##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920868_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3505137 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.03637889189495 31.0 30.0 33.0 24.0 34.0 2 29.08521321705828 31.0 30.0 34.0 23.0 34.0 3 29.161496968592097 31.0 30.0 34.0 23.0 34.0 4 32.67710534566837 35.0 33.0 37.0 26.0 37.0 5 32.65407029739494 35.0 33.0 37.0 26.0 37.0 6 32.776954795204865 35.0 33.0 37.0 26.0 37.0 7 32.62790099217234 35.0 33.0 37.0 25.0 37.0 8 32.576336959154524 35.0 33.0 37.0 25.0 37.0 9 33.8874329305816 37.0 33.0 39.0 25.0 39.0 10-11 33.71265103189975 37.0 33.0 39.0 25.0 39.0 12-13 33.554662200079484 37.0 33.0 39.0 23.0 39.0 14-15 34.36726538791494 38.0 33.0 40.0 23.0 41.0 16-17 34.26701010545379 38.0 33.0 40.0 22.5 41.0 18-19 34.162158141037 38.0 33.0 40.0 21.5 41.0 20-21 34.082830000653324 38.0 33.0 40.0 19.0 41.0 22-23 33.87516821739065 38.0 33.0 40.0 18.5 41.0 24-25 33.69322269001184 38.0 32.0 40.0 18.0 41.0 26-27 33.74290163266086 38.0 33.0 40.0 18.0 41.0 28-29 33.59743813151954 38.0 32.5 40.0 17.5 41.0 30-31 33.36454238450594 38.0 32.0 40.0 16.0 41.0 32-33 33.137511743478214 38.0 32.0 40.0 15.5 41.0 34-35 32.81874445991697 38.0 31.5 40.0 12.0 41.0 36-37 32.53001794223735 37.5 31.0 40.0 9.0 41.0 38-39 32.34071835137971 37.0 31.0 40.0 8.5 41.0 40-41 32.152149545081976 37.0 30.0 40.0 8.0 41.0 42-43 31.930296447756536 37.0 30.0 40.0 7.5 41.0 44-45 31.672069451208326 37.0 30.0 40.0 2.0 41.0 46-47 31.43063067149729 37.0 30.0 40.0 2.0 41.0 48-49 31.140601636968825 36.0 29.5 39.5 2.0 40.5 50-51 29.978767449032663 34.5 27.5 38.0 2.0 39.5 52-53 30.43634528407877 35.5 28.5 38.5 2.0 39.5 54-55 31.115653682010148 36.0 30.0 39.0 2.0 40.5 56-57 31.082199069537083 36.0 30.0 39.5 2.0 41.0 58-59 30.85429713588941 36.0 29.0 39.0 2.0 41.0 60-61 30.53928348592366 35.5 29.0 39.0 2.0 40.5 62-63 30.16218082203349 35.0 28.0 39.0 2.0 40.0 64-65 29.750341142157925 35.0 28.0 38.5 2.0 40.0 66-67 29.37247944944805 34.5 28.0 38.0 2.0 40.0 68-69 28.933671066209392 34.0 27.0 37.5 2.0 40.0 70-71 28.611276249687243 34.0 26.0 37.0 2.0 39.5 72-73 28.14330666675796 34.0 26.0 36.0 2.0 39.0 74-75 27.699748968442606 34.0 26.0 36.0 2.0 39.0 76-77 27.28116433109462 33.0 25.5 35.5 2.0 38.0 78-79 26.823151420329648 33.0 24.5 35.0 2.0 37.0 80-81 26.377102521242392 33.0 23.5 35.0 2.0 37.0 82-83 25.902598243663515 32.0 21.5 35.0 2.0 36.0 84-85 25.509679507534226 32.0 20.0 35.0 2.0 36.0 86-87 25.064742262570622 32.0 18.5 35.0 2.0 35.0 88-89 24.544167888444875 31.5 14.0 34.0 2.0 35.0 90-91 24.063558143376422 31.0 4.5 34.0 2.0 35.0 92-93 23.53665106385285 31.0 2.0 34.0 2.0 35.0 94-95 22.912394294431287 31.0 2.0 34.0 2.0 35.0 96-97 22.28329848448149 30.0 2.0 34.0 2.0 35.0 98 21.895515353608147 30.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 149678.0 3 25827.0 4 18878.0 5 15766.0 6 14636.0 7 14532.0 8 17082.0 9 19493.0 10 21340.0 11 23382.0 12 24769.0 13 24970.0 14 23628.0 15 24575.0 16 26762.0 17 28842.0 18 29713.0 19 29160.0 20 30274.0 21 31852.0 22 35354.0 23 39983.0 24 45504.0 25 52622.0 26 60932.0 27 71398.0 28 83023.0 29 97525.0 30 113383.0 31 135054.0 32 162856.0 33 199475.0 34 251152.0 35 321811.0 36 416849.0 37 479081.0 38 308587.0 39 35386.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.2627645256436 17.912889092523123 12.83920849918387 24.985137882649408 2 16.13584772134181 19.571677037066628 39.089107441719115 25.203367799872446 3 19.44278864769899 23.28025811215963 28.87365841228607 28.40329482785532 4 13.325604441478184 15.362955933046834 36.155634353602224 35.15580527187276 5 14.602343271362969 36.674716507767194 34.02802805716329 14.694912163706544 6 34.129331796182996 34.52883869053054 17.104516710802667 14.237312802483792 7 29.93635607499169 31.098810011256457 20.632187761705502 18.33264615204635 8 26.810929287292097 34.43859922427671 19.82902017713699 18.92145131129421 9 26.89392739855817 15.677161834187936 19.38608961646863 38.04282115078526 10-11 25.90836703625765 25.218579250562602 27.357697390343773 21.515356322835977 12-13 26.451924810725803 22.46405673318558 27.398466976018042 23.685551480070576 14-15 23.504469558727365 24.060268572948015 24.945093413948584 27.490168454376036 16-17 23.897385463154595 27.145299408663536 25.475913724107276 23.48140140407459 18-19 23.734232985294703 26.365977538858065 26.91505558063098 22.98473389521625 20-21 24.338599941669827 25.828774533897526 26.604868470885805 23.227757053546842 22-23 24.105490783727614 25.54121461039216 26.526244548374457 23.82705005750577 24-25 23.851705076741407 25.667994731892165 26.70024868928912 23.780051502077313 26-27 23.726885473973137 25.869754546605627 26.472385618792448 23.930974360628788 28-29 23.728177339043715 26.121382086517496 26.528708451861515 23.621732122577278 30-31 23.95374194708554 25.85353043766181 26.360938976248722 23.831788639003936 32-33 23.843270853268987 25.82466365787232 26.31868499526823 24.013380493590464 34-35 24.05276607876127 25.898058933274864 26.266384745334815 23.782790242629048 36-37 24.163945420916516 25.652493249872084 26.290466896810678 23.89309443240073 38-39 24.005501141557094 25.761085829157942 26.40153862292045 23.831874406364516 40-41 24.135615723538056 25.637534953226343 26.34867393790275 23.87817538533285 42-43 24.051371996028035 25.613056380502066 26.247399341405238 24.088172282064665 44-45 23.86370129690651 25.66496908857371 26.324771832300232 24.146557782219553 46-47 23.85961088344032 25.713482515303333 26.216332951060263 24.210573650196082 48-49 23.961096564804336 25.70619515153338 26.128980753768378 24.203727529893914 50-51 23.760005235033084 25.823375768698597 26.283674930219846 24.132944066048477 52-53 23.886898445754127 25.669399733102637 26.31449243509027 24.129209386052967 54-55 23.591428165748567 25.497176501974433 26.51897431077434 24.39242102150266 56-57 23.522304760829815 25.60941652483974 26.532525753010024 24.335752961320427 58-59 23.575060078424183 25.432478725506762 26.579210430588297 24.413250765480758 60-61 23.64715204378157 25.384483829420557 26.64092077882791 24.327443347969968 62-63 23.474969682700895 25.461475978445357 26.659388796376014 24.404165542477728 64-65 23.310065190916255 25.31159825202378 26.636621534493877 24.741715022566087 66-67 23.392573219883563 25.422961038961038 26.48475055978504 24.699715181370355 68-69 23.39797996579806 25.12630942730369 26.67171293285936 24.803997674038893 70-71 23.3579076141616 25.01232293167663 26.585277335755684 25.044492118406087 72-73 23.40123342715564 25.142483410514977 26.523922969993418 24.932360192335963 74-75 23.28263459410381 25.119233061348567 26.59685857879801 25.00127376574961 76-77 23.311012626741856 25.002855207081943 26.68417860343592 25.001953562740276 78-79 23.299328076427173 25.04502126944595 26.573060972602537 25.082589681524343 80-81 23.3272231906396 24.9793664594104 26.64755565187245 25.04585469807755 82-83 23.350308008918933 25.021634624330456 26.55488037906324 25.073176987687372 84-85 23.277945640956645 24.88326789770572 26.549350104701773 25.289436356635857 86-87 23.284628013825902 24.815526777669266 26.676602555662544 25.22324265284229 88-89 23.352469949242007 24.601862176276782 26.720448489200972 25.32521938528024 90-91 23.277001541656944 24.66663994652154 26.669906484263507 25.386452027558015 92-93 23.395370606269665 24.501635974843488 26.735493068218574 25.367500350668276 94-95 23.310470514492867 24.374058943101943 26.76843548266351 25.54703505974168 96-97 23.506001644105663 24.11166978640225 26.76987917125967 25.612449398232425 98 23.359505518602024 24.10871628809175 26.685266208567544 25.84651198473868 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 70.0 1 66.5 2 105.0 3 174.0 4 184.0 5 193.5 6 305.0 7 587.5 8 904.0 9 1084.5 10 1115.0 11 1175.5 12 1319.0 13 1469.0 14 1710.5 15 1874.0 16 1947.0 17 2042.0 18 2092.5 19 2138.5 20 2177.0 21 2287.0 22 2534.0 23 2922.0 24 3414.5 25 4242.5 26 5531.0 27 7520.0 28 10247.5 29 14090.5 30 19595.0 31 26660.5 32 33842.0 33 41045.0 34 48709.0 35 57214.5 36 67346.5 37 76988.5 38 84308.0 39 92654.5 40 102050.0 41 110116.0 42 118957.5 43 127521.0 44 136135.0 45 142137.5 46 145919.5 47 151470.0 48 154449.0 49 153912.5 50 153309.0 51 153336.5 52 151934.0 53 150022.0 54 146222.5 55 138241.5 56 127395.0 57 115629.5 58 103904.0 59 89612.0 60 74888.0 61 62063.0 62 51562.0 63 41365.5 64 31219.0 65 23530.5 66 18242.5 67 14608.0 68 10868.5 69 8072.5 70 6482.5 71 5727.0 72 4823.0 73 3308.0 74 2148.0 75 1334.5 76 801.0 77 476.0 78 286.5 79 157.0 80 102.5 81 81.5 82 50.0 83 28.0 84 17.0 85 15.5 86 12.0 87 14.0 88 13.5 89 3.5 90 2.0 91 3.0 92 3.5 93 3.5 94 3.5 95 3.5 96 1.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.37193981290888206 2 0.022024816719004137 3 0.017517146975995518 4 0.015348900770497702 5 0.020541279841558263 6 0.023308646709101526 7 0.013751245671709836 8 0.007959745938603826 9 0.0 10-11 2.8529555335497586E-5 12-13 0.004821494851699092 14-15 0.0026532486462012756 16-17 0.005563263290422029 18-19 0.0360470931664012 20-21 0.07593141152542682 22-23 0.09456121115950675 24-25 0.06195192941103301 26-27 0.07122403489506972 28-29 0.0549621883538361 30-31 0.049841133171114285 32-33 0.018044943749702225 34-35 0.32783312036020273 36-37 0.5024197342357802 38-39 0.45769965624738773 40-41 0.46695749695375677 42-43 0.41867122454842703 44-45 0.3934368328541794 46-47 0.3920246198650723 48-49 0.38270972004803233 50-51 0.3788011709670692 52-53 0.4395263294986758 54-55 0.43951206472100807 56-57 0.4102550057244553 58-59 0.39561934383734504 60-61 0.40948470773039686 62-63 0.3917393243117174 64-65 0.43898426794730133 66-67 0.45859833724045596 68-69 0.4024664371178644 70-71 0.3613125535464091 72-73 0.34767542609604135 74-75 0.32977313012301657 76-77 0.3286604774649322 78-79 0.32838944668924497 80-81 0.3434387871287199 82-83 0.3393305311604083 84-85 0.3389881764963823 86-87 0.32537957860135 88-89 0.36743214316587336 90-91 0.3464058608836117 92-93 0.33684845984622 94-95 0.3439665839024266 96-97 0.3438524656810847 98 0.33838905583433687 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3505137.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.51221423987053 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98856523447898 36.868140441847686 2 12.72514947179683 12.855509527075535 3 5.304196187182321 8.037800825317735 4 2.7401114086575915 5.536363780609027 5 1.6933360815597296 4.276707746592396 6 1.061723570948326 3.217800508755733 7 0.6947684291854455 2.456600421947948 8 0.5122458677895202 2.069973841381811 9 0.37162129717584313 1.6894273121140304 >10 1.7611767582980786 15.585764144470538 >50 0.10534092553168564 3.624717386670231 >100 0.04057086755174827 3.275940256680758 >500 9.664903508665825E-4 0.31637951554298405 >1k 2.2740949302169666E-4 0.18887429099360037 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.8529555335497586E-5 0.0 0.0 0.0 0.0 3 2.8529555335497586E-5 0.0 0.0 2.8529555335497586E-5 0.0 4 2.8529555335497586E-5 0.0 0.0 2.8529555335497586E-5 0.0 5 2.8529555335497586E-5 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 6 8.558866600649276E-5 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 7 1.7117733201298552E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 8 1.7117733201298552E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 9 1.7117733201298552E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 10-11 1.7117733201298552E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 12-13 2.5676599801947826E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 14-15 3.1382510869047345E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 16-17 3.1382510869047345E-4 2.8529555335497586E-5 0.0 2.8529555335497586E-5 0.0 18-19 3.851489970292174E-4 2.8529555335497586E-5 0.0 9.985344367424155E-5 0.0 20-21 4.279433300324638E-4 2.8529555335497586E-5 0.0 1.7117733201298552E-4 0.0 22-23 4.564728853679614E-4 2.8529555335497586E-5 0.0 2.995603310227247E-4 0.0 24-25 5.705911067099517E-4 2.8529555335497586E-5 0.0 5.991206620454494E-4 0.0 26-27 5.705911067099517E-4 2.8529555335497586E-5 0.0 0.0011982413240908987 0.0 28-29 7.56033216390686E-4 2.8529555335497586E-5 0.0 0.006989741057196909 0.0 30-31 8.558866600649276E-4 2.8529555335497586E-5 0.0 0.026974694569712965 0.0 32-33 8.701514377326763E-4 2.8529555335497586E-5 0.0 0.07026829479133055 0.0 34-35 0.001027063992077913 2.8529555335497586E-5 0.0 0.13069389299191442 0.0 36-37 0.0012125061017586474 2.8529555335497586E-5 0.0 0.22682422969487356 0.0 38-39 0.0013123595454328889 2.8529555335497586E-5 0.0 0.38502061403020765 0.0 40-41 0.0013123595454328889 2.8529555335497586E-5 0.0 0.5660406426339398 0.0 42-43 0.001383683433771633 2.8529555335497586E-5 0.0 0.7605694156890301 0.0 44-45 0.0014264777667748793 2.8529555335497586E-5 0.0 0.9936273532247099 0.0 46-47 0.001597655098787865 2.8529555335497586E-5 0.0 1.2757989202704487 0.0 48-49 0.0016832437647943575 2.8529555335497586E-5 0.0 1.5784975023800782 0.0 50-51 0.0016832437647943575 2.8529555335497586E-5 0.0 1.9081137199487497 0.0 52-53 0.0016832437647943575 2.8529555335497586E-5 0.0 2.2409965716033353 0.0 54-55 0.0017117733201298551 7.132388833874396E-5 0.0 2.619555241350053 0.0 56-57 0.0017688324308008502 8.558866600649276E-5 0.0 3.0666276382349675 0.0 58-59 0.0017688324308008502 1.1411822134199034E-4 0.0 3.5531136158158727 0.0 60-61 0.0017830972084685991 1.2838299900973913E-4 0.0 4.064135010985305 0.0 62-63 0.0017973619861363479 1.4264777667748793E-4 0.0 4.588822063160441 0.0 64-65 0.0017973619861363479 1.4264777667748793E-4 0.0 5.161752593407904 0.0 66-67 0.0018829506521428406 1.4264777667748793E-4 0.0 5.80081463292305 0.0 68-69 0.0019400097628138359 1.4264777667748793E-4 0.0 6.500259476305777 0.0 70-71 0.0020113336511525795 1.4264777667748793E-4 0.0 7.241200557923984 0.0 72-73 0.002082657539491324 1.4264777667748793E-4 0.0 7.996834360539973 1.4264777667748793E-5 74-75 0.0021111870948268214 1.4264777667748793E-4 0.0 8.778101968624906 2.8529555335497586E-5 76-77 0.0021111870948268214 1.4264777667748793E-4 0.0 9.629694930611842 2.8529555335497586E-5 78-79 0.0021111870948268214 1.4264777667748793E-4 0.0 10.546306749208377 2.8529555335497586E-5 80-81 0.002353688315178551 1.4264777667748793E-4 0.0 11.494557844671977 2.8529555335497586E-5 82-83 0.0023679530928462996 1.4264777667748793E-4 0.0 12.463435808643144 5.705911067099517E-5 84-85 0.0024535417588527923 1.4264777667748793E-4 0.0 13.449160475039921 5.705911067099517E-5 86 0.002539130424859285 1.4264777667748793E-4 0.0 14.208802680180547 5.705911067099517E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2865 0.0 43.213406 1 GTATCAA 5135 0.0 41.67766 1 ATCAACG 6470 0.0 32.323452 3 TCAACGC 6540 0.0 31.767103 4 CAACGCA 6550 0.0 31.578566 5 TATCAAC 6865 0.0 30.59854 2 AACGCAG 6950 0.0 30.020765 6 GTACATG 10275 0.0 25.531942 1 ACGCAGA 8200 0.0 25.33042 7 TACATGG 10315 0.0 24.94419 2 CGCAGAG 8630 0.0 23.90686 8 ACATGGG 10655 0.0 23.372412 3 GCAGAGT 9680 0.0 20.508766 9 CATGGGG 7335 0.0 19.883102 4 GAGTACA 7815 0.0 18.669003 1 GTATAGG 875 0.0 18.409874 1 AGAGTAC 8665 0.0 17.938112 10-11 AGTACAT 7670 0.0 17.281374 2 GTGTAGC 2050 0.0 15.940256 1 CAGAGTA 9520 0.0 15.893613 10-11 >>END_MODULE