##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920869_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2055597 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.29912623923853 31.0 30.0 34.0 27.0 34.0 2 30.314848192520227 31.0 30.0 34.0 26.0 34.0 3 30.447159146466937 31.0 30.0 34.0 27.0 34.0 4 34.09863363295432 35.0 35.0 37.0 30.0 37.0 5 33.638908793892966 35.0 35.0 37.0 28.0 37.0 6 33.58570138018298 35.0 35.0 37.0 28.0 37.0 7 33.40885154045272 35.0 35.0 37.0 28.0 37.0 8 33.343136324873015 35.0 33.0 37.0 27.0 37.0 9 34.68204030264687 38.0 35.0 39.0 27.0 39.0 10-11 34.48216284612208 37.5 34.0 39.0 27.0 39.0 12-13 34.31228008213672 37.0 34.0 39.0 27.0 39.0 14-15 35.204363987688254 38.0 34.0 40.0 27.0 41.0 16-17 35.08102171777834 38.0 34.0 40.0 26.0 41.0 18-19 34.99060394620152 38.0 34.0 40.0 25.5 41.0 20-21 34.881361473090294 38.0 34.0 40.0 25.0 41.0 22-23 34.73325486464516 38.0 34.0 40.0 25.0 41.0 24-25 34.55461406102461 38.0 33.0 40.0 24.0 41.0 26-27 34.37508008622313 38.0 33.0 40.0 24.0 41.0 28-29 34.30881734114226 38.0 33.0 40.0 23.5 41.0 30-31 34.29671769320542 38.0 33.0 40.0 23.5 41.0 32-33 34.14854468069373 38.0 33.0 40.0 23.0 41.0 34-35 33.97636112525947 38.0 33.0 40.0 22.0 41.0 36-37 33.78478612296087 38.0 33.0 40.0 20.5 41.0 38-39 33.600399056819015 38.0 32.5 40.0 19.0 41.0 40-41 33.36863329728541 38.0 32.0 40.0 18.0 41.0 42-43 33.3936192259475 38.0 32.0 40.0 18.0 41.0 44-45 33.2426419186251 38.0 32.0 40.0 15.5 41.0 46-47 32.984434448970305 38.0 32.0 40.0 15.0 41.0 48-49 32.7123614210373 37.0 31.0 40.0 12.5 41.0 50-51 32.44782197094081 37.0 31.0 40.0 9.0 41.0 52-53 32.18477040976417 37.0 31.0 40.0 8.0 41.0 54-55 31.889547416152098 36.0 30.5 40.0 7.5 41.0 56-57 31.560120247305285 36.0 30.0 39.0 4.5 41.0 58-59 31.216969328131924 35.5 29.5 39.0 2.0 40.0 60-61 30.877343418967826 35.0 29.0 39.0 2.0 40.0 62-63 30.549152873836654 35.0 29.0 39.0 2.0 40.0 64-65 30.127342324395297 35.0 28.0 38.0 2.0 40.0 66-67 29.67958651428271 34.0 28.0 38.0 2.0 40.0 68-69 29.229362564743965 34.0 28.0 37.0 2.0 39.5 70-71 28.7970010658704 34.0 26.5 36.5 2.0 39.0 72-73 28.35659226978829 34.0 26.0 36.0 2.0 39.0 74-75 27.91571353723517 33.0 26.0 35.5 2.0 38.5 76-77 26.47039229965796 31.5 24.5 34.0 2.0 36.0 78-79 27.313589190877394 33.0 26.0 35.0 2.0 37.0 80-81 27.34233655721428 33.0 26.0 35.0 2.0 36.5 82-83 27.012674663370298 33.0 25.5 35.0 2.0 36.0 84-85 26.700262502815484 33.0 25.0 35.0 2.0 36.0 86-87 26.162397833816648 32.0 24.0 35.0 2.0 35.0 88-89 25.803875467808133 32.0 22.5 35.0 2.0 35.0 90-91 25.438863989390917 32.0 20.5 34.5 2.0 35.0 92-93 25.12913936924407 32.0 19.5 34.0 2.0 35.0 94-95 24.760488802036583 32.0 17.5 34.0 2.0 35.0 96-97 24.226738023065806 31.5 6.0 34.0 2.0 35.0 98-99 23.62715746325763 31.0 2.0 34.0 2.0 35.0 100-101 21.42084635266543 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 44722.0 3 20630.0 4 11351.0 5 8041.0 6 6924.0 7 6950.0 8 7887.0 9 9290.0 10 10513.0 11 11977.0 12 13302.0 13 14415.0 14 15800.0 15 16879.0 16 18214.0 17 19115.0 18 18455.0 19 17260.0 20 17174.0 21 17739.0 22 19594.0 23 22217.0 24 25566.0 25 30431.0 26 35757.0 27 42687.0 28 49917.0 29 58854.0 30 69323.0 31 82340.0 32 98500.0 33 120606.0 34 151817.0 35 196124.0 36 261906.0 37 303725.0 38 167951.0 39 11643.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.29035984266935 19.261744966442954 13.747032991670444 24.700862199217248 2 16.035828034386117 20.688831517072657 38.07925386153025 25.196086587010974 3 19.21341311818216 24.53607906348325 29.251649710196897 26.998858108137696 4 13.801065909482352 16.603822055198812 35.73920345792946 33.85590857738937 5 14.510771206725437 36.95944499581606 34.026942611944655 14.502841185513846 6 33.481408470183524 35.477403526337476 16.780003720546084 14.26118428293292 7 29.165499512109093 31.56880674502476 20.720772947801276 18.544920795064872 8 26.87079385845495 34.54855318715756 19.827149104841023 18.753503849546465 9 26.844971262827965 15.582523278619526 19.316553176190677 38.25595228236184 10-11 25.72760578436828 25.395164108377156 27.50640739203012 21.37082271522445 12-13 26.33298916854983 22.616301722122653 27.494667069274527 23.556042040052986 14-15 23.51098598573613 24.308461377551804 24.833512279070604 27.34704035764146 16-17 23.577865043887 27.446838339776065 25.52979112115207 23.445505495184868 18-19 23.698801005466972 26.472890805176895 26.965473222358057 22.862834966998076 20-21 24.47868774115338 25.772293053687672 26.620826892235083 23.12819231292386 22-23 24.209997412242018 25.581143983779164 26.520380845916907 23.688477758061914 24-25 23.821924479433495 25.89576963430807 26.556661598733072 23.725644287525363 26-27 23.76561051412805 25.991127237996857 26.63637034082028 23.606891907054813 28-29 23.731488993284476 25.974928837044743 26.627476955077185 23.666105214593603 30-31 24.04083882900273 25.946363758896755 26.39166990656916 23.62112750553135 32-33 23.70991543600156 26.066563582369913 26.29214057259231 23.93138040903622 34-35 23.965369633617904 26.011822261731943 26.45238969331554 23.570418411334618 36-37 24.13912822606427 25.74058548087998 26.317346577801437 23.80293971525432 38-39 23.943073902221226 25.726454965947994 26.43168065325349 23.898790478577286 40-41 23.992667932471797 25.69666319884073 26.502932729691565 23.807736138995914 42-43 24.042186837850608 25.536591880731734 26.42138767781182 23.99983360360584 44-45 23.860761818888278 25.71155170740051 26.418876061795505 24.00881041191571 46-47 24.003225456384072 25.569674091672457 26.297056357404703 24.130044094538768 48-49 23.738184850531184 25.641039363397706 26.334087764399545 24.28668802167157 50-51 23.587922512691105 25.834333400558613 26.351124677263932 24.226619409486354 52-53 23.815878549725035 25.6845857019249 26.340862634784408 24.15867311356566 54-55 23.693457263684785 25.574598559465358 26.342400411025285 24.38954376582457 56-57 23.665144722535068 25.730934548293956 26.139037745349636 24.464882983821337 58-59 23.440759515840274 25.5751585973379 26.405556744765313 24.578525142056513 60-61 23.47804825236329 25.659975694997765 26.357035373631625 24.504940679007316 62-63 23.29598253946476 25.74584820894259 26.27623726633252 24.68193198526013 64-65 23.30299367462267 25.631193745604676 26.24456293158118 24.82124964819148 66-67 23.22415222087737 25.725477198940403 26.075300608200212 24.975069971982006 68-69 23.38400098160656 25.478289745327633 26.130673452216797 25.007035820849012 70-71 23.209775261818255 25.198854388518193 26.257075527930606 25.334294821732943 72-73 23.12089763659579 25.270522067986594 26.181781193171023 25.4267991022466 74-75 23.08747349824612 25.348786086387502 26.022561759524137 25.541178655842238 76-77 22.968634682298244 25.130533390581505 26.397795311452732 25.50303661566752 78-79 22.973944393121133 25.254598101970693 26.169848914725 25.60160859018317 80-81 22.90341360122437 25.204262129892346 26.09380743637008 25.7985168325132 82-83 22.71127248807634 25.15083680919271 26.245872391645868 25.892018311085074 84-85 22.598061765915794 25.068401607629355 26.211870680274572 26.121665946180272 86-87 22.526677425915548 25.0668795105566 26.33082300450318 26.075620059024672 88-89 22.557731291086718 24.893417460395938 26.229462453917034 26.319388794600307 90-91 22.442077444049314 24.855341469737986 26.270769550455555 26.43181153575715 92-93 22.431406282877408 24.77268056059354 26.26433546564053 26.531577690888525 94-95 22.20075482639382 24.685634947352852 26.40194554119243 26.7116646850609 96-97 22.165404608599832 24.584007336396652 26.449826198428124 26.800761856575388 98-99 22.09612860932291 24.55272430069654 26.357151631393887 26.993995458586667 100-101 22.21590851042403 24.42460219966908 26.375863479820637 26.983625810086252 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 135.0 1 88.5 2 77.0 3 110.5 4 90.5 5 91.0 6 147.5 7 291.5 8 456.5 9 480.0 10 408.5 11 352.0 12 361.0 13 404.0 14 440.5 15 495.5 16 556.5 17 593.5 18 646.0 19 729.5 20 816.5 21 944.0 22 1107.0 23 1318.0 24 1579.5 25 1998.0 26 2633.0 27 3443.0 28 4695.5 29 6565.0 30 8995.0 31 12183.5 32 15954.5 33 19577.0 34 23283.0 35 28012.0 36 34617.0 37 40748.0 38 45716.5 39 50445.5 40 54949.5 41 59553.5 42 63079.5 43 67585.0 44 73307.0 45 77808.0 46 81615.5 47 85607.5 48 89049.0 49 91543.5 50 92102.0 51 90991.0 52 88932.0 53 87705.0 54 86565.5 55 82805.0 56 77093.0 57 69859.5 58 62769.0 59 55757.0 60 47250.5 61 38550.5 62 30814.5 63 23468.5 64 17233.0 65 12790.5 66 9639.5 67 7284.5 68 5351.5 69 3685.0 70 2582.5 71 1919.5 72 1395.5 73 1066.5 74 828.0 75 613.0 76 448.5 77 271.5 78 110.0 79 43.0 80 19.5 81 10.0 82 7.5 83 5.0 84 2.0 85 1.0 86 1.0 87 1.5 88 2.0 89 2.0 90 0.5 91 1.0 92 1.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18812053140766405 2 0.0 3 0.01148084960232964 4 0.012794336633104642 5 0.005691777133358338 6 0.10386277076683806 7 0.1402998739538927 8 0.12152187418059085 9 0.13888909158750476 10-11 0.11210855046003666 12-13 0.1127166463076177 14-15 0.115173353531845 16-17 0.06538246553191117 18-19 0.07910110785333896 20-21 0.036899256031216236 22-23 0.08248212076588941 24-25 0.057233981174325516 26-27 0.06482301735213664 28-29 0.03921002025202411 30-31 0.02403194789640187 32-33 0.031353421901277344 34-35 0.01977527696333474 36-37 0.024323833903240763 38-39 0.03171827940982595 40-41 0.025053548920337988 42-43 0.012842984300911122 44-45 0.025710292435725486 46-47 0.03376148145769818 48-49 0.008999818544199081 50-51 0.015494282196364364 52-53 0.006737701991197691 54-55 0.012113269283813899 56-57 0.005448538794325931 58-59 0.0037458704210990776 60-61 0.02259684169611067 62-63 0.010653839249619454 64-65 0.0071268833336495425 66-67 0.04115592696428337 68-69 0.08858740307560285 70-71 0.021891450512916685 72-73 0.04439099687341439 74-75 0.08384425546447091 76-77 0.23723035205830714 78-79 0.07902813635162924 80-81 0.01622399721346159 82-83 0.01118896359549075 84-85 0.013256489477266216 86-87 0.25627591400454464 88-89 0.6233712152722543 90-91 0.26807297344761644 92-93 0.3535712496175077 94-95 0.001216191695162038 96-97 0.0044755854381963 98-99 0.003381012912550466 100-101 0.005156652787487042 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2055597.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.046892303521 #Duplication Level Percentage of deduplicated Percentage of total 1 70.35665962479315 35.21132167077507 2 13.10630215293289 13.118593846904755 3 5.980573722551432 8.979273870173975 4 3.254869267702556 6.515843668110002 5 1.969022714435383 4.927173386626708 6 1.2678544199939155 3.8071304168387137 7 0.9038003735249742 3.1662679970380503 8 0.6237895915179638 2.4974984405405505 9 0.48079386315311057 2.1656014820475784 >10 1.9875732738673908 16.196980759824264 >50 0.050682700113472444 1.6994355477240974 >100 0.01749247221907215 1.3677463302662891 >500 1.95274398219115E-4 0.07622843886299398 >1k 3.9054879643823E-4 0.2709041442669478 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 9.729533561296305E-5 0.0 22-23 0.0 0.0 0.0 5.837720136777783E-4 0.0 24-25 0.0 0.0 0.0 0.0017513160410333349 0.0 26-27 0.0 0.0 0.0 0.0033080414108407436 0.0 28-29 0.0 0.0 0.0 0.009145761547618526 0.0 30-31 0.0 0.0 0.0 0.033129061776213914 0.0 32-33 0.0 0.0 4.8647667806481524E-5 0.08172808191488895 0.0 34-35 0.0 0.0 4.8647667806481524E-5 0.1536050110989654 0.0 36-37 0.0 0.0 4.8647667806481524E-5 0.26787838277639053 0.0 38-39 0.0 0.0 4.8647667806481524E-5 0.4475828676535333 0.0 40-41 0.0 0.0 4.8647667806481524E-5 0.6512706527592713 0.0 42-43 0.0 0.0 4.8647667806481524E-5 0.8635204273989503 0.0 44-45 0.0 0.0 4.8647667806481524E-5 1.1188720357151718 0.0 46-47 0.0 0.0 4.8647667806481524E-5 1.4259361149096832 2.4323833903240762E-5 48-49 0.0 0.0 4.8647667806481524E-5 1.753043033240465 4.8647667806481524E-5 50-51 0.0 0.0 4.8647667806481524E-5 2.0950847855878365 4.8647667806481524E-5 52-53 0.0 0.0 4.8647667806481524E-5 2.4413345612004687 4.8647667806481524E-5 54-55 0.0 0.0 4.8647667806481524E-5 2.832315867361161 4.8647667806481524E-5 56-57 0.0 0.0 4.8647667806481524E-5 3.292936309986831 4.8647667806481524E-5 58-59 0.0 0.0 4.8647667806481524E-5 3.7822832004522287 4.8647667806481524E-5 60-61 0.0 0.0 4.8647667806481524E-5 4.299067375560482 4.8647667806481524E-5 62-63 0.0 0.0 4.8647667806481524E-5 4.817043418529995 4.8647667806481524E-5 64-65 0.0 0.0 4.8647667806481524E-5 5.371480888520464 4.8647667806481524E-5 66-67 0.0 0.0 4.8647667806481524E-5 6.0032681503232395 4.8647667806481524E-5 68-69 0.0 0.0 4.8647667806481524E-5 6.706153978625188 4.8647667806481524E-5 70-71 0.0 0.0 4.8647667806481524E-5 7.456179397031617 4.8647667806481524E-5 72-73 0.0 0.0 4.8647667806481524E-5 8.20121842948788 4.8647667806481524E-5 74-75 0.0 0.0 4.8647667806481524E-5 8.96445168970377 4.8647667806481524E-5 76-77 2.4323833903240762E-5 0.0 4.8647667806481524E-5 9.791826899922505 4.8647667806481524E-5 78-79 4.8647667806481524E-5 0.0 4.8647667806481524E-5 10.701903145412256 4.8647667806481524E-5 80-81 4.8647667806481524E-5 0.0 4.8647667806481524E-5 11.64231121177935 4.8647667806481524E-5 82-83 4.8647667806481524E-5 0.0 4.8647667806481524E-5 12.59835950334623 4.8647667806481524E-5 84-85 4.8647667806481524E-5 0.0 4.8647667806481524E-5 13.560975230066983 4.8647667806481524E-5 86-87 4.8647667806481524E-5 0.0 4.8647667806481524E-5 14.5518309279494 4.8647667806481524E-5 88-89 4.8647667806481524E-5 0.0 4.8647667806481524E-5 15.614393288178569 9.729533561296305E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2615 0.0 43.09506 1 GTATCAA 4310 0.0 36.407223 1 TCAACGC 5440 0.0 28.53302 4 ATCAACG 5585 0.0 27.877226 3 CAACGCA 5610 0.0 27.411873 5 TATCAAC 5705 0.0 27.372055 2 AACGCAG 5855 0.0 26.345898 6 GTACATG 7545 0.0 25.523876 1 TACATGG 7880 0.0 24.033321 2 ACATGGG 7730 0.0 23.764593 3 TCGCGTA 165 2.4499532E-6 23.010195 9 ACGCAGA 6775 0.0 22.20731 7 CGCAGAG 7010 0.0 21.461273 8 CATGGGG 5035 0.0 19.326504 4 GCAGAGT 7950 0.0 18.326752 9 AGAGTAC 6330 0.0 18.10489 10-11 GAGTACA 5450 0.0 17.536802 1 GTATATA 710 0.0 16.742971 1 CGTAGAC 230 4.2984662E-5 16.510532 3 CAGAGTA 7120 0.0 16.362665 10-11 >>END_MODULE