##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920872_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4419357 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.255949225192715 31.0 30.0 34.0 27.0 34.0 2 30.265806088985343 31.0 30.0 34.0 26.0 34.0 3 30.40557461187227 31.0 30.0 34.0 27.0 34.0 4 34.05042860307506 35.0 35.0 37.0 30.0 37.0 5 33.57183228238859 35.0 35.0 37.0 28.0 37.0 6 33.51564175512411 35.0 35.0 37.0 28.0 37.0 7 33.330554422283605 35.0 33.0 37.0 27.0 37.0 8 33.260482463851645 35.0 33.0 37.0 27.0 37.0 9 34.59454644646269 38.0 34.0 39.0 27.0 39.0 10-11 34.40781690639611 37.5 34.0 39.0 27.0 39.0 12-13 34.22730523920109 37.0 34.0 39.0 26.5 39.0 14-15 35.130130808622155 38.0 34.0 40.0 26.0 41.0 16-17 34.99948714258658 38.0 34.0 40.0 25.5 41.0 18-19 34.90613148021308 38.0 34.0 40.0 25.0 41.0 20-21 34.791780795260486 38.0 34.0 40.0 25.0 41.0 22-23 34.6474223512606 38.0 34.0 40.0 24.5 41.0 24-25 34.47405957472999 38.0 33.0 40.0 24.0 41.0 26-27 34.29102220074097 38.0 33.0 40.0 23.0 41.0 28-29 34.234502666338116 38.0 33.0 40.0 23.5 41.0 30-31 34.234266432877 38.0 33.0 40.0 23.0 41.0 32-33 34.0957417560971 38.0 33.0 40.0 22.5 41.0 34-35 33.93073754847141 38.0 33.0 40.0 21.5 41.0 36-37 33.74436812866668 38.0 33.0 40.0 19.5 41.0 38-39 33.56510913239188 38.0 32.0 40.0 18.5 41.0 40-41 33.34291391258955 38.0 32.0 40.0 17.5 41.0 42-43 33.381025226067955 38.0 32.0 40.0 17.5 41.0 44-45 33.243209136532755 38.0 32.0 40.0 15.5 41.0 46-47 33.01123432662263 38.0 32.0 40.0 15.0 41.0 48-49 32.751922395045256 37.0 31.0 40.0 12.5 41.0 50-51 32.49518753520026 37.0 31.0 40.0 9.0 41.0 52-53 32.236418555912095 37.0 31.0 40.0 8.5 41.0 54-55 31.9535743548213 36.5 30.5 40.0 7.5 41.0 56-57 31.626794802954365 36.0 30.0 39.0 6.5 41.0 58-59 31.294745027387467 36.0 29.5 39.0 2.0 40.5 60-61 30.96347194852102 35.0 29.0 39.0 2.0 40.0 62-63 30.636181123181494 35.0 29.0 39.0 2.0 40.0 64-65 30.225636331258144 35.0 28.0 38.0 2.0 40.0 66-67 29.79210584254678 34.0 28.0 38.0 2.0 40.0 68-69 29.341978934944606 34.0 28.0 37.0 2.0 39.5 70-71 28.910777744364168 34.0 26.5 36.5 2.0 39.0 72-73 28.460330541298205 34.0 26.0 36.0 2.0 39.0 74-75 28.007022627952438 33.0 26.0 36.0 2.0 38.5 76-77 26.559722375902197 31.5 24.5 34.5 2.0 36.0 78-79 27.395705415968884 33.0 26.0 35.0 2.0 37.0 80-81 27.419500053967127 33.0 26.0 35.0 2.0 36.5 82-83 27.071873804266097 33.0 25.5 35.0 2.0 36.0 84-85 26.741981129834045 33.0 25.0 35.0 2.0 36.0 86-87 26.201413802958214 32.5 24.0 35.0 2.0 35.0 88-89 25.825693534149877 32.0 23.0 35.0 2.0 35.0 90-91 25.451877275359287 32.0 20.5 34.5 2.0 35.0 92-93 25.14166891246849 32.0 19.5 34.0 2.0 35.0 94-95 24.753909222540745 32.0 17.5 34.0 2.0 35.0 96-97 24.213737994011346 31.5 6.0 34.0 2.0 35.0 98-99 23.603067143025555 31.0 2.0 34.0 2.0 35.0 100-101 21.401297971627997 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 103410.0 3 46730.0 4 25077.0 5 17796.0 6 15026.0 7 15163.0 8 16896.0 9 19654.0 10 22040.0 11 25174.0 12 27784.0 13 30456.0 14 32694.0 15 34683.0 16 36604.0 17 38098.0 18 37425.0 19 36293.0 20 37375.0 21 38900.0 22 41466.0 23 47229.0 24 55013.0 25 64439.0 26 76334.0 27 90268.0 28 106996.0 29 126369.0 30 148296.0 31 176041.0 32 210529.0 33 257865.0 34 322767.0 35 419383.0 36 559803.0 37 656616.0 38 377005.0 39 25659.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.28352891702967 19.10440689569965 13.763991516960978 24.848072670309705 2 16.02056588775245 20.2006309967717 38.41033887961529 25.368464235860554 3 19.461529235246594 23.96337475474166 29.00556937274968 27.569526637262072 4 13.80076432913451 16.319741865226508 35.84396768608147 34.03552611955752 5 14.62707109181484 36.87741652836382 34.092471542500355 14.403040837320995 6 33.9938263676666 35.16465096007979 16.803384058419134 14.038138613834473 7 29.652417123018697 31.21017376311358 20.55608818971434 18.581320924153374 8 26.82651864857976 34.80096287275919 19.574138370479453 18.798380108181586 9 26.534068120378784 15.910307337069204 19.228722861862604 38.32690168068941 10-11 25.768034004888424 25.35255537874409 27.49103398234808 21.38837663401941 12-13 26.38090150680047 22.489791026977603 27.423625826696878 23.705681639525046 14-15 23.41073635131968 24.191287168054938 24.74518261049223 27.652793870133152 16-17 23.754224024794834 27.2556473547257 25.502694047012003 23.487434573467464 18-19 23.69449977257938 26.470458021844834 26.851870199157506 22.98317200641828 20-21 24.39036729737934 25.69808368651477 26.61080955908967 23.300739457016217 22-23 24.0636122787134 25.582898730881954 26.482748593602423 23.87074039680222 24-25 23.870632075636163 25.780067555252874 26.534092671461813 23.81520769764915 26-27 23.755682875052205 25.993340576709993 26.402606075900124 23.84837047233767 28-29 23.850192847948303 26.044495432417534 26.356350321028422 23.748961398605736 30-31 24.06974065044257 25.84009991209257 26.246581251906846 23.843578185558012 32-33 23.85648912810486 25.88417119157727 26.114956911020514 24.14438276929735 34-35 24.08001148815126 25.911642854289575 26.230531844143627 23.77781381341554 36-37 24.28398752770173 25.62572263836661 26.174455327156785 23.91583450677488 38-39 23.945628182117478 25.799236546448405 26.2663649128708 23.988770358563322 40-41 24.15918409657359 25.618160781555126 26.395060236273583 23.827594885597705 42-43 24.056318807994753 25.54996891104939 26.229659933839095 24.164052347116762 44-45 23.905873464490526 25.664094479171073 26.36771333942486 24.062318716913538 46-47 24.04192214504049 25.63134697011401 26.171337408915097 24.155393475930406 48-49 23.848779325963218 25.662209936812236 26.207223511800535 24.281787225424008 50-51 23.848195611976543 25.80276966922184 26.223935551888555 24.125099166913063 52-53 24.036109611918413 25.602647178293047 26.255220302124098 24.10602290766444 54-55 23.714305273538166 25.521930973458336 26.397891286280288 24.365872466723204 56-57 23.64174275382857 25.756591910655303 26.25501812073224 24.346647214783886 58-59 23.601831966961324 25.59062650586324 26.30952611279298 24.49801541438245 60-61 23.541230772120812 25.65131401234826 26.38508232642613 24.422372889104807 62-63 23.4830522292296 25.701504294776466 26.350283536827877 24.465159939166057 64-65 23.34216633269481 25.53324424902722 26.290547596930097 24.834041821347874 66-67 23.3597150117734 25.65209822740293 26.142784769781507 24.845401991042166 68-69 23.521498877157992 25.506637796228777 26.215108014445487 24.756755312167744 70-71 23.33354834402163 25.340073352593766 26.17208550182929 25.154292801555318 72-73 23.345636922993336 25.321511926671963 26.156933587781072 25.175917562553625 74-75 23.30238017185884 25.571082149022455 25.96910798616478 25.157429692953926 76-77 23.27683330048184 25.33483006099944 26.191131276156916 25.197205362361807 78-79 23.230853283285068 25.412334859126023 26.107201798114133 25.249610059474776 80-81 23.269767354492167 25.447940540590697 25.994073703251996 25.28821840166514 82-83 23.250267634181725 25.416890944544708 26.04240981992556 25.290431601348008 84-85 23.148661846381444 25.34417771153491 26.000606731780763 25.50655371030289 86-87 23.136542729402663 25.335754720030945 26.027460657665113 25.500241892901283 88-89 23.08493256233965 25.28858755693425 25.892288727359496 25.7341911533666 90-91 22.933395742162897 25.296370093132246 25.9135118897442 25.85672227496066 92-93 22.996114604409502 25.173389468329827 25.927862442008596 25.902633485252075 94-95 22.769301751670994 25.13100224481532 26.03878288717803 26.060913116335648 96-97 22.940570755272557 24.934391101334537 25.9948933959347 26.13014474745821 98-99 22.764437461793197 24.99676129640016 25.880075981966442 26.3587252598402 100-101 22.957493147130958 24.80653168623856 25.92107119618106 26.314903970449414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 37.5 2 49.0 3 84.5 4 82.0 5 79.5 6 155.0 7 341.5 8 515.5 9 569.5 10 498.0 11 435.0 12 472.5 13 512.5 14 555.5 15 603.5 16 690.0 17 794.0 18 889.0 19 1033.0 20 1229.5 21 1412.5 22 1654.5 23 2081.5 24 2558.5 25 3233.5 26 4263.5 27 5682.5 28 7694.0 29 10672.0 30 14800.0 31 20810.0 32 29131.0 33 37760.0 34 46794.0 35 57623.0 36 71443.5 37 85867.5 38 98395.0 39 110221.5 40 121892.5 41 132547.5 42 142488.0 43 153026.5 44 164737.5 45 177149.5 46 187761.0 47 194944.0 48 199918.5 49 202422.5 50 200912.0 51 198167.5 52 194064.5 53 191100.0 54 186240.5 55 174265.0 56 160257.5 57 144376.0 58 129876.5 59 115285.5 60 96633.5 61 79829.5 62 64725.0 63 48824.0 64 35652.5 65 26599.5 66 19801.0 67 14715.5 68 10855.5 69 8019.5 70 5942.5 71 4318.5 72 3071.0 73 2274.0 74 1729.0 75 1265.0 76 871.5 77 520.5 78 260.0 79 123.0 80 62.5 81 33.0 82 20.5 83 9.0 84 2.5 85 4.0 86 5.5 87 2.5 88 0.5 89 1.0 90 1.0 91 0.5 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1855926099656579 2 0.0 3 0.012377366209609227 4 0.01312408117289461 5 0.00703722283581073 6 0.10807002014093904 7 0.1421021202858244 8 0.1240451948100142 9 0.14226051436894552 10-11 0.11428133097190384 12-13 0.1154692865953124 14-15 0.11690614720648275 16-17 0.0668196753509617 18-19 0.07988718720845589 20-21 0.037471514521230126 22-23 0.08443536016664868 24-25 0.05720289173289237 26-27 0.06581274153683443 28-29 0.03976822872648668 30-31 0.024279550169855026 32-33 0.031814582981189346 34-35 0.020172617871785422 36-37 0.024562396746857063 38-39 0.03182589684426943 40-41 0.024641593788417633 42-43 0.013225905940615344 44-45 0.027108015939875416 46-47 0.033964216966404844 48-49 0.00870036070858272 50-51 0.015171890390389372 52-53 0.007059850561970894 54-55 0.012433935525009633 56-57 0.0056003622246403725 58-59 0.003903282762628138 60-61 0.0226390400232432 62-63 0.01001276882587218 64-65 0.007286127823572523 66-67 0.04007370302964888 68-69 0.09047696305141223 70-71 0.02199414982767855 72-73 0.044056182833837595 74-75 0.08631346143794222 76-77 0.24048747363021364 78-79 0.08190105483671041 80-81 0.016880283715481687 82-83 0.012343424620368982 84-85 0.013587949559177952 86-87 0.2582841802551819 88-89 0.6211084553703174 90-91 0.26838745998569474 92-93 0.35496114027447884 94-95 0.001414232885010195 96-97 0.0040164213934289535 98-99 0.0034054727871045496 100-101 0.005034669070636294 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4419357.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.29299931219028 #Duplication Level Percentage of deduplicated Percentage of total 1 71.95129715018726 36.905978352357536 2 13.412066880890757 13.758902745931593 3 5.617172678826261 8.643649030544683 4 2.8939716369991557 5.937619407443835 5 1.617395851314446 4.148054214450565 6 1.0858313781154987 3.3417328878499735 7 0.7162813281768127 2.571815237145559 8 0.5178791980080232 2.1250861877778546 9 0.36961363109294554 1.7062732552883948 >10 1.7111047737039802 15.00194841153859 >50 0.0803461515448495 2.79291713956791 >100 0.025138052079031154 2.0961021387415184 >500 0.0012822649048034474 0.4762515631293437 >1k 6.190241562310228E-4 0.4936694282326476 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.788317848048935E-5 2 0.0 0.0 0.0 0.0 6.788317848048935E-5 3 0.0 0.0 0.0 0.0 6.788317848048935E-5 4 0.0 0.0 0.0 0.0 6.788317848048935E-5 5 0.0 0.0 0.0 2.262772616016312E-5 1.357663569609787E-4 6 0.0 0.0 0.0 4.525545232032624E-5 2.0364953544146807E-4 7 0.0 0.0 0.0 6.788317848048935E-5 2.0364953544146807E-4 8 0.0 0.0 0.0 6.788317848048935E-5 2.0364953544146807E-4 9 0.0 0.0 0.0 9.051090464065248E-5 2.0364953544146807E-4 10-11 0.0 0.0 0.0 9.051090464065248E-5 2.4890498776179433E-4 12-13 0.0 0.0 0.0 9.051090464065248E-5 5.430654278439148E-4 14-15 0.0 0.0 0.0 9.051090464065248E-5 7.919704156057092E-4 16-17 0.0 0.0 0.0 9.051090464065248E-5 0.0010182476772073405 18-19 0.0 0.0 0.0 1.2445249388089716E-4 0.0010861308556878297 20-21 0.0 0.0 0.0 1.9233567236138653E-4 0.0012105833495687267 22-23 0.0 0.0 0.0 3.394158924024468E-4 0.0013576635696097871 24-25 0.0 0.0 0.0 7.240872371252198E-4 0.0014029190219301134 26-27 0.0 0.0 0.0 0.0015047437896508475 0.001516057652730929 28-29 0.0 0.0 0.0 0.005464595867679393 0.0016065685573715815 30-31 0.0 0.0 0.0 0.02169998938759643 0.0016631378727719893 32-33 0.0 0.0 0.0 0.058820774153344024 0.00174233491433256 34-35 0.0 0.0 0.0 0.11083060273247895 0.0018554735451333758 36-37 2.262772616016312E-5 0.0 0.0 0.19588822536853212 0.001878101271293539 38-39 2.262772616016312E-5 0.0 0.0 0.33699472570330935 0.001878101271293539 40-41 2.262772616016312E-5 0.0 0.0 0.5003442808535269 0.001878101271293539 42-43 2.262772616016312E-5 0.0 0.0 0.6728354373724503 0.0019120428605337836 44-45 4.525545232032624E-5 0.0 0.0 0.8849816839870597 0.0020025537651744358 46-47 4.525545232032624E-5 0.0 0.0 1.133049445880928 0.0020364953544146805 48-49 4.525545232032624E-5 0.0 0.0 1.3941960334953705 0.00210437853289517 50-51 4.525545232032624E-5 0.0 0.0 1.6828692499836515 0.0022175171636959856 52-53 4.525545232032624E-5 0.0 0.0 1.9792811488187083 0.002387225109897209 54-55 4.525545232032624E-5 0.0 0.0 2.3095780675786095 0.002443794425297617 56-57 4.525545232032624E-5 0.0 0.0 2.6946227697830247 0.0024664221514577797 58-59 4.525545232032624E-5 0.0 0.0 3.107861618783004 0.002489049877617943 60-61 4.525545232032624E-5 0.0 0.0 3.553763590495178 0.0025229914668581876 62-63 4.525545232032624E-5 0.0 0.0 4.008411178368256 0.002647443960739085 64-65 4.525545232032624E-5 0.0 0.0 4.489114592914762 0.0026587578238191664 66-67 4.525545232032624E-5 0.0 0.0 5.040914323056499 0.0026813855499793295 68-69 4.525545232032624E-5 0.0 0.0 5.64037935835462 0.002692699413059411 70-71 4.525545232032624E-5 1.131386308008156E-5 0.0 6.281038169127319 0.0027605825915399005 72-73 4.525545232032624E-5 2.262772616016312E-5 0.0 6.943340399972213 0.002952918263901287 74-75 4.525545232032624E-5 2.262772616016312E-5 0.0 7.620644813261295 0.0031452539362626735 76-77 4.525545232032624E-5 2.262772616016312E-5 0.0 8.355785694615754 0.003213137114743163 78-79 4.525545232032624E-5 2.262772616016312E-5 0.0 9.160812308215878 0.003258392567063489 80-81 4.525545232032624E-5 2.262772616016312E-5 0.0 9.99191737621559 0.00333758960862406 82-83 4.525545232032624E-5 2.262772616016312E-5 0.0 10.84377206910417 0.0035299252809854464 84-85 4.525545232032624E-5 2.262772616016312E-5 0.0 11.708897923385688 0.003563866870225691 86-87 4.525545232032624E-5 2.262772616016312E-5 0.0 12.612094926931679 0.003744888679506996 88-89 4.525545232032624E-5 2.262772616016312E-5 0.0 13.552333518201856 0.00391459662570822 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3580 0.0 42.901863 1 GTATCAA 6235 0.0 42.7079 1 TCAACGC 7580 0.0 34.19681 4 ATCAACG 7765 0.0 33.38208 3 CAACGCA 7935 0.0 32.782475 5 TATCAAC 8295 0.0 31.817888 2 AACGCAG 8640 0.0 30.217733 6 GTACATG 13010 0.0 26.425163 1 ACGCAGA 10115 0.0 25.388638 7 TACATGG 13535 0.0 24.900785 2 CGCAGAG 10450 0.0 24.435978 8 ACATGGG 13755 0.0 23.642433 3 TACACCG 530 0.0 22.390932 5 CATGGGG 9760 0.0 20.381042 4 GCAGAGT 12435 0.0 19.809814 9 GTATATA 1410 0.0 19.222612 1 GAGTACA 10035 0.0 18.432697 1 AGAGTAC 10505 0.0 17.641863 10-11 GTATAGA 1380 0.0 17.573074 1 AGTACAT 9805 0.0 17.380402 2 >>END_MODULE