E-5 3.2708641884855116E-5 0.0 0.5752305305080045 0.001144802465969929 42-43 3.2708641884855116E-5 3.2708641884855116E-5 0.0 0.7758980484715906 0.0011775111078547841 44-45 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.0252850885226683 0.0012102197497396393 46-47 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.3163920012978787 0.0012265740706820668 48-49 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.6274838942647358 0.0012756370335093494 50-51 3.2708641884855116E-5 3.2708641884855116E-5 0.0 1.969027532826393 0.0012756370335093494 52-53 3.2708641884855116E-5 3.2708641884855116E-5 0.0 2.304209340541446 0.0014882432057609076 54-55 3.2708641884855116E-5 3.2708641884855116E-5 0.0 2.678428912346073 0.0017172036989548936 56-57 3.2708641884855116E-5 3.2708641884855116E-5 0.0 3.123168316054448 0.0017662666617821762 58-59 3.2708641884855116E-5 3.2708641884855116E-5 0.0 3.5954320419089285 0.0017989753036670312 60-61 3.2708641884855116E-5 3.2708641884855116E-5 0.0 4.099684819526797 0.0018971012293215966 62-63 3.2708641884855116E-5 6.541728376971023E-5 0.0 4.612523615639441 0.0018971012293215966 64-65 3.2708641884855116E-5 6.541728376971023E-5 0.0 5.156975314133797 0.0018971012293215966 66-67 3.2708641884855116E-5 6.541728376971023E-5 0.0 5.7845069630156845 0.0018971012293215966 68-69 3.2708641884855116E-5 6.541728376971023E-5 0.0 6.474577535181416 0.0019298098712064518 70-71 3.2708641884855116E-5 6.541728376971023E-5 0.0 7.196048403556607 0.0020933530806307274 72-73 3.2708641884855116E-5 6.541728376971023E-5 0.0 7.939384999031824 0.002289604931939858 74-75 3.2708641884855116E-5 6.541728376971023E-5 0.0 8.693957012994488 0.002289604931939858 76-77 3.2708641884855116E-5 6.541728376971023E-5 0.0 9.519882929228967 0.002305959252882285 78-79 3.2708641884855116E-5 6.541728376971023E-5 0.0 10.423377389693375 0.002322313573824713 80-81 3.2708641884855116E-5 6.541728376971023E-5 0.0 11.362622395737933 0.002371376536651996 82-83 3.2708641884855116E-5 6.541728376971023E-5 0.0 12.317207754826487 0.0024858567832489885 84-85 3.2708641884855116E-5 6.541728376971023E-5 0.0 13.271760405273156 0.0024858567832489885 86-87 3.2708641884855116E-5 8.177160471213779E-5 0.0 14.249879632197864 0.0024858567832489885 88-89 3.2708641884855116E-5 9.812592565456534E-5 0.0 15.299107446580248 0.0024858567832489885 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2670 0.0 46.496315 1 GTATCAA 4955 0.0 44.445377 1 TCAACGC 6185 0.0 34.69232 4 ATCAACG 6430 0.0 33.37045 3 CAACGCA 6420 0.0 33.269638 5 TATCAAC 6850 0.0 31.668293 2 AACGCAG 6990 0.0 30.556664 6 GTACATG 10240 0.0 25.454811 1 ACGCAGA 8505 0.0 24.610914 7 TACATGG 10540 0.0 24.13922 2 TAAGGTG 1565 0.0 23.35323 5 CGCAGAG 8920 0.0 23.197947 8 ACATGGG 11050 0.0 22.425537 3 CATGGGG 7845 0.0 20.089993 4 GAGTACA 7840 0.0 19.960396 1 GCAGAGT 9960 0.0 19.91796 9 GTAAGGT 1465 0.0 18.794249 4 GGTAAGG 1375 0.0 18.643425 3 AGGTAAG 1330 0.0 18.558838 2 AGAGTAC 8120 0.0 18.14656 10-11 >>END_MODULE