##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920875_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4422198 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.581093610010225 31.0 29.0 33.0 22.0 34.0 2 28.613643260659067 31.0 28.0 34.0 18.0 34.0 3 28.68006023249072 31.0 28.0 34.0 20.0 34.0 4 32.1622555118518 35.0 32.0 37.0 22.0 37.0 5 32.12311185523579 35.0 32.0 37.0 22.0 37.0 6 32.25062242803239 35.0 32.0 37.0 23.0 37.0 7 32.08572999218941 35.0 32.0 37.0 22.0 37.0 8 32.03451858103142 35.0 32.0 37.0 22.0 37.0 9 33.29424462676705 37.0 33.0 39.0 22.0 39.0 10-11 33.10031436855609 37.0 32.0 39.0 19.0 39.0 12-13 32.92569034674612 37.0 32.0 39.0 18.0 39.0 14-15 33.675079903703995 38.0 32.0 40.0 17.0 41.0 16-17 33.56408261231179 38.0 32.0 40.0 17.0 41.0 18-19 33.45741371146204 38.0 32.0 40.0 17.5 41.0 20-21 33.365464074652465 38.0 32.0 40.0 17.5 41.0 22-23 33.146014945508995 38.0 32.0 40.0 16.0 41.0 24-25 32.951420650997534 38.0 32.0 40.0 14.0 41.0 26-27 32.981174972264924 38.0 32.0 40.0 10.5 41.0 28-29 32.819473031284446 38.0 31.5 40.0 10.0 41.0 30-31 32.57121051567569 37.5 31.0 40.0 9.5 41.0 32-33 32.32114855553731 37.0 30.5 40.0 8.5 41.0 34-35 31.99052269934544 37.0 30.0 40.0 7.5 41.0 36-37 31.681518557061445 37.0 30.0 40.0 2.0 41.0 38-39 31.48063519543901 37.0 30.0 40.0 2.0 41.0 40-41 31.280075767751693 37.0 30.0 40.0 2.0 41.0 42-43 31.044949253742143 36.0 29.5 40.0 2.0 41.0 44-45 30.75927321662214 36.0 29.0 39.0 2.0 40.5 46-47 30.503123559822512 36.0 28.0 39.0 2.0 40.0 48-49 30.199361946253877 35.5 28.0 39.0 2.0 40.0 50-51 29.052538805363305 34.0 25.5 38.0 2.0 39.5 52-53 29.499908529649737 34.5 27.5 38.5 2.0 39.5 54-55 30.150546176358453 35.0 28.0 39.0 2.0 40.0 56-57 30.1022671305084 35.0 28.0 39.0 2.0 40.5 58-59 29.856979379937307 35.0 28.0 39.0 2.0 40.0 60-61 29.531824671803477 35.0 27.5 39.0 2.0 40.0 62-63 29.143858664853994 34.5 26.5 38.5 2.0 40.0 64-65 28.730671715739547 34.0 26.0 38.0 2.0 40.0 66-67 28.35036502209987 34.0 26.0 37.5 2.0 40.0 68-69 27.912343251025845 34.0 25.0 37.0 2.0 39.5 70-71 27.59183634473174 34.0 25.0 36.5 2.0 39.0 72-73 27.1377177141322 33.0 24.0 36.0 2.0 39.0 74-75 26.706131995898872 33.0 23.0 35.5 2.0 38.5 76-77 26.296991790055536 33.0 22.0 35.0 2.0 37.5 78-79 25.837119572664996 32.0 20.0 35.0 2.0 37.0 80-81 25.40356639390638 32.0 19.0 35.0 2.0 36.0 82-83 24.93930167758205 32.0 17.5 35.0 2.0 36.0 84-85 24.541584750388836 31.5 11.5 34.5 2.0 35.5 86-87 24.089729926158892 31.0 6.0 34.0 2.0 35.0 88-89 23.559235249077496 31.0 2.0 34.0 2.0 35.0 90-91 23.05865352478564 31.0 2.0 34.0 2.0 35.0 92-93 22.524155521756377 30.0 2.0 34.0 2.0 35.0 94-95 21.88928684332995 30.0 2.0 34.0 2.0 35.0 96-97 21.250193908097287 29.0 2.0 34.0 2.0 35.0 98 20.854036160298566 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 223666.0 3 38355.0 4 28349.0 5 23150.0 6 21571.0 7 22061.0 8 25137.0 9 29192.0 10 31766.0 11 33821.0 12 35340.0 13 35213.0 14 33333.0 15 34908.0 16 38082.0 17 40294.0 18 41776.0 19 40822.0 20 42021.0 21 44899.0 22 49001.0 23 54391.0 24 62421.0 25 71737.0 26 82692.0 27 95871.0 28 111179.0 29 129404.0 30 150475.0 31 176782.0 32 209811.0 33 253922.0 34 314680.0 35 396046.0 36 499731.0 37 542274.0 38 324777.0 39 33248.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73508682360211 18.282342594835374 13.302297960014812 24.680272621547708 2 16.025245198160285 19.817114132669612 39.00685301772086 25.150787651449246 3 18.9775106719929 23.902730953596905 29.42018633975862 27.699572034651577 4 13.477983075821811 15.823416793226711 36.43988388516528 34.258716245786204 5 14.464006904876772 36.79133579102434 34.1052464442531 14.639410859845794 6 33.23955028468535 34.97763162329116 17.370861330087756 14.411956761935738 7 28.937101056401183 31.675457382199472 21.186623336177753 18.200818225221592 8 26.685399865211433 34.008354177314814 20.319557459280734 18.98668849819302 9 27.013828869715915 15.45227056771316 19.676957024538478 37.856943538032446 10-11 25.677694666769785 25.10163497880466 27.755575394860205 21.465094959565356 12-13 26.226857675588246 22.649256579241207 27.53912718518891 23.584758559981637 14-15 23.551536242843657 24.178758280824557 25.00370587004161 27.265999606290176 16-17 23.574463369722107 27.03285731488962 25.83019037534014 23.562488940048134 18-19 23.57475126796417 26.392498434308422 27.151054371828252 22.881695925899155 20-21 24.34550886007197 25.627198044673772 26.855557064294928 23.17173603095933 22-23 24.12121519413689 25.41222428405414 26.695559979012472 23.771000542796493 24-25 23.85608070374564 25.56586708736449 26.65824003852173 23.91981217036814 26-27 23.652042304940586 25.755623578766425 26.648523455919566 23.94381066037342 28-29 23.76332362929683 25.963413071001167 26.49511945377433 23.778143845927673 30-31 24.043619412077334 25.74287868843112 26.273822266597612 23.93967963289393 32-33 23.7384169586164 25.849728376202325 26.239355317989887 24.172499347191383 34-35 24.138344165403065 25.799431706338872 26.30798022034001 23.754243907918045 36-37 24.274127103865546 25.511518231597602 26.270065168500757 23.944289496036095 38-39 24.097783880301566 25.61692906546975 26.252214364452836 24.033072689775846 40-41 24.172174896288944 25.490616467243303 26.419800722068914 23.91740791439884 42-43 24.084366753651093 25.436329342815426 26.19947486829974 24.279829035233746 44-45 23.86027928747509 25.50908787261481 26.39844406093194 24.232188778978156 46-47 24.031120401905444 25.453197749698266 26.24182285657261 24.27385899182368 48-49 23.878759519484422 25.571203121158064 26.116563465840425 24.433473893517093 50-51 23.795258234396616 25.72123087799547 26.226451483349813 24.2570594042581 52-53 23.895053917815936 25.50765889683717 26.311065021682982 24.28622216366391 54-55 23.551286967489148 25.439734337488435 26.577848220889894 24.431130474132527 56-57 23.52859686258274 25.510180328421722 26.479902499766368 24.481320309229172 58-59 23.543267724791313 25.335499129355902 26.46194921414961 24.659283931703175 60-61 23.43770776332964 25.251473469598633 26.725675473892007 24.585143293179716 62-63 23.433070233238894 25.240749982857093 26.717128874240093 24.60905090966392 64-65 23.271976132867582 25.155058896597186 26.6597372988914 24.91322767164383 66-67 23.276029347275333 25.19622411720733 26.616213256261517 24.91153327925582 68-69 23.35483038809036 25.051829441030023 26.614723115141576 24.978617055738038 70-71 23.135872636335293 24.90693223613568 26.769206813305967 25.18798831422306 72-73 23.159266861424662 25.03934271899835 26.704559897161968 25.096830522415026 74-75 23.17599945903433 25.070355035950165 26.74372931384949 25.009916191166013 76-77 23.19658562038172 24.79356461418216 26.861622799229906 25.148226966206217 78-79 23.15526617041578 24.825875388156916 26.86751553478578 25.151342906641528 80-81 23.2327642894808 24.834285925670905 26.78985668165162 25.14309310319668 82-83 23.16944841141334 24.796999995688214 26.897406960175214 25.13614463272323 84-85 23.13597102114626 24.796622552903667 26.85922360336896 25.20818282258111 86-87 23.15588891178091 24.72402887661998 26.90561322428664 25.21446898731248 88-89 23.105256801752844 24.486855044552016 27.03481667524746 25.373071478447685 90-91 23.099440322155473 24.48818941420098 27.070723484693314 25.341646778950235 92-93 23.333870023236518 24.291617550463318 27.046550076742115 25.327962349558046 94-95 23.223907702059474 24.14331948458745 27.203679371934996 25.429093441418082 96-97 23.371201091891404 23.924125439512842 27.2013882852707 25.503285183325055 98 23.37313503287861 23.777264194446765 27.127828087158278 25.72177268551635 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 119.0 1 108.0 2 152.0 3 229.5 4 251.5 5 286.0 6 446.5 7 862.0 8 1294.5 9 1492.5 10 1473.5 11 1508.5 12 1722.0 13 1914.5 14 2184.0 15 2419.5 16 2511.0 17 2617.0 18 2753.0 19 2792.5 20 2810.5 21 2925.5 22 3154.0 23 3568.0 24 4128.5 25 5011.5 26 6442.5 27 8542.0 28 11844.0 29 16698.5 30 23653.5 31 33166.5 32 42643.5 33 51330.0 34 61457.5 35 73323.0 36 86107.5 37 97962.5 38 109204.0 39 119579.5 40 128272.5 41 137056.5 42 146992.5 43 157217.5 44 166794.5 45 176506.5 46 185648.5 47 192894.0 48 197526.5 49 198259.0 50 197486.0 51 196973.5 52 195303.0 53 193371.0 54 187858.5 55 177475.0 56 163342.0 57 146374.0 58 131974.5 59 115955.0 60 97557.0 61 80729.0 62 65583.5 63 50715.5 64 36818.0 65 27223.0 66 20179.0 67 15120.5 68 11148.0 69 8123.5 70 6147.0 71 4574.5 72 3471.5 73 2590.0 74 1997.0 75 1452.5 76 905.0 77 546.5 78 329.0 79 202.0 80 105.0 81 59.0 82 39.0 83 28.5 84 19.5 85 16.5 86 15.5 87 15.0 88 15.5 89 9.5 90 8.0 91 7.0 92 5.5 93 7.5 94 5.5 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38706995932791793 2 0.024422244322845788 3 0.018361909620509983 4 0.016123203890915785 5 0.02204785945812467 6 0.022635802377007994 7 0.015309129080154258 8 0.010356840648021639 9 0.0 10-11 0.0 12-13 0.005438471999670752 14-15 0.003606803675457318 16-17 0.006229933621244459 18-19 0.03680296540317733 20-21 0.07910093577899498 22-23 0.09805078831838829 24-25 0.06499030572579519 26-27 0.0742051803198319 28-29 0.057878457726225734 30-31 0.05271134399680883 32-33 0.02074760107982501 34-35 0.3424880568441304 36-37 0.5215392888332906 38-39 0.47724005121435087 40-41 0.486409699430012 42-43 0.4364910842978989 44-45 0.41087034094809866 46-47 0.40878992754281923 48-49 0.3997785716514729 50-51 0.3954707591111931 52-53 0.4551582719724444 54-55 0.4572839117560996 56-57 0.42798852516327857 58-59 0.4132447258128198 60-61 0.42740058224439526 62-63 0.4080323857050272 64-65 0.4559045072156425 66-67 0.4773191973765082 68-69 0.4199608430016023 70-71 0.37699578354474406 72-73 0.3628512337077625 74-75 0.3451677197628871 76-77 0.34348303716839457 78-79 0.3426576557630391 80-81 0.35928965641068084 82-83 0.35437128776232996 84-85 0.35445043392448733 86-87 0.3399666862496885 88-89 0.3846503480848212 90-91 0.36186755997809233 92-93 0.35178207760032454 94-95 0.3596062410593103 96-97 0.35952709489715295 98 0.35471048560014723 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4422198.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.08699199347324 #Duplication Level Percentage of deduplicated Percentage of total 1 74.54749394752402 38.829547203781786 2 12.020749164614774 12.5224933098568 3 5.046270032665383 7.885350803650374 4 2.59377537440598 5.404078286382093 5 1.5091009311073185 3.9302264057964957 6 0.962990120619115 3.0095555221489003 7 0.6396276600275794 2.3321396564662384 8 0.4746575147201085 1.9778785735094557 9 0.35143811598973385 1.6474818900382728 >10 1.7338001950167814 15.89123540764368 >50 0.08974839842097261 3.19069031638846 >100 0.028558249176236165 2.4379641377338586 >500 0.0012226412000604495 0.4418283650948697 >1k 5.676545118938389E-4 0.49953012150844595 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.5226378375640346E-5 2 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 4.5226378375640346E-5 3 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 4.5226378375640346E-5 4 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 6.783956756346053E-5 5 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 6.783956756346053E-5 6 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 6.783956756346053E-5 7 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 9.045275675128069E-5 8 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 9.045275675128069E-5 9 2.2613189187820173E-5 2.2613189187820173E-5 0.0 0.0 9.045275675128069E-5 10-11 2.2613189187820173E-5 6.783956756346053E-5 0.0 0.0 9.045275675128069E-5 12-13 2.2613189187820173E-5 1.2437254053301096E-4 0.0 0.0 2.0351870269038158E-4 14-15 2.2613189187820173E-5 2.0351870269038155E-4 0.0 0.0 2.60051675659932E-4 16-17 2.2613189187820173E-5 2.2613189187820174E-4 0.0 0.0 2.9397145944166225E-4 18-19 2.2613189187820173E-5 2.2613189187820174E-4 0.0 1.1306594593910087E-5 2.9397145944166225E-4 20-21 2.2613189187820173E-5 2.713582702538421E-4 0.0 6.783956756346052E-5 3.8442421619294296E-4 22-23 2.2613189187820173E-5 2.713582702538421E-4 0.0 2.0351870269038155E-4 3.957308107868531E-4 24-25 2.2613189187820173E-5 3.2789124322339257E-4 0.0 0.0010402067026397282 4.2965059456858334E-4 26-27 2.2613189187820173E-5 3.8442421619294296E-4 0.0 0.0020125738377159957 4.974901621320439E-4 28-29 2.2613189187820173E-5 4.2965059456858334E-4 0.0 0.0066143578374374 4.974901621320439E-4 30-31 2.2613189187820173E-5 4.409571891624934E-4 0.0 0.028571764538810787 5.20103351319864E-4 32-33 2.2613189187820173E-5 4.522637837564035E-4 0.0 0.0812718019410257 5.540231351015943E-4 34-35 2.2613189187820173E-5 4.522637837564035E-4 0.0 0.15104479718004488 5.879429188833245E-4 36-37 2.2613189187820173E-5 4.7487697294422367E-4 0.0 0.27285074074023824 5.879429188833245E-4 38-39 2.2613189187820173E-5 5.540231351015943E-4 0.0 0.46904277013376605 6.105561080711446E-4 40-41 2.2613189187820173E-5 5.653297296955044E-4 0.0 0.6937161113093534 6.331692972589649E-4 42-43 2.2613189187820173E-5 5.992495134772346E-4 0.0 0.9335855156191559 6.670890810406951E-4 44-45 2.2613189187820173E-5 6.331692972589649E-4 0.0 1.2286311015472395 7.236220540102456E-4 46-47 2.2613189187820173E-5 6.331692972589649E-4 0.0 1.5797573966611176 7.575418377919758E-4 48-49 2.2613189187820173E-5 6.897022702285153E-4 0.0 1.9515521466926629 8.593011891371667E-4 50-51 2.2613189187820173E-5 7.236220540102455E-4 0.0 2.352687509695405 8.819143783249868E-4 52-53 2.2613189187820173E-5 7.462352431980658E-4 0.0 2.758130685238427 9.384473512945373E-4 54-55 2.2613189187820173E-5 7.462352431980658E-4 0.0 3.213526395697343 9.949803242640877E-4 56-57 2.2613189187820173E-5 7.575418377919758E-4 0.0 3.739452643233071 0.001017593513451908 58-59 2.2613189187820173E-5 8.140748107615262E-4 0.0 4.2974783128209095 0.0010628198918275482 60-61 2.2613189187820173E-5 8.593011891371667E-4 0.0 4.897315769217027 0.0010967396756092784 62-63 2.2613189187820173E-5 8.593011891371667E-4 0.0 5.503145720747918 0.001153272648578829 64-65 2.2613189187820173E-5 9.271407567006272E-4 0.0 6.153071391195057 0.0011871924323605591 66-67 2.2613189187820173E-5 9.497539458884473E-4 0.0 6.890589249961218 0.0012098056215483794 68-69 2.2613189187820173E-5 9.723671350762675E-4 0.0 7.69895423045282 0.0012211122161422895 70-71 2.2613189187820173E-5 9.723671350762675E-4 0.0 8.552930013536255 0.0012324188107361994 72-73 2.2613189187820173E-5 9.723671350762675E-4 0.0 9.413124423646341 0.0013002583782996601 74-75 2.2613189187820173E-5 9.723671350762675E-4 0.0 10.297017456025262 0.0013680979458631204 76-77 2.2613189187820173E-5 9.723671350762675E-4 0.0 11.254007622453813 0.0014020177296448508 78-79 4.5226378375640346E-5 9.723671350762675E-4 0.0 12.299087467363513 0.0014811638918022214 80-81 4.5226378375640346E-5 9.836737296701776E-4 0.0 13.377476539946876 0.0015263902701778617 82-83 4.5226378375640346E-5 0.0010062869188579978 0.0 14.478037844528897 0.0016281496215230526 84-85 4.5226378375640346E-5 0.001017593513451908 0.0 15.576778787381297 0.0016281496215230526 86 4.5226378375640346E-5 0.001017593513451908 0.0 16.420409036411304 0.0016281496215230526 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4150 0.0 47.024097 1 GTATCAA 7515 0.0 43.30052 1 TCAACGC 9755 0.0 33.09469 4 ATCAACG 10015 0.0 32.143936 3 CAACGCA 10150 0.0 31.761585 5 TATCAAC 10300 0.0 31.345339 2 AACGCAG 10715 0.0 30.38364 6 GTACATG 13890 0.0 26.210598 1 ACGCAGA 12625 0.0 25.418613 7 CGCAGAG 12815 0.0 24.790491 8 TACATGG 14415 0.0 24.210709 2 ACATGGG 14825 0.0 22.735558 3 GCAGAGT 14240 0.0 20.956886 9 CATGGGG 11150 0.0 19.618076 4 GAGTACA 10650 0.0 18.79933 1 AGAGTAC 12245 0.0 18.757246 10-11 TAAGGCG 1315 0.0 18.4826 5 GTGGTAT 2300 0.0 18.010153 1 GTGTAAG 1740 0.0 17.987152 1 TAAGGTG 1895 0.0 17.665525 5 >>END_MODULE