##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920873_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3914014 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.629030453135833 31.0 30.0 33.0 22.0 34.0 2 28.660144547260177 31.0 28.0 34.0 18.0 34.0 3 28.74216367136142 31.0 28.0 34.0 22.0 34.0 4 32.21375626147479 35.0 32.0 37.0 22.0 37.0 5 32.179918109643964 35.0 32.0 37.0 22.0 37.0 6 32.302693347545514 35.0 32.0 37.0 23.0 37.0 7 32.13067556733318 35.0 32.0 37.0 22.0 37.0 8 32.069808130476794 35.0 32.0 37.0 22.0 37.0 9 33.333827370060504 37.0 33.0 39.0 22.0 39.0 10-11 33.13419752714221 37.0 32.0 39.0 19.0 39.0 12-13 32.9685578539065 37.0 32.0 39.0 18.0 39.0 14-15 33.74637431036271 38.0 32.0 40.0 17.5 41.0 16-17 33.634433474177655 38.0 32.0 40.0 17.0 41.0 18-19 33.506754446969275 38.0 32.0 40.0 17.5 41.0 20-21 33.40413894789339 38.0 32.0 40.0 17.5 41.0 22-23 33.18416260136014 38.0 32.0 40.0 16.0 41.0 24-25 32.99284736845601 38.0 32.0 40.0 14.5 41.0 26-27 33.03922954797811 38.0 32.0 40.0 12.0 41.0 28-29 32.87449495581774 38.0 31.5 40.0 10.0 41.0 30-31 32.62637384536693 38.0 31.0 40.0 9.5 41.0 32-33 32.39047177654449 37.0 31.0 40.0 9.0 41.0 34-35 32.0678852962713 37.0 30.0 40.0 7.5 41.0 36-37 31.76792354345181 37.0 30.0 40.0 4.5 41.0 38-39 31.56672740567612 37.0 30.0 40.0 2.0 41.0 40-41 31.366817798812164 37.0 30.0 40.0 2.0 41.0 42-43 31.13107477387664 36.5 30.0 40.0 2.0 41.0 44-45 30.846938973647003 36.0 29.0 39.0 2.0 41.0 46-47 30.60040319222159 36.0 28.5 39.0 2.0 40.0 48-49 30.300205492366658 35.5 28.0 39.0 2.0 40.0 50-51 29.145542274503875 34.0 26.0 38.0 2.0 39.5 52-53 29.588304998398065 34.5 27.5 38.5 2.0 39.5 54-55 30.236469261479392 35.5 28.0 39.0 2.0 40.0 56-57 30.17992347497991 35.0 28.0 39.0 2.0 41.0 58-59 29.927137588163966 35.0 28.0 39.0 2.0 40.0 60-61 29.59541611246153 35.0 28.0 39.0 2.0 40.0 62-63 29.188808854541655 34.5 26.5 38.5 2.0 40.0 64-65 28.755585825702205 34.0 26.0 38.0 2.0 40.0 66-67 28.364283827293413 34.0 26.0 37.5 2.0 40.0 68-69 27.915388141176805 34.0 25.5 37.0 2.0 39.5 70-71 27.575311304456243 34.0 25.0 36.0 2.0 39.0 72-73 27.111632329368263 33.0 24.0 36.0 2.0 39.0 74-75 26.665965425775177 33.0 23.0 35.0 2.0 38.0 76-77 26.247912245587266 33.0 21.5 35.0 2.0 37.0 78-79 25.795832232587824 32.0 20.0 35.0 2.0 37.0 80-81 25.349948160635094 32.0 18.5 35.0 2.0 36.0 82-83 24.88307221180098 32.0 17.0 35.0 2.0 36.0 84-85 24.483986771636484 31.0 10.0 34.5 2.0 35.0 86-87 24.03040855244769 31.0 4.5 34.0 2.0 35.0 88-89 23.500999868677017 31.0 2.0 34.0 2.0 35.0 90-91 23.0056761421906 31.0 2.0 34.0 2.0 35.0 92-93 22.47380962357314 30.0 2.0 34.0 2.0 35.0 94-95 21.8369308336659 30.0 2.0 34.0 2.0 35.0 96-97 21.192553859030653 29.0 2.0 34.0 2.0 35.0 98 20.791392161601873 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 196178.0 3 34279.0 4 24990.0 5 20738.0 6 19157.0 7 19503.0 8 22576.0 9 25615.0 10 28208.0 11 30027.0 12 31132.0 13 31156.0 14 29095.0 15 30236.0 16 32555.0 17 34734.0 18 36236.0 19 36003.0 20 37278.0 21 39725.0 22 43485.0 23 49080.0 24 55541.0 25 63733.0 26 73473.0 27 85517.0 28 98805.0 29 113385.0 30 132142.0 31 154861.0 32 183565.0 33 223444.0 34 277988.0 35 352859.0 36 448382.0 37 488500.0 38 283047.0 39 26784.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.99154255750189 17.27982697375372 12.551942237052522 25.17668823169187 2 16.21895266663225 19.099914186517317 38.88669400363596 25.794439143214476 3 19.88621408862156 22.956757367285118 28.364015767709926 28.793012776383392 4 13.583404775624357 14.96690230910854 35.507350996508166 35.942341918758935 5 14.873356584598968 36.40043729006908 33.69231563388661 15.033890491445348 6 34.77898210175916 33.97461157612771 16.77131456673214 14.475091755380998 7 30.27055577119293 30.835477427536684 20.15429812419333 18.739668677077052 8 27.343970777689368 34.045443186818076 19.43694518925974 19.17364084623282 9 27.226346150013768 15.562591242647574 18.87808781470889 38.33297479262976 10-11 26.28114674120909 24.84554854569977 26.983482170345376 21.889822542745772 12-13 26.714750988740153 22.146131438372596 26.987872970109244 24.151244602778004 14-15 23.83189646637399 23.62455838457701 24.37915147241337 28.16439367663563 16-17 24.132041612281068 26.784887768181097 25.024257137538957 24.05881348199887 18-19 24.236971820006676 25.889298615715145 26.403568542317018 23.470161021961164 20-21 24.88664673116748 25.182508766365387 26.17006640180603 23.760778100661103 22-23 24.585926977074497 24.93901458202964 26.11936596135242 24.355692479543446 24-25 24.316847933418423 25.23228071431265 26.065777557350362 24.385093794918568 26-27 24.088934262034005 25.356910835378066 26.09508520376113 24.459069698826802 28-29 24.283171484635023 25.503683135798504 25.976294286844908 24.236851092721565 30-31 24.341748655851962 25.395416035657004 25.804728236509217 24.458107071981814 32-33 24.13780855249759 25.40038325582441 25.74133477184166 24.72047341983634 34-35 24.470513809838543 25.405853008715006 25.779988688265593 24.343644493180854 36-37 24.675372861747697 25.073215309821666 25.81350165932449 24.43791016910615 38-39 24.448817093936807 25.32658519986905 25.71839119180194 24.506206514392208 40-41 24.474481315525797 25.23200700028479 25.97327175656402 24.32023992762539 42-43 24.511372080973892 25.081011990197872 25.785371494221437 24.6222444346068 44-45 24.31528976505716 25.133563991830083 25.920776526902735 24.63036971621002 46-47 24.442850486880225 25.257534367091615 25.747242418502438 24.55237272752572 48-49 24.246134094154872 25.30942570737463 25.66918650972008 24.775253688750418 50-51 24.162392871957987 25.47242769277918 25.833407599799706 24.531771835463125 52-53 24.342368033203034 25.228538359122233 25.880694951120653 24.548398656554085 54-55 24.05153089314407 25.11624230851791 26.069968766395142 24.76225803194288 56-57 23.944350651133092 25.30368381532207 26.02365900292223 24.72830653062261 58-59 23.9928343535496 25.086380334076207 25.965041566828518 24.95574374554568 60-61 23.857878568267672 24.962026128281266 26.30263655778814 24.877458745662924 62-63 23.894069518689832 25.035777359725113 26.239068812696946 24.83108430888811 64-65 23.804037244368374 24.91836595915026 26.109498032443195 25.168098764038167 66-67 23.72201507501253 25.02947436368805 26.100266093798226 25.1482444675012 68-69 23.941071116166274 24.80156867332286 26.104217553893644 25.153142656617224 70-71 23.658080823297357 24.745793351286657 26.150716904352713 25.44540892106328 72-73 23.626997389542687 24.668590881192145 26.143119822093052 25.56129190717212 74-75 23.622077722001617 24.860892120676453 26.16312438334843 25.3539057739735 76-77 23.585063327674415 24.617651363664212 26.33333393143729 25.46395137722408 78-79 23.529035566343527 24.602919801392297 26.277392282516015 25.590652349748165 80-81 23.482021813990407 24.548917401764232 26.3312897244948 25.637771059750563 82-83 23.46488344042689 24.440979338827084 26.401477134789193 25.692660085956838 84-85 23.356299350114405 24.530005472005673 26.337843860567293 25.775851317312625 86-87 23.364401418595328 24.431718565287067 26.439011474053427 25.76486854206418 88-89 23.34228923656855 24.14823077638129 26.43244126895597 26.077038718094194 90-91 23.165805988066936 24.19158276198674 26.49229619479004 26.150315055156288 92-93 23.359905806448968 24.02099615883908 26.568982471755266 26.050115562956687 94-95 23.174766559397327 23.883167216472774 26.712321831094695 26.229744393035205 96-97 23.381173926502854 23.567759290011672 26.659761794736873 26.391304988748605 98 23.29948200130128 23.54861153481533 26.605639587139194 26.546266876744202 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 58.0 1 59.0 2 106.5 3 164.0 4 152.0 5 170.0 6 292.5 7 543.5 8 863.0 9 1037.5 10 1048.0 11 1104.0 12 1270.0 13 1452.5 14 1643.0 15 1821.5 16 1973.5 17 2066.0 18 2065.5 19 2098.5 20 2144.0 21 2196.0 22 2334.5 23 2588.5 24 2986.5 25 3510.0 26 4374.5 27 5727.0 28 7350.0 29 9912.5 30 14189.5 31 20302.0 32 26837.5 33 33695.5 34 41608.5 35 50709.5 36 61194.0 37 72410.0 38 83640.0 39 94771.0 40 104614.5 41 114279.0 42 125311.5 43 135554.5 44 146390.0 45 158054.0 46 167798.5 47 174859.0 48 179319.0 49 181327.0 50 181753.0 51 181826.5 52 180657.5 53 179306.0 54 175087.5 55 167154.5 56 156140.5 57 142753.0 58 131266.0 59 116441.0 60 97658.0 61 80585.5 62 65574.0 63 50530.0 64 37008.0 65 27338.0 66 20337.0 67 15099.0 68 10904.0 69 7835.5 70 5690.5 71 4126.5 72 3153.5 73 2385.0 74 1826.5 75 1307.5 76 825.5 77 490.5 78 270.0 79 155.5 80 92.0 81 57.0 82 42.0 83 29.5 84 20.5 85 18.0 86 15.5 87 9.0 88 7.5 89 9.5 90 6.0 91 5.5 92 6.5 93 4.5 94 3.5 95 3.5 96 2.5 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3702081801444757 2 0.02238111565262669 3 0.017884453147076124 4 0.015303982050140854 5 0.021001457838423675 6 0.022789903153131286 7 0.014077619548627063 8 0.007460371884208897 9 0.0 10-11 2.5549218781537316E-5 12-13 0.004982097662399776 14-15 0.0029764839880490977 16-17 0.0055569550849843665 18-19 0.03525792191852149 20-21 0.074105509075849 22-23 0.09333129620895582 24-25 0.06186743327949261 26-27 0.07008150711775686 28-29 0.05441983600467449 30-31 0.05016589107754852 32-33 0.017910002365857658 34-35 0.32589306016789926 36-37 0.49840138538083917 38-39 0.4554275993902935 40-41 0.4642931783074869 42-43 0.41615845012307057 44-45 0.3914395809519332 46-47 0.3899449516532133 48-49 0.38056838836038914 50-51 0.3772725391375708 52-53 0.43486047827115587 54-55 0.436623374367082 56-57 0.4078421794096802 58-59 0.3937773344704439 60-61 0.4072289981589233 62-63 0.3896128118090533 64-65 0.4355886310064297 66-67 0.4555808947029827 68-69 0.40081614424475737 70-71 0.3598990703661254 72-73 0.3461408160522676 74-75 0.32971266837573904 76-77 0.32695335274733306 78-79 0.32589306016789926 80-81 0.34230843323503696 82-83 0.3377351230731418 84-85 0.3385399234647602 86-87 0.32421958633770853 88-89 0.36666961334323284 90-91 0.3450805234728338 92-93 0.3349502582259542 94-95 0.3422701094068647 96-97 0.3420146172190493 98 0.33806726291730177 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3914014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.283016086135056 #Duplication Level Percentage of deduplicated Percentage of total 1 72.57937893781465 35.04351320776197 2 12.115911730925996 11.699855220049846 3 5.3233915527710485 7.710881999257199 4 2.8815666315015434 5.565229120882361 5 1.7521137714730857 4.229866870638689 6 1.1768548707574176 3.4093261593496065 7 0.810524509984461 2.7394197567650527 8 0.5941762509241197 2.2950897185094954 9 0.4255831038265994 1.8493592263242284 >10 2.2029488217803435 18.380586695141297 >50 0.10045309846390253 3.2739983060408746 >100 0.03475179103626252 2.7885234004368273 >500 0.001758696600864074 0.5670017773997234 >1k 5.862321396514139E-4 0.4473485414428535 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.5549218781537316E-5 0.0 5 0.0 0.0 0.0 2.5549218781537316E-5 0.0 6 0.0 0.0 0.0 2.5549218781537316E-5 0.0 7 0.0 0.0 0.0 2.5549218781537316E-5 0.0 8 0.0 0.0 0.0 2.5549218781537316E-5 0.0 9 0.0 0.0 0.0 2.5549218781537316E-5 0.0 10-11 0.0 0.0 0.0 5.109843756307463E-5 0.0 12-13 0.0 0.0 0.0 5.109843756307463E-5 0.0 14-15 0.0 0.0 0.0 5.109843756307463E-5 1.2774609390768658E-5 16-17 0.0 0.0 0.0 6.387304695384328E-5 5.109843756307463E-5 18-19 0.0 0.0 1.2774609390768658E-5 1.0219687512614926E-4 5.109843756307463E-5 20-21 0.0 0.0 2.5549218781537316E-5 1.2774609390768657E-4 7.664765634461195E-5 22-23 0.0 0.0 2.5549218781537316E-5 3.065906253784478E-4 1.0219687512614926E-4 24-25 0.0 0.0 2.5549218781537316E-5 7.281527352738135E-4 1.0219687512614926E-4 26-27 0.0 0.0 2.5549218781537316E-5 0.001571276955064545 1.0219687512614926E-4 28-29 0.0 0.0 2.5549218781537316E-5 0.007268752743347366 1.0219687512614926E-4 30-31 0.0 0.0 2.5549218781537316E-5 0.030020332068306347 1.1497148451691793E-4 32-33 0.0 0.0 2.5549218781537316E-5 0.07443764892000898 1.277460939076866E-4 34-35 0.0 0.0 2.5549218781537316E-5 0.13447831305662167 1.277460939076866E-4 36-37 0.0 0.0 2.5549218781537316E-5 0.2322934971617373 1.277460939076866E-4 38-39 0.0 0.0 2.5549218781537316E-5 0.39527196376916385 1.277460939076866E-4 40-41 0.0 0.0 2.5549218781537316E-5 0.5795968026685647 1.277460939076866E-4 42-43 0.0 0.0 2.5549218781537316E-5 0.7741668782993623 1.277460939076866E-4 44-45 0.0 0.0 2.5549218781537316E-5 1.0053106606159303 1.277460939076866E-4 46-47 0.0 0.0 2.5549218781537316E-5 1.2863265179940595 1.277460939076866E-4 48-49 0.0 0.0 2.5549218781537316E-5 1.5836811007829814 1.277460939076866E-4 50-51 0.0 0.0 2.5549218781537316E-5 1.9091270496222037 1.277460939076866E-4 52-53 0.0 0.0 2.5549218781537316E-5 2.2330911437720973 1.7884453147076122E-4 54-55 0.0 0.0 2.5549218781537316E-5 2.5932584809354284 1.7884453147076122E-4 56-57 0.0 0.0 2.5549218781537316E-5 3.019253380289391 1.7884453147076122E-4 58-59 0.0 0.0 2.5549218781537316E-5 3.47344184256878 1.7884453147076122E-4 60-61 0.0 0.0 2.5549218781537316E-5 3.961316949811626 1.7884453147076122E-4 62-63 0.0 0.0 2.5549218781537316E-5 4.45348432580977 2.2994296903383586E-4 64-65 0.0 0.0 2.5549218781537316E-5 4.983873333105094 2.554921878153732E-4 66-67 0.0 0.0 2.5549218781537316E-5 5.5858257022075035 2.554921878153732E-4 68-69 0.0 0.0 2.5549218781537316E-5 6.24505941981812 2.554921878153732E-4 70-71 2.5549218781537316E-5 0.0 2.5549218781537316E-5 6.937698740985597 2.554921878153732E-4 72-73 5.109843756307463E-5 0.0 2.5549218781537316E-5 7.645859212562858 2.554921878153732E-4 74-75 5.109843756307463E-5 0.0 2.5549218781537316E-5 8.368135627516917 2.554921878153732E-4 76-77 5.109843756307463E-5 0.0 2.5549218781537316E-5 9.142430251910188 2.554921878153732E-4 78-79 5.109843756307463E-5 0.0 2.5549218781537316E-5 9.991980100224476 2.554921878153732E-4 80-81 5.109843756307463E-5 2.5549218781537316E-5 2.5549218781537316E-5 10.872431728655034 2.554921878153732E-4 82-83 5.109843756307463E-5 5.109843756307463E-5 2.5549218781537316E-5 11.777487254772211 2.554921878153732E-4 84-85 5.109843756307463E-5 5.109843756307463E-5 2.5549218781537316E-5 12.691114543790594 2.554921878153732E-4 86 5.109843756307463E-5 5.109843756307463E-5 2.5549218781537316E-5 13.3911886876235 2.554921878153732E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6335 0.0 42.507187 1 GGTATCA 3345 0.0 41.283665 1 TCAACGC 7750 0.0 33.975613 4 CAACGCA 7845 0.0 33.50571 5 ATCAACG 8040 0.0 32.921295 3 TATCAAC 8155 0.0 32.29035 2 AACGCAG 8330 0.0 31.605524 6 GTACATG 12675 0.0 27.20113 1 ACGCAGA 10070 0.0 25.682674 7 TACATGG 13190 0.0 25.146547 2 ACATGGG 13235 0.0 24.435562 3 CGCAGAG 10570 0.0 23.988434 8 CATGGGG 9310 0.0 22.222042 4 GCAGAGT 11930 0.0 20.524078 9 GAGTACA 9655 0.0 17.78319 1 TATAGCG 210 2.6417038E-5 17.475428 5 AGAGTAC 10085 0.0 17.368355 10-11 AGTACAT 9450 0.0 16.651264 2 CAGAGTA 11025 0.0 16.490574 10-11 TAATACT 2285 0.0 16.462082 4 >>END_MODULE