##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920870_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2470505 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.08097048983912 31.0 30.0 34.0 26.0 34.0 2 30.09659482575425 31.0 30.0 34.0 26.0 34.0 3 30.23254597744186 31.0 30.0 34.0 26.0 34.0 4 33.87415649836774 35.0 35.0 37.0 30.0 37.0 5 33.37296585111141 35.0 33.0 37.0 27.0 37.0 6 33.31631872835716 35.0 33.0 37.0 27.0 37.0 7 33.1270298987454 35.0 33.0 37.0 26.0 37.0 8 33.05301264316405 35.0 33.0 37.0 26.0 37.0 9 34.3597697636718 37.0 34.0 39.0 27.0 39.0 10-11 34.156396769081624 37.0 33.5 39.0 26.0 39.0 12-13 33.97536799156448 37.0 33.0 39.0 25.0 39.0 14-15 34.83589630460169 38.0 33.5 40.0 25.0 41.0 16-17 34.70698379481118 38.0 33.0 40.0 25.0 41.0 18-19 34.615032958848495 38.0 33.5 40.0 25.0 41.0 20-21 34.50203278277114 38.0 33.0 40.0 24.0 41.0 22-23 34.347842647555865 38.0 33.0 40.0 23.5 41.0 24-25 34.15911605117172 38.0 33.0 40.0 22.0 41.0 26-27 33.967343923610755 38.0 33.0 40.0 21.0 41.0 28-29 33.906553518410206 38.0 32.5 40.0 20.5 41.0 30-31 33.87608950396781 38.0 33.0 40.0 20.0 41.0 32-33 33.70916047528744 38.0 32.5 40.0 19.0 41.0 34-35 33.52603617479018 38.0 32.0 40.0 18.0 41.0 36-37 33.324026666612696 38.0 32.0 40.0 17.0 41.0 38-39 33.126905835041825 38.0 32.0 40.0 16.0 41.0 40-41 32.8805982987284 37.5 31.0 40.0 15.0 41.0 42-43 32.891791759174744 38.0 31.5 40.0 14.5 41.0 44-45 32.73237273350995 37.5 31.0 40.0 11.0 41.0 46-47 32.46316036599805 37.0 31.0 40.0 9.0 41.0 48-49 32.19069542461966 37.0 31.0 40.0 8.0 41.0 50-51 31.918109050578728 37.0 30.0 40.0 7.0 41.0 52-53 31.645556272907765 36.0 30.0 40.0 3.5 41.0 54-55 31.354527920404937 36.0 30.0 39.0 2.0 41.0 56-57 31.018974663074957 35.5 29.0 39.0 2.0 40.5 58-59 30.67630707082155 35.0 29.0 39.0 2.0 40.0 60-61 30.33835470885507 35.0 28.0 39.0 2.0 40.0 62-63 30.005042086536964 35.0 28.0 38.5 2.0 40.0 64-65 29.592093721728958 34.0 28.0 38.0 2.0 40.0 66-67 29.150151284858765 34.0 27.0 37.5 2.0 40.0 68-69 28.70555109178083 34.0 26.0 37.0 2.0 39.0 70-71 28.278116012718048 34.0 26.0 36.0 2.0 39.0 72-73 27.84285075318609 33.0 26.0 36.0 2.0 39.0 74-75 27.405047551006778 33.0 25.0 35.5 2.0 38.0 76-77 25.98299295083394 30.5 23.0 34.0 2.0 36.0 78-79 26.82628389742178 32.5 25.0 35.0 2.0 37.0 80-81 26.86506503731019 33.0 25.0 35.0 2.0 36.5 82-83 26.534072183622378 33.0 24.5 35.0 2.0 36.0 84-85 26.217428218117348 32.5 24.0 35.0 2.0 36.0 86-87 25.680487390229935 32.0 21.5 35.0 2.0 35.0 88-89 25.322721063102485 32.0 20.0 34.5 2.0 35.0 90-91 24.962426912716225 32.0 18.5 34.0 2.0 35.0 92-93 24.652518412227458 32.0 17.5 34.0 2.0 35.0 94-95 24.27252201472978 31.5 9.5 34.0 2.0 35.0 96-97 23.737679138475738 31.0 2.0 34.0 2.0 35.0 98-99 23.132267491869072 31.0 2.0 34.0 2.0 35.0 100-101 20.976623605295273 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62469.0 3 28406.0 4 15134.0 5 10704.0 6 9320.0 7 9669.0 8 10738.0 9 12307.0 10 13916.0 11 15688.0 12 17058.0 13 18746.0 14 20340.0 15 21615.0 16 23246.0 17 24106.0 18 22855.0 19 21766.0 20 21756.0 21 22261.0 22 24534.0 23 27510.0 24 32339.0 25 37968.0 26 44202.0 27 52118.0 28 61523.0 29 72027.0 30 85379.0 31 100311.0 32 120363.0 33 146740.0 34 182939.0 35 233633.0 36 305605.0 37 344163.0 38 185616.0 39 11435.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.09225199095826 19.64144502327347 13.780943088481356 24.485359897286912 2 16.297194298331718 20.8664625248684 37.61510298501724 25.221240191782652 3 19.255292275455794 24.49336168186919 29.36138067949044 26.889965363184583 4 13.876396511499397 16.605314688485382 35.461038558837785 34.05725024117744 5 14.469384260591731 36.990916660695845 33.92203605404423 14.617663024668195 6 33.63310176040002 35.300467400487456 16.65558439243002 14.410846446682509 7 29.09412163852015 31.6871575590254 20.707846800465823 18.510874001988626 8 26.796791222793114 34.40162886699883 19.91564680107089 18.885933109137166 9 26.580709440986183 15.548464739742872 19.473125902650178 38.39769991662076 10-11 25.751533154989524 25.49031884072066 27.31505035750822 21.443097646781595 12-13 26.28018683525848 22.808481703164706 27.392319800886277 23.519011660690538 14-15 23.437589911877243 24.399054339800642 24.78593375029481 27.37742199802731 16-17 23.434972599907205 27.553077237296204 25.631516496255287 23.380433666541308 18-19 23.54377215708284 26.49457961014674 27.153901884695163 22.807746348075252 20-21 24.261582146816014 25.79969326861267 26.849200524379068 23.089524060192236 22-23 24.02915492524108 25.68609356086447 26.698725687349402 23.586025826545047 24-25 23.753003079624744 25.833491283576578 26.795550015147025 23.617955621651657 26-27 23.45840551398769 25.966079919122564 26.839902937356037 23.73561162953371 28-29 23.57189656024173 26.050562575773405 26.83079074837601 23.546750115608855 30-31 23.75680922076137 25.909200133041583 26.565217400105958 23.768773246091094 32-33 23.60179437417779 25.94434832464746 26.54832391863204 23.90553338254271 34-35 23.883599856440068 25.988437069150667 26.5152485872241 23.612714487185173 36-37 23.980962734208067 25.695855183980683 26.443458571577512 23.879723510233745 38-39 23.811115475096265 25.728951982216536 26.554271554150084 23.905660988537118 40-41 23.86255906421194 25.710668412233733 26.66685021168071 23.759922311873616 42-43 23.89563061596931 25.559451345403673 26.53259589958335 24.01232213904367 44-45 23.718139090266984 25.62369514180277 26.626648147372123 24.03151762055812 46-47 23.787335623647724 25.634562111500074 26.45396125928285 24.124141005569356 48-49 23.630844226620308 25.766584942135346 26.301805394952538 24.300765436291805 50-51 23.557907474269115 25.779163037478327 26.42675935257777 24.236170135674797 52-53 23.70756029158881 25.629349624827146 26.523198538817518 24.139891544766527 54-55 23.50746789792675 25.59626087940421 26.563123366406817 24.33314785626222 56-57 23.38293766248749 25.728869921965526 26.394880145078748 24.493312270468238 58-59 23.236456575875234 25.622990223540576 26.469160759448577 24.671392441135612 60-61 23.202107898627826 25.629324989837844 26.539182201406668 24.629384910127662 62-63 23.083563605803757 25.616756441219596 26.58331383472684 24.716366118249805 64-65 23.021717134610125 25.595279659948332 26.394848786427566 24.988154419013973 66-67 22.889114707059637 25.65612967767055 26.328826215910382 25.125929399359435 68-69 23.14319519819051 25.423694136840876 26.293476188961762 25.139634476006854 70-71 22.87736512686244 25.215118269248094 26.391444297996923 25.51607230589254 72-73 22.772651703989 25.19525053194925 26.3537852777667 25.678312486295056 74-75 22.731728086698148 25.30310300914368 26.25182479607961 25.713344108078566 76-77 22.727202647282688 25.049376885612784 26.526626191415158 25.69679427568937 78-79 22.615421728818866 25.131601947479943 26.34570827460221 25.907268049098985 80-81 22.57011931852455 25.04140502187958 26.406485376568096 25.981990283027766 82-83 22.426145092633636 24.891841398420787 26.472331355772678 26.209682153172903 84-85 22.291272087573635 24.802166468200593 26.421350051038473 26.485211393187303 86-87 22.314179040730476 24.781998494071548 26.466621528040562 26.437200937157414 88-89 22.176709620824553 24.7046205924204 26.280988773709158 26.837681013045888 90-91 21.898770317740123 24.645126309323764 26.432375186712882 27.023728186223234 92-93 21.970676599954384 24.460836093238104 26.456294461512403 27.11219284529511 94-95 21.723682761836606 24.30260290341279 26.594634547568237 27.37907978718237 96-97 21.845862394196867 24.070146818923327 26.603046482539195 27.48094430434061 98-99 21.64166311294598 24.154236402742775 26.512463186860675 27.691637297450573 100-101 21.735937821623548 23.86575487582561 26.634765996195313 27.763541306355528 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 127.0 1 93.5 2 100.5 3 139.5 4 127.0 5 138.5 6 221.5 7 426.5 8 661.0 9 718.5 10 567.5 11 448.5 12 461.5 13 482.0 14 539.0 15 605.5 16 666.0 17 750.0 18 801.0 19 879.0 20 1007.5 21 1209.0 22 1445.0 23 1700.5 24 2031.0 25 2474.0 26 3223.0 27 4294.5 28 5649.0 29 7675.0 30 10634.5 31 14973.0 32 20364.0 33 24683.0 34 28508.0 35 34077.0 36 40963.0 37 47152.5 38 53114.0 39 59092.0 40 64968.0 41 71293.5 42 76976.5 43 83197.5 44 88983.5 45 94268.0 46 100138.0 47 104657.0 48 107910.5 49 109724.5 50 110209.5 51 110542.5 52 110049.5 53 108797.0 54 105475.5 55 99568.5 56 91972.0 57 82119.0 58 73337.0 59 64497.0 60 53644.5 61 43671.5 62 35106.0 63 27100.0 64 20163.0 65 15103.5 66 11547.5 67 8841.5 68 6458.0 69 4640.0 70 3355.0 71 2431.5 72 1880.0 73 1512.0 74 1121.5 75 811.0 76 543.5 77 322.5 78 183.5 79 91.0 80 53.0 81 32.0 82 20.0 83 13.0 84 3.5 85 2.5 86 3.0 87 1.0 88 1.0 89 1.5 90 1.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18648009212691333 2 0.0 3 0.012183743809464057 4 0.013438547989176302 5 0.006395453561114023 6 0.10524164087909152 7 0.14061902323613998 8 0.12236364629903602 9 0.14021424769429733 10-11 0.11331691293885257 12-13 0.11210258631332459 14-15 0.11378240481197165 16-17 0.0658367418807086 18-19 0.07729188971485587 20-21 0.03713815596406402 22-23 0.08245277787334979 24-25 0.055575681894997175 26-27 0.06411644582787729 28-29 0.039303705112922256 30-31 0.024306771287651713 32-33 0.031815357588833054 34-35 0.018478003485117415 36-37 0.024792501937862903 38-39 0.032179655576491446 40-41 0.02548062035899543 42-43 0.012831384676412313 44-45 0.026249693888496482 46-47 0.033576131195848624 48-49 0.00868243537252505 50-51 0.014996933825270543 52-53 0.007164527090615077 54-55 0.012082549924003393 56-57 0.004958500387572581 58-59 0.0032786818889255437 60-61 0.022545997680636146 62-63 0.00983604566677663 64-65 0.0070633332051544115 66-67 0.03912155611909306 68-69 0.08846369466971328 70-71 0.021311432278016032 72-73 0.042481193116387136 74-75 0.08413259637199681 76-77 0.23432456117271572 78-79 0.08020627361612301 80-81 0.015948156348600792 82-83 0.011738490713437131 84-85 0.012527803020030318 86-87 0.25276208710364884 88-89 0.6079323862934906 90-91 0.2628814756497153 92-93 0.3486938905203592 94-95 0.001335759288080777 96-97 0.0046549187311905865 98-99 0.003622741099491804 100-101 0.005201365712678177 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2470505.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.45592902623456 #Duplication Level Percentage of deduplicated Percentage of total 1 72.40208809165405 37.97918794286987 2 12.75671328208476 13.383304930661241 3 5.6001822332655475 8.81288285286472 4 2.975923695804167 6.244193686983721 5 1.783769959887953 4.678465520750586 6 1.149672336110903 3.618427827987529 7 0.760735201772762 2.7933550226365162 8 0.5112230115242083 2.145334240727341 9 0.3809345890636934 1.7984049990806632 >10 1.5973707552555858 13.671969404987227 >50 0.05951226661903055 2.124788196154892 >100 0.02009446031966621 1.859999155060978 >500 0.0011609456332377951 0.412282721381883 >1k 6.1917100438783E-4 0.47740349785284797 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.047755418426597E-5 0.0 5 0.0 0.0 0.0 4.047755418426597E-5 0.0 6 0.0 0.0 0.0 4.047755418426597E-5 0.0 7 0.0 0.0 0.0 8.095510836853194E-5 0.0 8 0.0 0.0 0.0 8.095510836853194E-5 0.0 9 0.0 0.0 0.0 8.095510836853194E-5 0.0 10-11 0.0 0.0 0.0 1.2143266255279792E-4 0.0 12-13 0.0 0.0 0.0 1.2143266255279792E-4 6.071633127639895E-5 14-15 0.0 0.0 0.0 1.2143266255279792E-4 1.0119388546066493E-4 16-17 0.0 0.0 0.0 1.2143266255279792E-4 1.2143266255279792E-4 18-19 0.0 0.0 0.0 1.2143266255279792E-4 1.2143266255279792E-4 20-21 0.0 0.0 0.0 2.428653251055958E-4 1.2143266255279792E-4 22-23 0.0 4.047755418426597E-5 0.0 3.6429798765839373E-4 1.2143266255279792E-4 24-25 0.0 4.047755418426597E-5 0.0 0.001092893962975181 1.2143266255279792E-4 26-27 0.0 4.047755418426597E-5 0.0 0.0028131900158064847 1.6191021673706387E-4 28-29 0.0 4.047755418426597E-5 0.0 0.010159866100250759 1.6191021673706387E-4 30-31 0.0 4.047755418426597E-5 0.0 0.03679409675349776 1.6191021673706387E-4 32-33 0.0 8.095510836853194E-5 0.0 0.09210667454629722 1.6191021673706387E-4 34-35 2.0238777092132984E-5 8.095510836853194E-5 0.0 0.17565234638262217 1.6191021673706387E-4 36-37 4.047755418426597E-5 8.095510836853194E-5 0.0 0.31074618347260985 1.6191021673706387E-4 38-39 4.047755418426597E-5 8.095510836853194E-5 0.0 0.5193067814070402 2.0238777092132984E-4 40-41 4.047755418426597E-5 8.095510836853194E-5 0.0 0.7515669873163584 2.0238777092132984E-4 42-43 4.047755418426597E-5 8.095510836853194E-5 0.0 0.9964764289082597 2.0238777092132984E-4 44-45 4.047755418426597E-5 8.095510836853194E-5 0.0 1.2902018008463858 2.0238777092132984E-4 46-47 4.047755418426597E-5 8.095510836853194E-5 0.0 1.6556736375761232 2.0238777092132984E-4 48-49 4.047755418426597E-5 8.095510836853194E-5 0.0 2.0366281387813423 2.0238777092132984E-4 50-51 4.047755418426597E-5 8.095510836853194E-5 0.0 2.4401083988901053 2.0238777092132984E-4 52-53 4.047755418426597E-5 8.095510836853194E-5 0.0 2.8414231098500102 2.4286532510559583E-4 54-55 4.047755418426597E-5 8.095510836853194E-5 0.0 3.284166597517512 2.4286532510559583E-4 56-57 4.047755418426597E-5 8.095510836853194E-5 0.0 3.8168309718053597 2.4286532510559583E-4 58-59 4.047755418426597E-5 8.095510836853194E-5 0.0 4.387787112351523 2.4286532510559583E-4 60-61 4.047755418426597E-5 8.095510836853194E-5 0.0 4.992622965749917 2.631041021977288E-4 62-63 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 5.6021946929878705 3.2382043347412774E-4 64-65 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 6.2556238501844765 3.2382043347412774E-4 66-67 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 7.006543196633887 3.2382043347412774E-4 68-69 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 7.8178550539262215 3.2382043347412774E-4 70-71 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 8.66213587910164 3.2382043347412774E-4 72-73 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 9.518802835857446 3.4405921056626074E-4 74-75 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 10.416392599893545 3.6429798765839373E-4 76-77 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 11.391517118969603 3.6429798765839373E-4 78-79 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 12.458991177917067 3.6429798765839373E-4 80-81 4.047755418426597E-5 8.095510836853194E-5 4.047755418426597E-5 13.553666153276355 3.6429798765839373E-4 82-83 6.071633127639895E-5 8.095510836853194E-5 4.047755418426597E-5 14.66463334419481 4.047755418426597E-4 84-85 8.095510836853194E-5 8.095510836853194E-5 4.047755418426597E-5 15.792843973195763 4.047755418426597E-4 86-87 8.095510836853194E-5 8.095510836853194E-5 4.047755418426597E-5 16.9532544965503 4.047755418426597E-4 88-89 8.095510836853194E-5 8.095510836853194E-5 4.047755418426597E-5 18.169827626335504 4.047755418426597E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2780 0.0 47.554787 1 GTATCAA 5045 0.0 42.323284 1 ATCAACG 6545 0.0 32.199417 3 TCAACGC 6565 0.0 32.029026 4 TATCAAC 6665 0.0 31.689613 2 CAACGCA 6685 0.0 31.166912 5 AACGCAG 6770 0.0 30.91581 6 GTACATG 8110 0.0 26.093563 1 ACGCAGA 8140 0.0 25.071178 7 TACATGG 8365 0.0 24.22808 2 CGCAGAG 8445 0.0 23.88471 8 ACATGGG 8570 0.0 22.984865 3 TAAGGCG 750 0.0 20.882544 5 GCAGAGT 9220 0.0 20.589745 9 CATGGGG 5605 0.0 19.307852 4 GTGGTAT 1695 0.0 19.078024 1 AGAGTAC 7920 0.0 18.334713 10-11 CAGAGTA 8420 0.0 17.725008 10-11 TAATACT 1435 0.0 17.19991 4 TAAGGTG 1060 0.0 17.014078 5 >>END_MODULE