##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920870_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2470505 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.719093059920947 31.0 30.0 33.0 23.0 34.0 2 28.755181632905014 31.0 28.0 34.0 22.0 34.0 3 28.82722317906663 31.0 28.0 34.0 22.0 34.0 4 32.32441262009184 35.0 33.0 37.0 24.0 37.0 5 32.296457606845564 35.0 32.0 37.0 24.0 37.0 6 32.42525920813761 35.0 33.0 37.0 25.0 37.0 7 32.27143721627765 35.0 32.0 37.0 23.0 37.0 8 32.21464558865495 35.0 32.0 37.0 23.0 37.0 9 33.48537120953004 37.0 33.0 39.0 23.0 39.0 10-11 33.29882453182648 37.0 33.0 39.0 22.0 39.0 12-13 33.13628549628517 37.0 32.0 39.0 19.5 39.0 14-15 33.91136144229621 38.0 33.0 40.0 18.5 41.0 16-17 33.8104998775554 38.0 32.5 40.0 18.0 41.0 18-19 33.70954744070544 38.0 32.0 40.0 18.0 41.0 20-21 33.62448102715841 38.0 32.0 40.0 18.0 41.0 22-23 33.40393057289906 38.0 32.0 40.0 17.5 41.0 24-25 33.21443126000555 38.0 32.0 40.0 16.5 41.0 26-27 33.242877670759626 38.0 32.0 40.0 16.0 41.0 28-29 33.08222974654979 38.0 32.0 40.0 15.0 41.0 30-31 32.831144037352686 38.0 31.5 40.0 10.5 41.0 32-33 32.58236858456065 37.5 31.0 40.0 9.0 41.0 34-35 32.25537207979745 37.0 30.5 40.0 8.5 41.0 36-37 31.952089754928647 37.0 30.0 40.0 8.0 41.0 38-39 31.744690255635994 37.0 30.0 40.0 6.0 41.0 40-41 31.543423105802255 37.0 30.0 40.0 2.0 41.0 42-43 31.304794971068667 36.5 30.0 40.0 2.0 41.0 44-45 31.01513475989727 36.0 29.5 39.0 2.0 41.0 46-47 30.74739820401092 36.0 29.0 39.0 2.0 40.0 48-49 30.444075401587934 36.0 28.0 39.0 2.0 40.0 50-51 29.289349950718577 34.0 26.5 38.0 2.0 39.5 52-53 29.735597175476272 34.5 27.5 38.5 2.0 39.5 54-55 30.400815015553498 36.0 28.0 39.0 2.0 40.0 56-57 30.35503813997543 35.5 28.0 39.0 2.0 41.0 58-59 30.11060795262507 35.0 28.0 39.0 2.0 40.5 60-61 29.789920886620347 35.0 28.0 39.0 2.0 40.0 62-63 29.399238617205796 35.0 27.0 38.5 2.0 40.0 64-65 28.976141315237168 34.0 26.0 38.0 2.0 40.0 66-67 28.585185417556332 34.0 26.0 38.0 2.0 40.0 68-69 28.13919502287994 34.0 26.0 37.0 2.0 39.5 70-71 27.7969730884981 34.0 25.5 36.5 2.0 39.0 72-73 27.332746746110615 33.0 24.5 36.0 2.0 39.0 74-75 26.892376457444936 33.0 24.0 35.5 2.0 38.5 76-77 26.46047731131894 33.0 22.5 35.0 2.0 37.5 78-79 25.989949423296046 32.0 20.5 35.0 2.0 37.0 80-81 25.533821829949748 32.0 19.5 35.0 2.0 36.0 82-83 25.04558602391009 32.0 18.0 35.0 2.0 36.0 84-85 24.634815958680512 31.5 13.0 34.5 2.0 35.5 86-87 24.167021924667225 31.0 7.0 34.0 2.0 35.0 88-89 23.61662231001354 31.0 2.0 34.0 2.0 35.0 90-91 23.09825744129237 31.0 2.0 34.0 2.0 35.0 92-93 22.549668994800655 30.0 2.0 34.0 2.0 35.0 94-95 21.90426107212898 30.0 2.0 34.0 2.0 35.0 96-97 21.246146638035544 29.0 2.0 34.0 2.0 35.0 98 20.84408774724196 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 116693.0 3 19821.0 4 14662.0 5 11794.0 6 11522.0 7 11740.0 8 13455.0 9 15506.0 10 17025.0 11 18421.0 12 19191.0 13 19443.0 14 18351.0 15 19548.0 16 21388.0 17 22826.0 18 23347.0 19 22832.0 20 23721.0 21 25443.0 22 27784.0 23 31106.0 24 35564.0 25 40421.0 26 46244.0 27 53541.0 28 62646.0 29 71986.0 30 84204.0 31 98604.0 32 117213.0 33 142020.0 34 177152.0 35 224309.0 36 282025.0 37 308336.0 38 182838.0 39 17782.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.13285493985145 18.20145825513127 13.061328289402057 24.604358515615225 2 16.16453286454736 19.776058068136454 38.82185134291473 25.237557724401462 3 19.47271640804905 23.59752167562193 29.02569820279378 27.904063713535237 4 13.474028537132888 15.516969857678692 36.02395030190902 34.985051303279405 5 14.487786155699794 36.69003523909466 33.95102964229728 14.871148962908261 6 33.76338757393455 34.720462719252964 16.964793610807796 14.551356096004689 7 29.256936552963214 31.527901871109275 20.79522650344778 18.419935072479728 8 26.75782775953647 33.965960929919255 20.070688371637374 19.205522938906903 9 26.916197295694605 15.608144893452957 19.52038146047063 37.95527635038181 10-11 25.756844401619183 25.259557309043558 27.358845126572323 21.624753162764936 12-13 26.315377220057684 22.7154581794262 27.344532712644842 23.624631887871274 14-15 23.48480769939148 24.256819362143176 24.90862922998394 27.349743708481398 16-17 23.43987567743492 27.36397867830767 25.71184302778394 23.484302616473467 18-19 23.4556843082855 26.475710033635703 27.250709998204126 22.817895659874672 20-21 24.21583019997586 25.804667264576896 26.92248798710847 23.05701454833877 22-23 23.99538597019721 25.528777012666904 26.808453139215626 23.66738387792026 24-25 23.781514834423646 25.756575756403617 26.79943368328833 23.662475725884406 26-27 23.47322744142949 25.90236813723753 26.777520671200065 23.846883750132914 28-29 23.583519467659205 26.078441696249033 26.718534523783006 23.619504312308763 30-31 23.72662941804307 25.924734237557068 26.558627704171712 23.790008640228148 32-33 23.496356957811802 25.95486894805006 26.543439791324147 24.005334302813992 34-35 23.912395076948815 25.883682489715554 26.45944078533943 23.744481647996196 36-37 24.037387138749423 25.636877709798778 26.453046018225386 23.87268913322641 38-39 23.789127744248038 25.721993992294394 26.504935133368136 23.983943130089433 40-41 23.901485139758304 25.654957266677602 26.61577338093295 23.82778421263114 42-43 23.915941041190003 25.569816418735737 26.42687038438083 24.08737215569343 44-45 23.756750057901176 25.636892596369904 26.54277169871886 24.063585647010065 46-47 23.804985594917415 25.661850615809406 26.42099978851011 24.11216400076307 48-49 23.69647498949753 25.77492782345776 26.214182924163644 24.314414262881066 50-51 23.593450977500456 25.846167971916856 26.386936244353077 24.17344480622961 52-53 23.71737934774346 25.605339549094445 26.57624056751612 24.10104053564598 54-55 23.503191911439497 25.618361702266046 26.61693160236231 24.26151478393215 56-57 23.307051350955394 25.662818618152794 26.643338469438078 24.386791561453734 58-59 23.32283572389113 25.368802941362308 26.676727468284195 24.631633866462362 60-61 23.222788683684893 25.311548160174258 26.89087839004834 24.574784766092506 62-63 23.21714878702651 25.251895258380053 26.928901298665416 24.602054655928022 64-65 23.12038839608563 25.294750368196596 26.713958705882973 24.870902529834797 66-67 23.109004357799844 25.356637817961225 26.65676085119809 24.87759697304084 68-69 23.2504896196967 25.09549082558648 26.677004606356736 24.977014948360083 70-71 23.009591137743232 24.922010060702167 26.81763271288004 25.25076608867456 72-73 22.903280243543296 24.892741078476348 26.77544560149577 25.428533076484594 74-75 22.923512423475064 25.05191675776295 26.77653987905446 25.248030939707526 76-77 22.88987130103149 24.767952844217156 26.93143878576133 25.41073706899002 78-79 22.743188654850698 24.836558577405857 26.84428925517815 25.5759635125653 80-81 22.848384374393344 24.705068420714902 26.95647017828293 25.49007702660882 82-83 22.728670119425157 24.540515493350128 27.056151794666867 25.674662592557844 84-85 22.60501910047359 24.525280181905792 27.056313755813242 25.813386961807378 86-87 22.720989932245484 24.44386558893968 27.054562567963636 25.780581910851197 88-89 22.646557733461375 24.244686175199824 26.99978307603063 26.108973015308166 90-91 22.51568173644529 24.249592688104176 27.096805899001268 26.13791967644926 92-93 22.7076025149223 23.992881804987125 27.140778469328165 26.15873721076241 94-95 22.440648601054956 23.89691847081815 27.283753620622154 26.378679307504736 96-97 22.691131014097927 23.604838123411785 27.27449023810075 26.429540624389535 98 22.62645813264804 23.481925734122374 27.25922231842482 26.632393814804768 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 142.0 1 117.0 2 127.0 3 201.0 4 215.5 5 217.5 6 307.0 7 572.5 8 871.5 9 985.5 10 932.5 11 900.0 12 1029.5 13 1137.0 14 1200.5 15 1369.5 16 1511.0 17 1543.5 18 1533.0 19 1542.5 20 1639.5 21 1739.0 22 1919.5 23 2208.0 24 2595.5 25 3185.0 26 4009.5 27 5243.0 28 7036.5 29 9701.5 30 13688.0 31 18864.0 32 23745.0 33 28228.0 34 33655.5 35 40045.5 36 46536.5 37 53152.5 38 59557.0 39 65708.5 40 71887.5 41 77282.5 42 83346.0 43 89769.0 44 95106.0 45 100582.5 46 105620.0 47 108468.5 48 109999.5 49 110809.0 50 110865.0 51 110692.0 52 109377.0 53 107896.0 54 104515.5 55 99517.5 56 91740.5 57 81300.0 58 73117.0 59 63975.5 60 53074.5 61 42872.0 62 34695.0 63 27120.5 64 20117.5 65 15024.0 66 11268.5 67 8702.5 68 6431.5 69 4685.5 70 3431.0 71 2504.5 72 1950.0 73 1498.5 74 1135.0 75 809.0 76 505.5 77 309.5 78 181.0 79 114.0 80 74.0 81 41.0 82 29.0 83 20.0 84 15.0 85 10.5 86 4.5 87 3.0 88 4.5 89 5.0 90 4.5 91 4.5 92 3.0 93 3.5 94 4.0 95 2.5 96 0.5 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3615859915280479 2 0.023436503872689998 3 0.01817442182873542 4 0.01578624613186373 5 0.02108880573000257 6 0.023638891643611326 7 0.014814784831441346 8 0.00914792724564411 9 0.0 10-11 2.0238777092132984E-5 12-13 0.0052620820439545765 14-15 0.003076294118004214 16-17 0.006354976006929758 18-19 0.0387167805772504 20-21 0.07719069582939521 22-23 0.09635681773564514 24-25 0.06348904373802117 26-27 0.07255601587529675 28-29 0.057073351399815016 30-31 0.0502528835197662 32-33 0.01837680959965675 34-35 0.3208453332415842 36-37 0.4884021687873532 38-39 0.4451316633643729 40-41 0.4550284253624259 42-43 0.4064553603413067 44-45 0.3810961726448641 46-47 0.38026638278408664 48-49 0.37154346985737735 50-51 0.36832550429972816 52-53 0.4259048251268466 54-55 0.4265119884396105 56-57 0.397509820866584 58-59 0.3832617217937223 60-61 0.3970848065476491 62-63 0.3789913398272823 64-65 0.4267143762105318 66-67 0.4455364389062156 68-69 0.391276277522207 70-71 0.3500903661397164 72-73 0.3382102039866343 74-75 0.32013697604335956 76-77 0.31811309833414625 78-79 0.3177083227923036 80-81 0.33349456892416734 82-83 0.32892060530134526 84-85 0.32914323184935873 86-87 0.3153606246496162 88-89 0.356728685025936 90-91 0.33699587736110637 92-93 0.32718007047142184 94-95 0.3327659729488505 96-97 0.3330493158281404 98 0.3282324868802128 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2470505.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.26981670353985 #Duplication Level Percentage of deduplicated Percentage of total 1 73.82008894407576 40.062026960340006 2 12.260436424126949 13.307432748855463 3 5.261947787100053 8.56694825728551 4 2.84250522315189 6.170489497572309 5 1.690366815053327 4.586794860734525 6 1.0240689933395644 3.334562193619004 7 0.7068886409194355 2.6853901880758513 8 0.49371359315007546 2.1434996963440516 9 0.3579621391632942 1.74838857112791 >10 1.4689091084429948 12.98646033490376 >50 0.052825955152043955 1.9207441445423512 >100 0.018937062793879703 1.8031596587609597 >500 8.245804909603528E-4 0.3011663700445693 >1k 5.247330397010568E-4 0.382936517793476 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.047755418426597E-5 0.0 5 0.0 0.0 0.0 4.047755418426597E-5 0.0 6 0.0 0.0 0.0 4.047755418426597E-5 0.0 7 0.0 0.0 0.0 8.095510836853194E-5 0.0 8 0.0 0.0 0.0 8.095510836853194E-5 0.0 9 0.0 0.0 0.0 8.095510836853194E-5 0.0 10-11 0.0 0.0 0.0 1.2143266255279792E-4 0.0 12-13 0.0 0.0 0.0 1.2143266255279792E-4 0.0 14-15 0.0 0.0 0.0 1.2143266255279792E-4 0.0 16-17 0.0 0.0 0.0 1.2143266255279792E-4 0.0 18-19 0.0 0.0 0.0 1.2143266255279792E-4 0.0 20-21 0.0 0.0 0.0 2.2262654801346283E-4 0.0 22-23 0.0 0.0 0.0 3.2382043347412774E-4 0.0 24-25 0.0 0.0 0.0 0.001113132740067314 0.0 26-27 0.0 0.0 0.0 0.0027524736845300863 0.0 28-29 0.0 0.0 0.0 0.010220582431527158 0.0 30-31 0.0 0.0 0.0 0.036733380422221365 4.047755418426597E-5 32-33 0.0 0.0 0.0 0.09206619699211295 4.047755418426597E-5 34-35 0.0 0.0 0.0 0.1754297198346087 8.095510836853194E-5 36-37 0.0 0.0 0.0 0.3110902426831761 8.095510836853194E-5 38-39 0.0 0.0 0.0 0.518659140540092 8.095510836853194E-5 40-41 0.0 0.0 0.0 0.7523562996229516 8.095510836853194E-5 42-43 0.0 0.0 0.0 0.9968812044501023 8.095510836853194E-5 44-45 0.0 4.047755418426597E-5 0.0 1.290404188617307 8.095510836853194E-5 46-47 0.0 4.047755418426597E-5 0.0 1.6560176967866895 8.095510836853194E-5 48-49 0.0 4.047755418426597E-5 0.0 2.040028253332821 1.0119388546066493E-4 50-51 0.0 4.047755418426597E-5 0.0 2.4501063547736193 1.2143266255279792E-4 52-53 0.0 4.047755418426597E-5 0.0 2.8595368153474694 1.2143266255279792E-4 54-55 0.0 4.047755418426597E-5 0.0 3.3084936075822555 1.2143266255279792E-4 56-57 0.0 4.047755418426597E-5 0.0 3.8477153456479547 1.2143266255279792E-4 58-59 0.0 4.047755418426597E-5 0.0 4.42551219285126 1.416714396449309E-4 60-61 0.0 4.047755418426597E-5 0.0 5.035286307860134 1.6191021673706387E-4 62-63 0.0 4.047755418426597E-5 0.0 5.6515368315384915 1.6191021673706387E-4 64-65 0.0 4.047755418426597E-5 0.0 6.316299703906692 1.6191021673706387E-4 66-67 0.0 4.047755418426597E-5 0.0 7.080293300357619 1.6191021673706387E-4 68-69 0.0 4.047755418426597E-5 0.0 7.902493619725522 1.6191021673706387E-4 70-71 0.0 4.047755418426597E-5 0.0 8.762439258370252 1.6191021673706387E-4 72-73 0.0 4.047755418426597E-5 0.0 9.631512585483534 1.8214899382919687E-4 74-75 0.0 4.047755418426597E-5 0.0 10.533210821269336 2.0238777092132984E-4 76-77 0.0 4.047755418426597E-5 0.0 11.514386734695943 2.0238777092132984E-4 78-79 0.0 4.047755418426597E-5 0.0 12.587466934897925 2.0238777092132984E-4 80-81 0.0 4.047755418426597E-5 0.0 13.692989894778599 2.0238777092132984E-4 82-83 0.0 4.047755418426597E-5 0.0 14.814602682447516 2.0238777092132984E-4 84-85 0.0 4.047755418426597E-5 0.0 15.950180226310005 2.2262654801346283E-4 86 0.0 4.047755418426597E-5 0.0 16.818545196225063 2.4286532510559583E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5095 0.0 42.18337 1 GGTATCA 2805 0.0 42.002556 1 TCAACGC 6260 0.0 34.2231 4 ATCAACG 6310 0.0 33.951916 3 CAACGCA 6430 0.0 33.318287 5 TATCAAC 6585 0.0 32.604355 2 AACGCAG 6700 0.0 32.381844 6 GTACATG 8335 0.0 27.221367 1 ACGCAGA 7970 0.0 26.182236 7 TACATGG 8600 0.0 25.925274 2 CGCAGAG 8170 0.0 25.090696 8 ACATGGG 8865 0.0 24.528803 3 CATGGGG 5640 0.0 21.96147 4 GCAGAGT 9080 0.0 21.515043 9 TAAGGCG 720 0.0 20.388922 5 GAGTACA 6205 0.0 18.987455 1 AGAGTAC 7755 0.0 18.27275 10-11 CAGAGTA 8490 0.0 17.528076 10-11 AGTACAT 6310 0.0 17.376171 2 GAGTACT 3810 0.0 17.337906 12-13 >>END_MODULE