##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920867_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3616703 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.372383355780112 31.0 28.0 31.0 18.0 34.0 2 28.409698280450453 31.0 28.0 33.0 16.0 34.0 3 28.482543908084242 31.0 28.0 34.0 16.0 34.0 4 31.9312174651886 35.0 32.0 37.0 20.0 37.0 5 31.889411433562557 35.0 32.0 37.0 20.0 37.0 6 32.003879500196724 35.0 32.0 37.0 22.0 37.0 7 31.841155881475476 35.0 32.0 37.0 19.0 37.0 8 31.779594287946786 35.0 32.0 37.0 19.0 37.0 9 33.02771916853554 37.0 32.0 39.0 18.0 39.0 10-11 32.82579700351397 37.0 32.0 39.0 17.0 39.0 12-13 32.654902130476295 37.0 32.0 39.0 17.0 39.0 14-15 33.386738557188686 38.0 32.0 40.0 17.0 41.0 16-17 33.277013069638286 38.0 32.0 40.0 16.5 41.0 18-19 33.16522340927635 38.0 32.0 40.0 15.5 41.0 20-21 33.070946522288395 38.0 32.0 40.0 11.5 41.0 22-23 32.83677440475483 38.0 32.0 40.0 10.0 41.0 24-25 32.64958444196275 38.0 31.0 40.0 10.0 41.0 26-27 32.689383673472776 38.0 31.0 40.0 10.0 41.0 28-29 32.530236516517945 38.0 31.0 40.0 9.0 41.0 30-31 32.285260774799596 37.0 30.5 40.0 8.5 41.0 32-33 32.04949341983569 37.0 30.0 40.0 8.0 41.0 34-35 31.723597016398635 37.0 30.0 40.0 4.5 41.0 36-37 31.41974099062046 37.0 30.0 40.0 2.0 41.0 38-39 31.225711511285276 37.0 30.0 40.0 2.0 41.0 40-41 31.036872809296202 36.5 29.5 40.0 2.0 41.0 42-43 30.81497125973573 36.0 29.0 39.5 2.0 41.0 44-45 30.54313915187396 36.0 28.5 39.0 2.0 40.5 46-47 30.296727433798132 36.0 28.0 39.0 2.0 40.0 48-49 30.006009340551323 35.0 27.0 39.0 2.0 40.0 50-51 28.90007902224761 34.0 25.5 38.0 2.0 39.5 52-53 29.35692742810234 34.5 27.0 38.5 2.0 39.5 54-55 30.009601977270457 36.0 28.0 39.0 2.0 40.0 56-57 29.965017033469437 35.5 28.0 39.0 2.0 41.0 58-59 29.727787020388458 35.0 27.5 39.0 2.0 40.5 60-61 29.409083079257545 35.0 27.0 39.0 2.0 40.0 62-63 29.024280677733284 35.0 26.0 39.0 2.0 40.0 64-65 28.60896581776275 34.0 26.0 38.0 2.0 40.0 66-67 28.220124240226525 34.0 25.5 38.0 2.0 40.0 68-69 27.76819882638967 34.0 24.5 37.0 2.0 40.0 70-71 27.43764265409684 34.0 24.0 37.0 2.0 39.0 72-73 26.967670002209196 33.0 22.5 36.0 2.0 39.0 74-75 26.517333742914474 33.0 22.0 36.0 2.0 39.0 76-77 26.08023882525051 32.5 20.5 35.0 2.0 37.5 78-79 25.5998412089685 32.0 19.0 35.0 2.0 37.0 80-81 25.132087014056726 32.0 17.5 35.0 2.0 36.5 82-83 24.636602590812682 31.5 10.0 35.0 2.0 36.0 84-85 24.222200164072085 31.0 7.0 34.5 2.0 35.5 86-87 23.750847387800434 31.0 2.0 34.0 2.0 35.0 88-89 23.208094084584772 31.0 2.0 34.0 2.0 35.0 90-91 22.697548568406088 30.0 2.0 34.0 2.0 35.0 92-93 22.1403267008654 30.0 2.0 34.0 2.0 35.0 94-95 21.49376780454464 29.5 2.0 34.0 2.0 35.0 96-97 20.84113749456342 29.0 2.0 34.0 2.0 35.0 98 20.441199899466447 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 201076.0 3 33950.0 4 24287.0 5 19631.0 6 18134.0 7 18352.0 8 20744.0 9 23946.0 10 26289.0 11 28272.0 12 28922.0 13 28944.0 14 27511.0 15 28694.0 16 30683.0 17 33363.0 18 34220.0 19 34488.0 20 35930.0 21 37644.0 22 41246.0 23 46167.0 24 52455.0 25 59614.0 26 68435.0 27 79210.0 28 91589.0 29 104911.0 30 122033.0 31 142374.0 32 168249.0 33 202531.0 34 249560.0 35 314326.0 36 396883.0 37 443359.0 38 271826.0 39 26853.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.475156106072475 18.38486727896271 13.386891891254313 24.7530847237105 2 15.766031242333991 19.665722569202547 39.59313003847836 24.97511614998511 3 19.384463325349373 23.70600766205964 28.987867529830623 27.921661482760367 4 13.225952304903494 15.95121256493538 36.97496885452401 33.84786627563712 5 14.43724781450763 36.84603237377243 34.32283614822354 14.393883663496402 6 33.20164650480019 35.17183264369444 17.494860203622775 14.131660647882601 7 28.96967229956095 31.33010655663585 21.12475004832422 18.57547109547898 8 26.33189017866747 34.53696690864878 20.281590749652345 18.849552163031404 9 26.569143222432146 15.895250453244294 19.70438269329829 37.831223631025274 10-11 25.36131334034617 25.466768545869765 27.96790113864802 21.204016975136046 12-13 26.03264068945666 22.710021127993166 27.72387557240658 23.533462610143594 14-15 23.247869297856447 24.367515306893413 25.229432314615746 27.155183080634394 16-17 23.376203404996364 27.30909835977181 25.899161318276825 23.415536916954995 18-19 23.32613824037935 26.644542954400684 27.24491463940497 22.78440416581499 20-21 24.28468790991168 25.917119551119 26.870158796523874 22.92803374244545 22-23 23.808806877189234 25.76165939049536 26.67506808567344 23.75446564664196 24-25 23.58266258049933 25.870203412892234 26.81691179705135 23.730222209557084 26-27 23.477332382983967 26.147727400069094 26.682160570951158 23.692779645995785 28-29 23.528413389177594 26.258366714430025 26.65124904711891 23.56197084927347 30-31 23.88010981192329 26.06897602926547 26.45769961503861 23.59321454377262 32-33 23.48429235357992 26.066339963587094 26.40823467644241 24.04113300639058 34-35 23.944469789156805 26.10477786126352 26.40998707119139 23.540765278388278 36-37 24.02305834770184 25.820269442020166 26.348484960065292 23.808187250212697 38-39 23.76383991386785 25.955490334230124 26.444039172239158 23.836630579662863 40-41 23.963055613816017 25.80717747278619 26.506701187726318 23.723065725671475 42-43 23.872988300932953 25.823480682427295 26.328835842246335 23.97469517439341 44-45 23.765956481144386 25.837136221515816 26.498969927261307 23.89793737007849 46-47 23.75095525187976 25.761154968572804 26.374792398401866 24.11309738114557 48-49 23.676377829820453 25.793265677855842 26.43964957932171 24.090706913001995 50-51 23.633103953223056 25.899733039797844 26.475341256515627 23.991821750463473 52-53 23.63791808005981 25.798911664716417 26.53238338317614 24.030786872047635 54-55 23.466207172546216 25.704921847998406 26.713580686805592 24.11529029264978 56-57 23.455061054042567 25.81076620109506 26.621580988886418 24.112591755975956 58-59 23.41743549029596 25.678172533877053 26.6697988682435 24.234593107583493 60-61 23.398301777806836 25.61249844002715 26.842069389535943 24.14713039263007 62-63 23.309138396638645 25.64494886918731 26.87188295937058 24.174029774803465 64-65 23.240968750581466 25.441852831160162 26.765710315171365 24.551468103087007 66-67 23.1824527700217 25.53695177058947 26.709340219175097 24.57125524021373 68-69 23.3094624462794 25.391783345569298 26.67242999300544 24.62632421514586 70-71 23.07919536875972 25.18773170319181 26.78787555879675 24.945197369251726 72-73 23.036565177117108 25.14878547298305 26.842509992443325 24.97213935745652 74-75 22.975263309084287 25.281417153744375 26.790635624446825 24.952683912724517 76-77 22.967225047755427 25.07642532538325 26.87935561938357 25.076994007477754 78-79 22.85477142509988 25.063318107397496 26.93513451734264 25.146775950159984 80-81 22.92018103042625 24.943400246819316 26.90732844725791 25.229090275496524 82-83 22.892969668906378 24.834927610074732 27.004440540577658 25.26766218044123 84-85 22.807578259557165 24.896085801416927 26.96654603686145 25.329789902164457 86-87 22.76320092806575 24.777103051193688 27.094992755727805 25.36470326501276 88-89 22.744818726722414 24.610217252636442 27.07724444137326 25.567719579267884 90-91 22.705398252592126 24.595725164279898 27.110167936110113 25.588708647017867 92-93 22.76196218990441 24.353397483460668 27.170712496984684 25.713927829650242 94-95 22.614000990498702 24.305506423675418 27.273992195314133 25.806500390511744 96-97 22.742761969790756 24.112099539961175 27.237580741239327 25.907557749008742 98 22.729632185113452 23.935447553842486 27.15710501105717 26.177815249986892 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 72.0 1 54.0 2 82.0 3 134.5 4 133.0 5 165.5 6 262.5 7 463.0 8 710.5 9 842.5 10 926.0 11 1071.0 12 1236.5 13 1397.5 14 1591.0 15 1736.0 16 1842.5 17 1867.0 18 1835.0 19 1830.0 20 1875.5 21 1996.5 22 2145.5 23 2365.0 24 2775.5 25 3512.0 26 4613.5 27 6160.0 28 8445.0 29 11933.5 30 17195.0 31 24571.5 32 32806.5 33 41487.0 34 51547.5 35 62904.0 36 73965.5 37 84228.0 38 94330.0 39 104794.5 40 114402.5 41 121930.5 42 130287.5 43 139337.5 44 146269.5 45 152864.5 46 159884.0 47 165186.0 48 168473.0 49 167963.0 50 166247.0 51 164116.0 52 159553.0 53 155507.5 54 148415.5 55 138465.0 56 125787.0 57 111270.0 58 98934.5 59 85562.0 60 71563.5 61 58916.0 62 47383.5 63 36010.5 64 26213.0 65 19402.5 66 14467.0 67 10761.5 68 7679.0 69 5342.5 70 3687.0 71 2648.0 72 2033.5 73 1438.0 74 1052.0 75 750.0 76 464.5 77 294.0 78 188.0 79 97.5 80 65.5 81 41.5 82 22.0 83 17.0 84 14.0 85 11.0 86 10.5 87 9.0 88 6.5 89 7.0 90 7.5 91 5.0 92 2.0 93 5.5 94 5.5 95 2.0 96 2.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.374484717158141 2 0.02499514060181331 3 0.019465242238580274 4 0.01681089102422842 5 0.02247903684654228 6 0.022147242944748298 7 0.013935343875347244 8 0.008847837381172853 9 0.0 10-11 4.147423772424775E-5 12-13 0.004811011576012739 14-15 0.0031382173211347464 16-17 0.005364001412336042 18-19 0.03528075155742675 20-21 0.0757181333385683 22-23 0.09468568472445761 24-25 0.06171366573368065 26-27 0.07170895702522435 28-29 0.05550635482095157 30-31 0.04963083781001647 32-33 0.0187325307054519 34-35 0.3307570458508758 36-37 0.505059442259981 38-39 0.4604608119605066 40-41 0.4691565771366905 42-43 0.4196225125480306 44-45 0.39504211432345976 46-47 0.3940052583803536 48-49 0.38406526607244224 50-51 0.37966899687367195 52-53 0.4391430537702432 54-55 0.4404978788692353 56-57 0.41181153110996394 58-59 0.3964384136601762 60-61 0.4113553144949972 62-63 0.3933831448144898 64-65 0.4396269198770261 66-67 0.4606128841654955 68-69 0.4041387971309781 70-71 0.3619180231276939 72-73 0.3485080195968538 74-75 0.3305911488999788 76-77 0.32839301430059364 78-79 0.32872480820238764 80-81 0.34415322463580783 82-83 0.34007492459292343 84-85 0.3397293059452214 86-87 0.32587691054532264 88-89 0.36822210726177956 90-91 0.3474020399242072 92-93 0.33703348049314524 94-95 0.3444573690457856 96-97 0.34401497717672697 98 0.33881687271528793 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3616703.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.93095268167231 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29344207309704 39.52785156321086 2 12.381583827569576 13.355012230576277 3 5.454967776392893 8.82574827086077 4 2.8437628767861796 6.13467364583407 5 1.7089214067354443 4.608187976167306 6 1.0529760242932171 3.4072800084655754 7 0.7258526462702035 2.740214730390548 8 0.5016554833520427 2.164380650812837 9 0.38783359855377697 1.8824611906769793 >10 1.5861188079655721 14.092157290703868 >50 0.04883043563690422 1.7786132171024618 >100 0.013436261958825819 1.180434091184091 >500 4.1252092892390496E-4 0.1516733305943875 >1k 2.0626045943907396E-4 0.15131180341997327 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1059796726466066E-4 2 0.0 0.0 0.0 2.7649491816165165E-5 1.3824745908082582E-4 3 0.0 0.0 0.0 5.529898363233033E-5 1.3824745908082582E-4 4 0.0 0.0 0.0 5.529898363233033E-5 1.3824745908082582E-4 5 0.0 0.0 0.0 5.529898363233033E-5 1.3824745908082582E-4 6 0.0 0.0 0.0 5.529898363233033E-5 3.0414440997781684E-4 7 0.0 0.0 0.0 5.529898363233033E-5 3.0414440997781684E-4 8 0.0 0.0 0.0 5.529898363233033E-5 3.0414440997781684E-4 9 0.0 0.0 0.0 8.29484754484955E-5 5.529898363233033E-4 10-11 0.0 0.0 0.0 8.29484754484955E-5 6.221135658637162E-4 12-13 0.0 0.0 0.0 8.29484754484955E-5 6.912372954041291E-4 14-15 0.0 0.0 0.0 8.29484754484955E-5 6.912372954041291E-4 16-17 0.0 0.0 0.0 8.29484754484955E-5 6.912372954041291E-4 18-19 0.0 0.0 0.0 9.677322135657808E-5 6.912372954041291E-4 20-21 0.0 0.0 0.0 1.2442271317274325E-4 7.188867872202943E-4 22-23 0.0 0.0 0.0 2.9031966406973424E-4 7.465362790364594E-4 24-25 0.0 0.0 0.0 6.91237295404129E-4 7.465362790364594E-4 26-27 0.0 0.0 0.0 0.0016174952712456623 7.741857708526246E-4 28-29 0.0 0.0 0.0 0.005336351920519877 7.741857708526246E-4 30-31 0.0 0.0 0.0 0.022354614133369536 7.741857708526246E-4 32-33 0.0 0.0 0.0 0.060414139618320886 0.0010230311971981111 34-35 0.0 0.0 0.0 0.1127131533885973 0.0011474539103708543 36-37 0.0 0.0 0.0 0.20221455839752395 0.0012995261153597626 38-39 0.0 0.0 0.0 0.35083057690941166 0.001354825098992093 40-41 0.0 0.0 0.0 0.5264739736716009 0.001354825098992093 42-43 0.0 0.0 0.0 0.7107163623886175 0.001354825098992093 44-45 0.0 0.0 0.0 0.9391149895360498 0.0013824745908082583 46-47 0.0 0.0 0.0 1.211669855113898 0.0013824745908082583 48-49 0.0 0.0 0.0 1.505459530406561 0.0013962993367163407 50-51 0.0 0.0 0.0 1.8202904689713255 0.0014101240826244234 52-53 0.0 0.0 0.0 2.1408310275961284 0.0014101240826244234 54-55 0.0 0.0 0.0 2.5081683511197905 0.001423948828532506 56-57 0.0 0.0 0.0 2.9332378135556056 0.0014515983203486713 58-59 0.0 0.0 0.0 3.393007388220708 0.0014930725580729188 60-61 0.0 0.0 0.0 3.8787398357011895 0.0014930725580729188 62-63 0.0 0.0 0.0 4.37587769855584 0.0014930725580729188 64-65 0.0 0.0 0.0 4.907259457024809 0.0015068973039810015 66-67 0.0 0.0 0.0 5.515327081045914 0.0015207220498890841 68-69 1.3824745908082582E-5 0.0 0.0 6.183117607389935 0.0015483715417052492 70-71 2.7649491816165165E-5 0.0 0.0 6.897580475919643 0.001589845779429497 72-73 2.7649491816165165E-5 0.0 0.0 7.617932686206194 0.0016036705253375796 74-75 2.7649491816165165E-5 0.0 0.0 8.359547355699377 0.0016036705253375796 76-77 2.7649491816165165E-5 0.0 0.0 9.16669132079687 0.0016313200171537447 78-79 2.7649491816165165E-5 0.0 0.0 10.048378315830744 0.0016313200171537447 80-81 2.7649491816165165E-5 0.0 0.0 10.969534960432195 0.0016313200171537447 82-83 2.7649491816165165E-5 0.0 0.0 11.900133906488865 0.0016451447630618273 84-85 2.7649491816165165E-5 2.7649491816165165E-5 0.0 12.836898689220542 0.00165896950896991 86 2.7649491816165165E-5 2.7649491816165165E-5 0.0 13.55864719884381 0.00165896950896991 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2930 0.0 40.99753 1 GTATCAA 5235 0.0 40.08972 1 TCAACGC 6425 0.0 31.83995 4 ATCAACG 6585 0.0 30.927002 3 CAACGCA 6645 0.0 30.509697 5 TATCAAC 6905 0.0 29.62701 2 AACGCAG 7165 0.0 28.611584 6 GTACATG 10200 0.0 23.373 1 ACGCAGA 8475 0.0 23.210478 7 TACATGG 10865 0.0 21.826166 2 CGCAGAG 8885 0.0 21.725668 8 ACATGGG 10915 0.0 21.011492 3 GTGTAGC 2285 0.0 20.141819 1 CATGGGG 7465 0.0 18.740479 4 GCAGAGT 10315 0.0 17.913906 9 GAGTACA 8120 0.0 17.570759 1 AGAGTAC 8410 0.0 17.446747 10-11 GTATATA 1425 0.0 17.440693 1 AGTACAT 7725 0.0 17.041195 2 GTAGCCC 1860 0.0 17.01558 3 >>END_MODULE