##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920871_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3524428 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.670892978945805 31.0 30.0 33.0 22.0 34.0 2 28.70218571637724 31.0 28.0 34.0 20.0 34.0 3 28.768349927988314 31.0 28.0 34.0 22.0 34.0 4 32.2648636885191 35.0 32.0 37.0 23.0 37.0 5 32.22628920210599 35.0 32.0 37.0 23.0 37.0 6 32.35442034849343 35.0 32.0 37.0 25.0 37.0 7 32.19445680263578 35.0 32.0 37.0 23.0 37.0 8 32.13830442840654 35.0 32.0 37.0 23.0 37.0 9 33.39608526546719 37.0 33.0 39.0 22.0 39.0 10-11 33.20661608068032 37.0 32.5 39.0 21.5 39.0 12-13 33.037136238845 37.0 32.0 39.0 19.0 39.0 14-15 33.794285200321866 38.0 32.5 40.0 18.0 41.0 16-17 33.69652508151677 38.0 32.0 40.0 17.5 41.0 18-19 33.59826261169188 38.0 32.0 40.0 17.5 41.0 20-21 33.50587868442766 38.0 32.0 40.0 18.0 41.0 22-23 33.28680909356071 38.0 32.0 40.0 17.0 41.0 24-25 33.08918638712438 38.0 32.0 40.0 16.0 41.0 26-27 33.11265629486544 38.0 32.0 40.0 15.5 41.0 28-29 32.949297871881626 38.0 32.0 40.0 11.5 41.0 30-31 32.69760284505741 38.0 31.0 40.0 9.5 41.0 32-33 32.449132029367604 37.0 31.0 40.0 9.0 41.0 34-35 32.11402446013935 37.0 30.0 40.0 8.0 41.0 36-37 31.804361303451227 37.0 30.0 40.0 7.5 41.0 38-39 31.595040670429356 37.0 30.0 40.0 2.0 41.0 40-41 31.389819426017496 37.0 30.0 40.0 2.0 41.0 42-43 31.146275934704867 36.0 30.0 40.0 2.0 41.0 44-45 30.853349536435417 36.0 29.0 39.0 2.0 40.5 46-47 30.583013186820672 36.0 28.5 39.0 2.0 40.0 48-49 30.264906390483787 35.5 28.0 39.0 2.0 40.0 50-51 29.116926491334198 34.0 26.0 38.0 2.0 39.5 52-53 29.565565674770486 34.5 27.5 38.5 2.0 39.5 54-55 30.213215165694972 35.0 28.0 39.0 2.0 40.0 56-57 30.15713415056287 35.0 28.0 39.0 2.0 40.0 58-59 29.907952581241553 35.0 28.0 39.0 2.0 40.0 60-61 29.576170658047204 35.0 28.0 39.0 2.0 40.0 62-63 29.180932905992123 34.5 26.5 38.5 2.0 40.0 64-65 28.751383061308104 34.0 26.0 38.0 2.0 40.0 66-67 28.35280916506168 34.0 26.0 37.5 2.0 40.0 68-69 27.90066033410244 34.0 25.5 37.0 2.0 39.5 70-71 27.562204278254512 34.0 25.0 36.0 2.0 39.0 72-73 27.10228283852018 33.0 24.0 36.0 2.0 39.0 74-75 26.658779098338794 33.0 23.0 35.0 2.0 38.5 76-77 26.239240807302632 32.5 21.5 35.0 2.0 37.0 78-79 25.77257259901465 32.0 20.0 35.0 2.0 37.0 80-81 25.31867738537998 32.0 18.5 35.0 2.0 36.0 82-83 24.839030191565836 32.0 16.5 35.0 2.0 36.0 84-85 24.434270610720375 31.0 9.0 34.0 2.0 35.0 86-87 23.969985484169346 31.0 4.5 34.0 2.0 35.0 88-89 23.42971795706991 31.0 2.0 34.0 2.0 35.0 90-91 22.91275818373932 30.5 2.0 34.0 2.0 35.0 92-93 22.357621293441092 30.0 2.0 34.0 2.0 35.0 94-95 21.70665977571396 30.0 2.0 34.0 2.0 35.0 96-97 21.047301434445533 29.0 2.0 34.0 2.0 35.0 98 20.643644869465344 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 170473.0 3 29760.0 4 22009.0 5 17888.0 6 16876.0 7 17288.0 8 19906.0 9 22570.0 10 25059.0 11 26963.0 12 28390.0 13 28551.0 14 27249.0 15 28196.0 16 31027.0 17 33118.0 18 34185.0 19 33137.0 20 34385.0 21 36178.0 22 40046.0 23 44824.0 24 50739.0 25 58232.0 26 67219.0 27 77711.0 28 89281.0 29 103846.0 30 120429.0 31 141276.0 32 168547.0 33 204119.0 34 251895.0 35 318599.0 36 401874.0 37 430921.0 38 247816.0 39 23846.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.480452078695734 17.75668704958223 12.921257284070714 24.84160358765133 2 16.10580299990663 19.616941897916444 38.86171215415409 25.41554294802283 3 19.506114541265383 23.70707526193927 28.60841367007841 28.17839652671694 4 13.456518889025732 15.388555514376408 35.81059951224468 35.34432608435318 5 14.582849112339554 36.77392037519642 33.709982770955875 14.933247741508145 6 33.99270295474708 34.35707275873832 17.031670288890567 14.618553997624034 7 29.558440393865844 31.444652450197097 20.59117902371237 18.405728132224688 8 27.18921521807664 33.7957142018035 19.797562590252234 19.21750798986763 9 27.302870139494978 15.542976051716762 19.188276792716437 37.96587701607182 10-11 25.896606739194766 25.155805468520132 27.172757443975996 21.774830348309102 12-13 26.60287340650448 22.480534150680047 27.279400519089315 23.63719192372616 14-15 23.674679753643115 24.078147885633474 24.81661700221149 27.430555358511917 16-17 23.714103547040295 27.047324326364254 25.583786434158455 23.654785692436995 18-19 23.68183974052758 26.18252875481565 27.076828144367436 23.058803360289332 20-21 24.538128588998795 25.45384281528707 26.704188343046916 23.303840252667218 22-23 24.23698955256392 25.26252069280755 26.6614098628545 23.839079891774027 24-25 23.923236325448407 25.60525237693308 26.573201930220986 23.898309367397527 26-27 23.689066503879218 25.650707344600686 26.665478886136327 23.99474726538377 28-29 23.798636779142324 25.912239463568902 26.525149466010323 23.76397429127845 30-31 23.940550374022752 25.70338178225394 26.27397885181409 24.08208899190922 32-33 23.677099821002006 25.92827451751066 26.147144439249587 24.247481222237752 34-35 24.132904170081176 25.73122228126949 26.252343665719476 23.88352988292986 36-37 24.23220209178847 25.454517201284887 26.28219128556431 24.031089421362335 38-39 23.98906499555965 25.622632335555977 26.224131680618523 24.164170988265845 40-41 24.131244637884397 25.545517770157993 26.38541390544435 23.937823686513262 42-43 23.987354601492314 25.522346324548227 26.243874199566587 24.24642487439287 44-45 23.913380314184202 25.52419099874848 26.30090739387297 24.261521293194345 46-47 24.03329578957877 25.605391262269066 26.149678390675973 24.211634557476195 48-49 23.90685785891265 25.628257340586106 26.109161848887872 24.355722951613362 50-51 23.751029850206454 25.789100916919104 26.247375359290636 24.212493873583803 52-53 23.948726657960492 25.471086545883942 26.305591261379835 24.27459553477573 54-55 23.572852616403033 25.55085749733677 26.408547176351764 24.467742709908432 56-57 23.57945509724831 25.592590751486416 26.3428394076464 24.48511474361887 58-59 23.543558691807252 25.19239322402152 26.438831579932287 24.825216504238938 60-61 23.39388450884296 25.225845524851554 26.846646102797315 24.533623863508172 62-63 23.416152579913497 25.20943110359315 26.74810976190683 24.62630655458652 64-65 23.36658490906099 25.23536003385235 26.562241093989424 24.835813963097234 66-67 23.332293997808843 25.26454604218372 26.46522083124801 24.93793912875942 68-69 23.47765512715191 24.989602928726796 26.602402321651773 24.930339622469525 70-71 23.23598723426004 24.849002286836786 26.601664865015696 25.313345613887478 72-73 23.136389427200903 24.91170876318817 26.51107195597011 25.440829853640818 74-75 23.104253632460082 25.049521578428262 26.606715123188394 25.23950966592326 76-77 23.128647267894536 24.700750221915566 26.784870773766244 25.385731736423654 78-79 23.037240777048336 24.843347588176222 26.663074491801186 25.45633714297425 80-81 23.08033602019674 24.724580843045384 26.680058280851526 25.515024855906344 82-83 22.979242475246046 24.59078134463099 26.827600882196585 25.602375297926383 84-85 22.89299564233715 24.564038001268226 26.790524022657287 25.752442333737335 86-87 22.88960366653322 24.538100524821242 26.81735916305265 25.754936645592885 88-89 22.850559388398032 24.31316011767666 26.772863067124756 26.063417426800555 90-91 22.802214187809668 24.2693620082052 26.802337176100583 26.126086627884547 92-93 22.95522011618983 23.997586590117713 26.933830780056887 26.11336251363557 94-95 22.740742775699037 23.87503485590969 27.07464723114902 26.309575137242252 96-97 22.91129296394096 23.591374024797947 27.122406477466782 26.374926533794312 98 22.896990741729173 23.554347043248818 26.94924561446958 26.599416600552427 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 183.0 1 141.5 2 166.5 3 243.5 4 231.5 5 272.0 6 406.0 7 742.5 8 1155.5 9 1287.5 10 1268.5 11 1301.0 12 1417.5 13 1585.5 14 1793.0 15 1987.5 16 2143.0 17 2264.5 18 2354.0 19 2441.0 20 2504.5 21 2612.5 22 2875.5 23 3286.5 24 3851.5 25 4649.5 26 5720.5 27 7310.5 28 9499.0 29 12847.5 30 18277.0 31 25887.5 32 32644.5 33 38858.5 34 46675.5 35 54937.0 36 63408.5 37 71809.5 38 79688.0 39 87533.0 40 95485.0 41 103499.0 42 113455.0 43 124118.0 44 131910.0 45 139938.0 46 148125.5 47 153106.5 48 156613.5 49 159197.5 50 160194.0 51 159731.0 52 159627.5 53 159469.0 54 154037.0 55 145451.0 56 134511.5 57 121796.5 58 111554.5 59 98317.0 60 82269.5 61 67075.5 62 53993.0 63 41273.0 64 29799.5 65 22154.5 66 16452.0 67 12308.5 68 8675.5 69 5917.5 70 4170.0 71 3023.0 72 2477.0 73 2006.5 74 1550.5 75 1228.5 76 823.0 77 449.5 78 258.0 79 134.5 80 70.0 81 48.0 82 35.0 83 28.0 84 22.5 85 15.0 86 8.5 87 9.5 88 7.0 89 7.5 90 8.0 91 4.5 92 2.5 93 1.5 94 2.0 95 1.5 96 1.0 97 2.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.36394558209161887 2 0.022273117793866124 3 0.017449640055067092 4 0.015037901185667576 5 0.020627460682981748 6 0.022982452755454217 7 0.013817845051736053 8 0.007859431374396071 9 0.0 10-11 2.8373398463523723E-5 12-13 0.005078838324970747 14-15 0.00312107383098761 16-17 0.005504439301923603 18-19 0.036289576634846846 20-21 0.07494833204139792 22-23 0.09297962676496725 24-25 0.0606339525165502 26-27 0.06959994643102371 28-29 0.0535689762991328 30-31 0.04864619166571143 32-33 0.018315028708204565 34-35 0.31877513173768907 36-37 0.4877387195879729 38-39 0.4453488622834684 40-41 0.4544850965887231 42-43 0.40791016301084887 44-45 0.3828706388667892 46-47 0.38058658029047554 48-49 0.37248597502913944 50-51 0.36871231303349083 52-53 0.42676428628986035 54-55 0.42726082076297206 56-57 0.3988874222994483 58-59 0.3854384314277381 60-61 0.3990434759909977 62-63 0.38101218126742836 64-65 0.42760130154453435 66-67 0.4476187341605503 68-69 0.392233860359752 70-71 0.3510214990914838 72-73 0.33778530870824997 74-75 0.32098825681784393 76-77 0.3196972671877536 78-79 0.3188035051361526 80-81 0.3342953806972365 82-83 0.3292874758684246 84-85 0.3305642787992832 86-87 0.31598035198903196 88-89 0.3575473807380942 90-91 0.33760088161823704 92-93 0.3278829926444802 94-95 0.3334583654425626 96-97 0.33362860583334375 98 0.328251846824506 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3524428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.92003409535373 #Duplication Level Percentage of deduplicated Percentage of total 1 70.79373170004943 29.676756466033964 2 11.091563845248471 9.299174691272173 3 5.30342361666449 6.669590964980389 4 3.224583598453602 5.406986175619738 5 2.119776845137981 4.443055881136275 6 1.4523027007560685 3.6528347239481214 7 1.0701211304148759 3.1401659991205055 8 0.8236128383085412 2.7620702610612082 9 0.6444984756923069 2.431565826788251 >10 3.2839632571698765 23.84233185196252 >50 0.1406758109882454 4.013448317471676 >100 0.04846282939484003 3.4008226640102333 >500 0.0024625137944107125 0.6812231459767741 >1k 8.208379268011652E-4 0.579973030618145 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 2.8373398463523727E-5 3 0.0 0.0 0.0 0.0 2.8373398463523727E-5 4 0.0 0.0 0.0 0.0 2.8373398463523727E-5 5 0.0 0.0 0.0 0.0 8.512019539057118E-5 6 0.0 0.0 0.0 0.0 8.512019539057118E-5 7 0.0 0.0 0.0 0.0 8.512019539057118E-5 8 0.0 0.0 0.0 0.0 8.512019539057118E-5 9 0.0 0.0 0.0 0.0 8.512019539057118E-5 10-11 0.0 0.0 0.0 0.0 8.512019539057118E-5 12-13 0.0 0.0 0.0 1.4186699231761863E-5 2.1280048847642795E-4 14-15 0.0 0.0 0.0 5.674679692704745E-5 2.8373398463523727E-4 16-17 0.0 0.0 0.0 1.134935938540949E-4 3.404807815622847E-4 18-19 0.0 0.0 0.0 1.7024039078114236E-4 3.6885418002580845E-4 20-21 0.0 0.0 0.0 2.1280048847642795E-4 3.830408792575703E-4 22-23 0.0 0.0 0.0 4.965344731116652E-4 4.256009769528559E-4 24-25 0.0 0.0 0.0 0.0012909896300903295 4.256009769528559E-4 26-27 0.0 0.0 0.0 0.002496859064790088 4.681610746481415E-4 28-29 0.0 0.0 0.0 0.009434154989121639 4.8234777387990335E-4 30-31 0.0 0.0 0.0 0.03413319835161904 4.965344731116652E-4 32-33 0.0 0.0 0.0 0.08590046384831808 5.107211723434271E-4 34-35 0.0 0.0 0.0 0.15829519002799886 6.24214766197522E-4 36-37 0.0 1.4186699231761863E-5 0.0 0.2738742286691628 6.809615631245694E-4 38-39 0.0 2.8373398463523727E-5 0.0 0.46092585803994296 6.809615631245694E-4 40-41 0.0 2.8373398463523727E-5 0.0 0.6797415069906378 6.809615631245694E-4 42-43 0.0 2.8373398463523727E-5 0.0 0.9059200528426172 6.809615631245694E-4 44-45 0.0 2.8373398463523727E-5 0.0 1.1797233480156213 7.093349615880932E-4 46-47 0.0 2.8373398463523727E-5 0.0 1.507634714058565 7.377083600516169E-4 48-49 0.0 2.8373398463523727E-5 0.0 1.85786175799307 7.377083600516169E-4 50-51 0.0 2.8373398463523727E-5 0.0 2.238476711682009 7.660817585151406E-4 52-53 0.0 2.8373398463523727E-5 0.0 2.6150626427891277 8.228285554421881E-4 54-55 0.0 2.8373398463523727E-5 0.0 3.038720041947232 8.228285554421881E-4 56-57 2.8373398463523727E-5 5.674679692704745E-5 0.0 3.52939540827618 8.512019539057118E-4 58-59 2.8373398463523727E-5 5.674679692704745E-5 0.0 4.055792883270704 8.512019539057118E-4 60-61 2.8373398463523727E-5 5.674679692704745E-5 0.0 4.6144083522205595 8.512019539057118E-4 62-63 2.8373398463523727E-5 5.674679692704745E-5 0.0 5.17750681812765 8.795753523692355E-4 64-65 2.8373398463523727E-5 5.674679692704745E-5 0.0 5.775731551332585 8.795753523692355E-4 66-67 2.8373398463523727E-5 5.674679692704745E-5 0.0 6.4732206190621575 8.937620516009973E-4 68-69 2.8373398463523727E-5 5.674679692704745E-5 0.0 7.229924969385103 9.079487508327592E-4 70-71 2.8373398463523727E-5 5.674679692704745E-5 0.0 8.01845008608489 9.36322149296283E-4 72-73 2.8373398463523727E-5 5.674679692704745E-5 0.0 8.823077106412729 0.0010072556454550922 74-75 2.8373398463523727E-5 5.674679692704745E-5 0.0 9.647693185958119 0.0010781891416139016 76-77 2.8373398463523727E-5 5.674679692704745E-5 0.0 10.542703667091512 0.0010781891416139016 78-79 2.8373398463523727E-5 5.674679692704745E-5 0.0 11.517542704802029 0.0010923758408456635 80-81 2.8373398463523727E-5 5.674679692704745E-5 0.0 12.526018406391051 0.0011207492393091871 82-83 2.8373398463523727E-5 5.674679692704745E-5 0.0 13.548567313617983 0.0011633093370044727 84-85 4.256009769528559E-5 5.674679692704745E-5 0.0 14.568122827307013 0.0011633093370044727 86 5.674679692704745E-5 5.674679692704745E-5 0.0 15.352193320448027 0.0011633093370044727 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7680 0.0 40.691483 1 GGTATCA 4380 0.0 35.832344 1 ATCAACG 9660 0.0 31.766409 3 TCAACGC 9655 0.0 31.735353 4 TATCAAC 9805 0.0 31.344753 2 CAACGCA 9955 0.0 30.825066 5 AACGCAG 10470 0.0 29.522438 6 GTACATG 12725 0.0 26.692762 1 ACGCAGA 11925 0.0 25.416775 7 TACATGG 13300 0.0 25.315239 2 CGCAGAG 12260 0.0 24.534567 8 ACATGGG 13975 0.0 23.336563 3 GTATAGG 690 0.0 22.012016 1 CATGGGG 9675 0.0 20.860313 4 GCAGAGT 13615 0.0 20.77879 9 TATACGG 145 7.779552E-4 18.980268 5 AGAGTAC 11210 0.0 18.774261 10-11 GTATAGT 575 0.0 18.41005 1 TAAGGTG 1555 0.0 18.288599 5 GTAAGGT 1145 0.0 18.027113 4 >>END_MODULE