##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920872_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4419357 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.377001224386262 31.0 28.0 33.0 16.0 34.0 2 28.410946207785432 31.0 28.0 33.0 16.0 34.0 3 28.481434968933264 31.0 28.0 34.0 16.0 34.0 4 31.930147756789054 35.0 32.0 37.0 20.0 37.0 5 31.88844576258492 35.0 32.0 37.0 20.0 37.0 6 32.004193596489266 35.0 32.0 37.0 22.0 37.0 7 31.835290744784817 35.0 32.0 37.0 19.0 37.0 8 31.76899829545339 35.0 32.0 37.0 18.0 37.0 9 33.012948716295156 37.0 32.0 39.0 18.0 39.0 10-11 32.812123007939846 37.0 32.0 39.0 17.0 39.0 12-13 32.63410287967231 37.0 32.0 39.0 17.0 39.0 14-15 33.37906374162576 38.0 32.0 40.0 17.0 41.0 16-17 33.26466508589372 38.0 32.0 40.0 16.5 41.0 18-19 33.14279339732002 38.0 32.0 40.0 14.5 41.0 20-21 33.04452265340863 38.0 32.0 40.0 11.0 41.0 22-23 32.819198697910124 38.0 32.0 40.0 10.0 41.0 24-25 32.62407472399265 38.0 31.0 40.0 10.0 41.0 26-27 32.664725547178016 38.0 31.0 40.0 10.0 41.0 28-29 32.499770441718105 38.0 31.0 40.0 9.0 41.0 30-31 32.25583076904627 37.5 30.5 40.0 8.0 41.0 32-33 32.01343294963498 37.0 30.0 40.0 7.5 41.0 34-35 31.686008620711114 37.0 30.0 40.0 2.0 41.0 36-37 31.38332872859106 37.0 30.0 40.0 2.0 41.0 38-39 31.179214193377 37.0 30.0 40.0 2.0 41.0 40-41 30.984873704477824 36.5 29.5 40.0 2.0 41.0 42-43 30.75907501928448 36.0 29.0 39.5 2.0 41.0 44-45 30.48010513746683 36.0 28.0 39.0 2.0 40.5 46-47 30.24045477656591 36.0 28.0 39.0 2.0 40.0 48-49 29.94060923342468 35.0 27.0 39.0 2.0 40.0 50-51 28.826781927778182 34.0 25.5 38.0 2.0 39.5 52-53 29.279271735684624 34.5 26.5 38.5 2.0 39.5 54-55 29.918048824749846 35.0 28.0 39.0 2.0 40.0 56-57 29.86774037490069 35.0 28.0 39.0 2.0 41.0 58-59 29.62480005575472 35.0 27.5 39.0 2.0 40.0 60-61 29.30089942948714 35.0 26.5 39.0 2.0 40.0 62-63 28.910182182611635 34.5 26.0 38.5 2.0 40.0 64-65 28.487877648264217 34.0 26.0 38.0 2.0 40.0 66-67 28.09588747865357 34.0 25.5 38.0 2.0 40.0 68-69 27.64559391784823 34.0 24.0 37.0 2.0 39.5 70-71 27.310259501551926 33.5 23.5 36.5 2.0 39.0 72-73 26.84465240079043 33.0 22.5 36.0 2.0 39.0 74-75 26.395684372183553 33.0 21.5 35.5 2.0 38.5 76-77 25.965392816194754 32.5 20.0 35.0 2.0 37.5 78-79 25.495248403783627 32.0 18.5 35.0 2.0 37.0 80-81 25.042310114344687 32.0 16.5 35.0 2.0 36.0 82-83 24.561339013797706 31.5 9.5 35.0 2.0 36.0 84-85 24.152223049642743 31.0 6.0 34.0 2.0 35.5 86-87 23.69198878931935 31.0 2.0 34.0 2.0 35.0 88-89 23.149858339120374 31.0 2.0 34.0 2.0 35.0 90-91 22.641163974759223 30.0 2.0 34.0 2.0 35.0 92-93 22.094653815023314 30.0 2.0 34.0 2.0 35.0 94-95 21.452173585433357 29.5 2.0 34.0 2.0 35.0 96-97 20.808016301919032 29.0 2.0 34.0 2.0 35.0 98 20.408988683195314 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 248409.0 3 41924.0 4 30503.0 5 24377.0 6 22758.0 7 23021.0 8 26228.0 9 29949.0 10 32831.0 11 34951.0 12 36413.0 13 35728.0 14 33487.0 15 35455.0 16 37731.0 17 40278.0 18 41799.0 19 42209.0 20 43196.0 21 46062.0 22 49760.0 23 55826.0 24 63572.0 25 73060.0 26 84172.0 27 96111.0 28 110243.0 29 127674.0 30 148695.0 31 173768.0 32 205666.0 33 247225.0 34 306171.0 35 384769.0 36 488312.0 37 538447.0 38 326303.0 39 32274.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.207504720599985 17.829741347005093 13.079593608237214 24.883160324157707 2 15.889397554857501 19.158814307096083 39.61359895217878 25.338189185867634 3 19.670894939538393 23.163322046924932 28.65446412870715 28.511318884829524 4 13.342586492635455 15.33121610547606 36.34513635434727 34.98106104754122 5 14.636683416403033 36.54739363630726 34.12123181855423 14.694691128735476 6 33.99124966078912 34.619833724996 17.12309343117997 14.265823183034906 7 29.793842780084255 31.061247444109885 20.55531981582881 18.58958995997705 8 26.81692906124738 34.47826546436837 19.69282058465515 19.011984889729103 9 26.71001686444431 16.035590697922796 19.296856986208628 37.95753545142427 10-11 25.77176986234417 25.212412218525103 27.470897902521973 21.54492001660876 12-13 26.389758059488493 22.406298443571444 27.36702198976788 23.83692150717218 14-15 23.458755436741683 24.099284559755453 24.80144196837599 27.640518035126878 16-17 23.710329605377346 27.072572832725335 25.575740761819116 23.641356800078206 18-19 23.670607297310177 26.381460727376894 26.900284837730094 23.04764713758284 20-21 24.35966458979913 25.63660467993222 26.694807355618757 23.308923374649897 22-23 24.0593989552671 25.427367825501722 26.53242648032233 23.980806738908843 24-25 23.840169378182505 25.60652923821592 26.60384042070128 23.949460962900297 26-27 23.713992217997514 25.845613738731725 26.461152088252938 23.97924195501782 28-29 23.815478157335377 25.979600585518416 26.403027163259274 23.801894093886933 30-31 23.97408970125052 25.79659453325523 26.259618024014287 23.96969774147997 32-33 23.744133969604768 25.821917552448433 26.16588750913902 24.268060968807788 34-35 24.07258308473456 25.820960528671144 26.213311651199454 23.893144735394838 36-37 24.27551582209178 25.53076307489526 26.169711830052115 24.024009272960846 38-39 23.945534872429473 25.73559563675246 26.224231080819365 24.0946384099987 40-41 24.1666451650376 25.58669610287046 26.32459791290601 23.922060819185926 42-43 24.075449610393328 25.476661205000617 26.184481309491055 24.263407875115004 44-45 23.991830718085605 25.613590602940572 26.27587670931184 24.11870196966198 46-47 24.07023440507235 25.58806281801972 26.14662013025697 24.195082646650967 48-49 23.901046047390924 25.62151723548934 26.136432036447776 24.34100468067196 50-51 23.847941117249118 25.756740357172745 26.228892146222034 24.166426379356103 52-53 23.991847968128212 25.594516525648103 26.297041223782024 24.116594282441657 54-55 23.685062780448426 25.47883046188083 26.517080536424658 24.31902622124608 56-57 23.657674681526363 25.649997256520763 26.413956822976065 24.27837123897681 58-59 23.643158762294544 25.415645150151565 26.46805326364304 24.473142823910845 60-61 23.568089816262816 25.403916669942184 26.64106234895229 24.386931164842714 62-63 23.49393211381966 25.469538811573873 26.63568513140726 24.400843943199206 64-65 23.412484582733253 25.340702561465093 26.54316414244316 24.703648713358493 66-67 23.417097203922076 25.418517218213143 26.444407645255108 24.719977932609673 68-69 23.597566752217162 25.21687697608804 26.496510771206232 24.689045500488564 70-71 23.33520308577281 25.05792636884614 26.589719162426604 25.017151382954445 72-73 23.316633131159048 25.016652329447165 26.604989942753683 25.061724596640104 74-75 23.285293833196587 25.152663766482668 26.58899040995937 24.973051990361377 76-77 23.25287322268493 24.93502905374719 26.698617786039875 25.113479937528 78-79 23.192576715480147 24.979258877024694 26.653486636973195 25.174677770521964 80-81 23.194343136648307 24.951810285959507 26.650572208507434 25.203274368884752 82-83 23.19226874046327 24.852989207156057 26.753392978106778 25.2013490742739 84-85 23.113060877851392 24.806571335515166 26.751920777431394 25.328447009202044 86-87 23.094267954194123 24.738179885245803 26.849256199885563 25.318295960674515 88-89 23.043744225048492 24.5844731830471 26.77162198054563 25.60016061135878 90-91 22.971002119414738 24.558065469797548 26.81983793993069 25.65109447085703 92-93 23.068069420871783 24.325855304958502 26.953925002818124 25.652150271351594 94-95 22.87797952266786 24.232962860114704 27.052427610362596 25.83663000685484 96-97 23.074062162004758 24.0238859148871 26.99478711784506 25.907264805263086 98 22.98248673154677 23.929237640631072 26.924516032941366 26.16375959488079 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 42.5 2 63.5 3 117.0 4 147.0 5 175.0 6 267.5 7 514.5 8 805.5 9 1005.5 10 1114.0 11 1242.5 12 1438.5 13 1620.5 14 1820.5 15 2073.5 16 2206.5 17 2235.0 18 2235.0 19 2207.5 20 2224.5 21 2310.5 22 2503.5 23 2850.5 24 3294.5 25 4038.0 26 5360.5 27 7273.0 28 9782.0 29 13194.5 30 18377.5 31 26111.0 32 35190.0 33 44631.5 34 55817.0 35 69098.5 36 83449.0 37 97424.5 38 110317.5 39 122334.5 40 133525.0 41 143459.0 42 154393.5 43 165877.5 44 177097.0 45 188108.5 46 196048.0 47 201218.5 48 203997.0 49 202568.0 50 200461.0 51 199116.5 52 195377.0 53 191892.5 54 185367.5 55 173978.0 56 159512.5 57 143949.5 58 130847.5 59 114639.0 60 95558.0 61 78524.5 62 63270.5 63 48254.5 64 35255.0 65 26385.5 66 19812.5 67 14623.0 68 10719.5 69 8085.0 70 5972.5 71 4308.5 72 3168.0 73 2345.0 74 1774.0 75 1286.0 76 827.5 77 501.5 78 289.5 79 151.5 80 92.0 81 58.5 82 43.0 83 30.0 84 20.0 85 15.0 86 11.5 87 9.0 88 11.0 89 11.0 90 7.5 91 4.0 92 4.0 93 5.5 94 4.5 95 3.5 96 1.5 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3691713523030613 2 0.023668601563530622 3 0.017378093691005275 4 0.015522620145871899 5 0.022152543910799693 6 0.022944514326405402 7 0.014527000194824722 8 0.008508025036221332 9 0.0 10-11 4.525545232032624E-5 12-13 0.0052835740583980885 14-15 0.0027153271392195743 16-17 0.005068610659876538 18-19 0.03571786574381749 20-21 0.07538426970258343 22-23 0.09416528241551882 24-25 0.061807634006485555 26-27 0.07108500173215244 28-29 0.05467990026603417 30-31 0.04965654505847797 32-33 0.0181587502435309 34-35 0.32813597091160546 36-37 0.4990771281885577 38-39 0.454025325403673 40-41 0.46308772973081824 42-43 0.4158976068237981 44-45 0.39047535648285486 46-47 0.3894797365318077 48-49 0.3797837558721778 50-51 0.3765593048943545 52-53 0.4350632908814563 54-55 0.4358326335709018 56-57 0.407559289733778 58-59 0.39383557381763906 60-61 0.4076611145014988 62-63 0.3884049195392 64-65 0.4357647503924213 66-67 0.45494174831315953 68-69 0.39978666579776195 70-71 0.36027865592211716 72-73 0.34662282318445875 74-75 0.32988961968901814 76-77 0.32818122636392577 78-79 0.32720823413903877 80-81 0.3427987374633912 82-83 0.33949508944400736 84-85 0.3384089585883195 86-87 0.3253075051415851 88-89 0.3661505508606795 90-91 0.3464531152382575 92-93 0.3356031205444593 94-95 0.3432626058496745 96-97 0.34329654743891475 98 0.33771881294043454 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4419357.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.794292580445145 #Duplication Level Percentage of deduplicated Percentage of total 1 74.80822605866065 40.99063826082333 2 12.302079689631586 13.481675077232499 3 5.029387562924777 8.267452008700566 4 2.551335709178691 5.5919454127869885 5 1.4783410991858286 4.050232736124258 6 0.9329816678112618 3.0673242286945177 7 0.6208918903565502 2.381493233071574 8 0.42302504640842153 1.8543486529407547 9 0.30194207977348425 1.4890232395310763 >10 1.4646699367823244 13.7249255508644 >50 0.06516000283463659 2.4338692925013743 >100 0.020506371498138543 1.863036100448792 >500 9.132420622419486E-4 0.3542408941279448 >1k 5.396428914456463E-4 0.4497953121520492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.051090464065248E-5 2 0.0 0.0 0.0 2.262772616016312E-5 9.051090464065248E-5 3 0.0 0.0 0.0 2.262772616016312E-5 9.051090464065248E-5 4 0.0 0.0 0.0 2.262772616016312E-5 9.051090464065248E-5 5 0.0 0.0 0.0 4.525545232032624E-5 1.8102180928130496E-4 6 0.0 0.0 0.0 4.525545232032624E-5 2.262772616016312E-4 7 0.0 0.0 0.0 4.525545232032624E-5 2.262772616016312E-4 8 0.0 0.0 0.0 4.525545232032624E-5 2.262772616016312E-4 9 0.0 0.0 0.0 4.525545232032624E-5 2.262772616016312E-4 10-11 0.0 0.0 0.0 6.788317848048935E-5 2.4890498776179433E-4 12-13 0.0 0.0 0.0 6.788317848048935E-5 5.65693154004078E-4 14-15 0.0 1.131386308008156E-5 0.0 6.788317848048935E-5 7.127733740451383E-4 16-17 0.0 2.262772616016312E-5 0.0 6.788317848048935E-5 9.390506356467695E-4 18-19 0.0 2.262772616016312E-5 0.0 9.051090464065248E-5 9.956199510471773E-4 20-21 0.0 2.262772616016312E-5 0.0 1.4708022004106025E-4 0.0012332110757288899 22-23 0.0 2.262772616016312E-5 0.0 2.9416044008212056E-4 0.0013124081172894608 24-25 0.0 4.525545232032624E-5 0.0 7.240872371252198E-4 0.0013124081172894608 26-27 0.0 4.525545232032624E-5 0.0 0.001493429926570766 0.0013802912957699503 28-29 0.0 4.525545232032624E-5 0.0 0.005487223593839557 0.0014255467480902765 30-31 0.0 4.525545232032624E-5 0.0 0.021496339852154964 0.0014255467480902765 32-33 0.0 4.525545232032624E-5 0.0 0.05831165031474035 0.001516057652730929 34-35 0.0 4.525545232032624E-5 0.0 0.10984629664451187 0.0016291962835317446 36-37 0.0 4.525545232032624E-5 0.0 0.19397618250799833 0.0016291962835317446 38-39 0.0 4.525545232032624E-5 0.0 0.3334195449700036 0.0016631378727719893 40-41 0.0 4.525545232032624E-5 0.0 0.49509464838436906 0.0016744517358520709 42-43 0.0 4.525545232032624E-5 0.0 0.6655266818227177 0.0017310210512524785 44-45 0.0 4.525545232032624E-5 0.0 0.876009790564555 0.0018894151343736205 46-47 0.0 4.525545232032624E-5 0.0 1.1222673343656102 0.002059123080574844 48-49 0.0 4.525545232032624E-5 0.0 1.3841945785325782 0.0022514587529362303 50-51 0.0 4.525545232032624E-5 0.0 1.6751531953630359 0.0023759112468171276 52-53 0.0 4.525545232032624E-5 0.0 1.9744840708727538 0.002443794425297617 54-55 0.0 4.525545232032624E-5 0.0 2.3076547108549956 0.002511677603778106 56-57 0.0 4.525545232032624E-5 0.0 2.6948603609077066 0.002568246919178514 58-59 0.0 4.525545232032624E-5 0.0 3.110757967731505 0.0026021885084187586 60-61 0.0 4.525545232032624E-5 0.0 3.558877456607375 0.0026021885084187586 62-63 0.0 4.525545232032624E-5 0.0 4.016025408221151 0.002749268728459819 64-65 0.0 4.525545232032624E-5 0.0 4.499783565799278 0.002805838043860227 66-67 0.0 4.525545232032624E-5 0.0 5.055599717334445 0.002805838043860227 68-69 0.0 5.65693154004078E-5 0.0 5.660393582143285 0.0028171519069403084 70-71 0.0 6.788317848048935E-5 0.0 6.306381222426701 0.002885035085420798 72-73 0.0 6.788317848048935E-5 0.0 6.970459729775168 0.003009487579301695 74-75 0.0 6.788317848048935E-5 0.0 7.646802464702445 0.0031113123470224288 76-77 0.0 6.788317848048935E-5 1.131386308008156E-5 8.377960866252714 0.0031452539362626735 78-79 0.0 6.788317848048935E-5 2.262772616016312E-5 9.18187872127099 0.003156567799342755 80-81 0.0 6.788317848048935E-5 2.262772616016312E-5 10.013029044723023 0.0032018232516630813 82-83 0.0 6.788317848048935E-5 2.262772616016312E-5 10.865551255533328 0.0033262757455439786 84-85 0.0 6.788317848048935E-5 2.262772616016312E-5 11.730948642528766 0.0033262757455439786 86 0.0 6.788317848048935E-5 2.262772616016312E-5 12.405039918703105 0.0033262757455439786 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6010 0.0 42.26996 1 GGTATCA 3565 0.0 37.4374 1 TCAACGC 7275 0.0 34.169327 4 ATCAACG 7405 0.0 33.6314 3 CAACGCA 7495 0.0 32.860397 5 TATCAAC 8025 0.0 30.919481 2 AACGCAG 8265 0.0 29.73879 6 GTACATG 12495 0.0 25.009254 1 ACGCAGA 9655 0.0 24.83658 7 TACATGG 12870 0.0 23.484802 2 CGCAGAG 10080 0.0 23.33348 8 ACATGGG 13140 0.0 21.884789 3 GCAGAGT 11735 0.0 19.221836 9 CATGGGG 9455 0.0 18.723885 4 TAAGGCG 1180 0.0 18.656467 5 GAGTACA 9435 0.0 18.047916 1 AGAGTAC 9750 0.0 17.775314 10-11 GTATATA 1495 0.0 17.546919 1 AGTACAT 9285 0.0 16.74549 2 GTATTAA 2495 0.0 16.232271 1 >>END_MODULE