##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920866_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2633983 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.020203623182077 31.0 28.0 31.0 16.0 34.0 2 28.044969538527774 31.0 28.0 33.0 16.0 34.0 3 28.101483570698825 31.0 28.0 33.0 16.0 34.0 4 31.52478167095232 35.0 32.0 37.0 17.0 37.0 5 31.464347340130896 35.0 32.0 37.0 17.0 37.0 6 31.59156684002896 35.0 32.0 37.0 18.0 37.0 7 31.411800683603502 35.0 32.0 37.0 17.0 37.0 8 31.341211769400182 35.0 32.0 37.0 17.0 37.0 9 32.54034896960231 37.0 32.0 39.0 17.0 39.0 10-11 32.33020429516819 37.0 32.0 39.0 16.0 39.0 12-13 32.14559148635355 37.0 32.0 39.0 12.5 39.0 14-15 32.832109015130314 38.0 32.0 40.0 10.5 41.0 16-17 32.712740552995214 38.0 31.5 40.0 10.0 41.0 18-19 32.60376832348577 38.0 31.0 40.0 10.0 41.0 20-21 32.51442701034897 38.0 31.0 40.0 10.0 41.0 22-23 32.28511763363697 37.0 31.0 40.0 9.5 41.0 24-25 32.07902271958475 37.0 30.5 40.0 8.0 41.0 26-27 32.08881169696235 37.0 30.5 40.0 8.0 41.0 28-29 31.91657994755471 37.0 30.0 40.0 4.5 41.0 30-31 31.654636533341332 37.0 30.0 40.0 2.0 41.0 32-33 31.389763525428982 37.0 30.0 40.0 2.0 41.0 34-35 31.05408804840426 36.5 29.5 40.0 2.0 41.0 36-37 30.741694991957047 36.0 29.0 40.0 2.0 41.0 38-39 30.527785107193175 36.0 28.0 39.0 2.0 41.0 40-41 30.313658060815122 36.0 28.0 39.0 2.0 40.0 42-43 30.066983917511998 35.5 27.0 39.0 2.0 40.0 44-45 29.775407434292475 35.0 27.0 39.0 2.0 40.0 46-47 29.505877410750184 35.0 26.0 39.0 2.0 40.0 48-49 29.19334255384336 35.0 26.0 39.0 2.0 40.0 50-51 28.10057449117933 34.0 24.0 38.0 2.0 39.5 52-53 28.558561311899126 34.5 25.0 38.0 2.0 39.5 54-55 29.190272868124055 35.0 26.0 39.0 2.0 40.0 56-57 29.13603143983845 35.0 26.0 39.0 2.0 40.0 58-59 28.89173981001396 35.0 26.0 39.0 2.0 40.0 60-61 28.560635926655564 34.0 25.5 39.0 2.0 40.0 62-63 28.162221434230972 34.0 24.5 38.0 2.0 40.0 64-65 27.743969304281766 34.0 23.0 38.0 2.0 40.0 66-67 27.35240888039141 34.0 22.5 37.0 2.0 40.0 68-69 26.908981189324304 33.0 21.5 37.0 2.0 39.0 70-71 26.57409083505854 33.0 20.5 36.0 2.0 39.0 72-73 26.116429566933427 32.5 19.5 36.0 2.0 39.0 74-75 25.681578051187117 32.0 18.0 35.0 2.0 38.5 76-77 25.260983461168884 32.0 15.0 35.0 2.0 37.0 78-79 24.799415941560746 32.0 9.5 35.0 2.0 37.0 80-81 24.350913236721723 31.0 7.0 35.0 2.0 36.0 82-83 23.872757910738223 31.0 2.0 34.5 2.0 36.0 84-85 23.475618483490592 31.0 2.0 34.0 2.0 35.0 86-87 23.022457244408944 30.5 2.0 34.0 2.0 35.0 88-89 22.489026884380042 30.0 2.0 34.0 2.0 35.0 90-91 21.991268736358585 30.0 2.0 34.0 2.0 35.0 92-93 21.45163313506579 29.0 2.0 34.0 2.0 35.0 94-95 20.82112716748741 29.0 2.0 34.0 2.0 35.0 96-97 20.183155699941874 29.0 2.0 34.0 2.0 35.0 98 19.785721472006465 28.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 164049.0 3 27477.0 4 19637.0 5 15790.0 6 14882.0 7 15193.0 8 17497.0 9 19615.0 10 21054.0 11 22763.0 12 23323.0 13 22775.0 14 21892.0 15 23224.0 16 25109.0 17 26620.0 18 27186.0 19 26855.0 20 27431.0 21 29188.0 22 31590.0 23 34903.0 24 39461.0 25 45600.0 26 51658.0 27 59660.0 28 68248.0 29 78998.0 30 90782.0 31 105624.0 32 124502.0 33 150152.0 34 182795.0 35 227409.0 36 277075.0 37 290835.0 38 166902.0 39 16228.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.11288777023755 18.029337164790373 13.377637412943514 24.480137652028567 2 15.750344330517803 19.351583958356038 39.85294893883163 25.04512277229452 3 19.590113885943943 23.64766137386122 28.712305089173697 28.049919651021142 4 13.211184539278332 15.39898024122444 36.40868420133325 34.98115101816398 5 14.310239615345619 36.97878317585172 34.01473895821759 14.696238250585072 6 33.814947794931584 34.73525318366425 17.080997127249738 14.368801894154437 7 29.478557669561688 31.500315727641148 20.563988671016354 18.457137931780807 8 26.87010826273133 34.370474656557995 19.726947373696643 19.03246970701403 9 27.04094901144009 15.922691983964969 19.332698806332463 37.703660198262476 10-11 25.760364770836556 25.338513069088346 27.324080551028718 21.577041609046375 12-13 26.335510435759023 22.625811430214863 27.349044792751304 23.689633341274803 14-15 23.385269339608406 24.206461523333424 24.91956363807557 27.488705498982597 16-17 23.488088794949284 27.235046425499466 25.718935084791482 23.557929694759768 18-19 23.43859367944195 26.417313609013505 27.1975752622362 22.94651744930834 20-21 24.173460854724624 25.71191274868172 27.078102102978345 23.036524293615308 22-23 23.79946354228913 25.460650806007095 26.963431611712085 23.776454039991695 24-25 23.57287568204551 25.76621020316912 26.884056346845902 23.776857767939465 26-27 23.374388489536624 25.86778779530259 26.911380396598243 23.846443318562542 28-29 23.454005634885693 26.194659204134123 26.680579777088877 23.670755383891308 30-31 23.78903854470204 25.946106814354476 26.491161731025585 23.773692909917894 32-33 23.38606065841598 25.88640477991887 26.58097012835495 24.146564433310203 34-35 23.908935316471027 26.007640518589444 26.46705421485312 23.616369950086412 36-37 24.032574204471153 25.66412648807594 26.51397873910194 23.789320568350973 38-39 23.834971382987504 25.836646515881828 26.446927972908075 23.881454128222597 40-41 23.957763486737544 25.72289996295143 26.573796727103062 23.745539823207963 42-43 23.821917534084445 25.628185812752115 26.488980625684334 24.06091602747911 44-45 23.69079791915608 25.708609062048225 26.59364035835698 24.006952660438717 46-47 23.88084841731559 25.765466528154946 26.349422236923637 24.004262817605827 48-49 23.761030678895573 25.721703666290253 26.332774269684606 24.184491385129565 50-51 23.690027943758874 25.95953670554762 26.428638247112602 23.921797103580904 52-53 23.840303783859003 25.690247596426495 26.47978825106013 23.98966036865437 54-55 23.389541270867333 25.691755662938426 26.722519400688434 24.196183665505806 56-57 23.49748926441136 25.81812589296485 26.542445810361855 24.141939032261938 58-59 23.445284237664552 25.522367156156122 26.62027425764365 24.412074348535675 60-61 23.33825524280552 25.50785301201421 26.88509831558638 24.268793429593888 62-63 23.233378904296213 25.494314744508856 26.998023141157248 24.274283210037677 64-65 23.139207467170333 25.511605594506374 26.756508887414267 24.592678050909026 66-67 23.140841737867756 25.603869063337303 26.70118536395541 24.55410383483953 68-69 23.404326272786832 25.18601631432536 26.816515100641087 24.593142312246723 70-71 23.097157107687945 25.158732154299923 26.830362891458677 24.91374784655346 72-73 23.054923166381958 25.176754176038223 26.812657619813912 24.955665037765904 74-75 22.998347063371458 25.288349843656572 26.927651649318452 24.78565144365352 76-77 23.09905801490929 25.036728601769028 26.911901057193404 24.952312326128276 78-79 23.034466683970116 25.040841793203704 26.96032514237738 24.9643663804488 80-81 23.078471637361076 25.076382706977995 26.928994269916164 24.916151385744765 82-83 23.00310945996106 24.98135980929204 27.053939522175018 24.96159120857188 84-85 22.96815797317153 24.948440846238597 26.996294825611127 25.08710635497875 86-87 22.95620149540078 24.889235037661134 27.13147930041979 25.023084166518295 88-89 22.952939842970885 24.669592111015756 27.053165680670638 25.32430236534272 90-91 22.81585027598813 24.699818509307946 27.20453861957749 25.279792595126434 92-93 22.98829801051324 24.378859098874823 27.24983250496772 25.383010385644216 94-95 22.749079096651 24.31906670366596 27.415675040581455 25.516179159101586 96-97 22.90168758619389 24.049345997736985 27.42236621650782 25.6266001995613 98 22.853367654413436 23.93464927098811 27.495588296349172 25.71639477824928 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 67.0 1 52.0 2 70.0 3 117.5 4 123.0 5 133.0 6 209.0 7 408.5 8 637.5 9 719.5 10 746.5 11 818.5 12 924.5 13 1058.5 14 1215.0 15 1307.5 16 1414.0 17 1503.0 18 1565.0 19 1605.5 20 1594.0 21 1726.5 22 1957.0 23 2332.0 24 2900.5 25 3633.5 26 4689.0 27 6213.5 28 8267.5 29 11479.0 30 16328.5 31 22644.5 32 28348.5 33 33331.0 34 39475.5 35 46548.0 36 54347.5 37 61460.0 38 67071.0 39 73261.5 40 78905.0 41 83417.0 42 89595.5 43 96031.5 44 101813.5 45 105609.5 46 108281.0 47 112727.0 48 115015.5 49 114216.5 50 113654.0 51 112574.0 52 110128.5 53 108972.5 54 106512.5 55 101752.0 56 94987.5 57 86581.5 58 78626.5 59 68378.0 60 57277.0 61 47166.5 62 38518.5 63 30201.0 64 22295.5 65 16910.0 66 12657.0 67 9137.0 68 6579.0 69 4746.5 70 3436.5 71 2456.5 72 1859.0 73 1435.5 74 1046.0 75 716.0 76 446.5 77 268.0 78 156.5 79 82.5 80 42.0 81 32.5 82 25.0 83 20.0 84 13.5 85 9.0 86 10.5 87 8.5 88 5.5 89 7.0 90 8.0 91 5.0 92 2.5 93 1.5 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3566461894400989 2 0.023234774104464607 3 0.01788166438431835 4 0.015907467891782143 5 0.02103278570894345 6 0.023462566007449556 7 0.014578681791036616 8 0.007782890018652361 9 0.0 10-11 1.8982658582078926E-5 12-13 0.0049544738899226 14-15 0.002600624225744813 16-17 0.0052961617444000205 18-19 0.03629484320893491 20-21 0.07418422973876446 22-23 0.09345162819957456 24-25 0.06241498141787552 26-27 0.07112802170704974 28-29 0.055201571156685524 30-31 0.04982947877795719 32-33 0.017672855139915483 34-35 0.3130240400184815 36-37 0.4800714355407761 38-39 0.43677199131505406 40-41 0.44607349402027274 42-43 0.39998359898298513 44-45 0.3778118537591169 46-47 0.3757427439736703 48-49 0.366536154561362 50-51 0.3646378887031541 52-53 0.42010521707998877 54-55 0.420408939617302 56-57 0.39292204999045166 58-59 0.3792925011285191 60-61 0.3925613794773923 62-63 0.3747366630688201 64-65 0.42097841937476443 66-67 0.43810077741579956 68-69 0.38549983048485886 70-71 0.3462816578542838 72-73 0.3339998777516787 74-75 0.31712429427221056 76-77 0.3152829763897489 78-79 0.3152070457554206 80-81 0.33090570440279987 82-83 0.32678646749048873 84-85 0.32652071027033963 86-87 0.3138023290203467 88-89 0.3534760854568917 90-91 0.3333165020427239 92-93 0.3239200860445948 94-95 0.33058299920690454 96-97 0.3312284095986952 98 0.3257424212684744 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2633983.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.25716390079997 #Duplication Level Percentage of deduplicated Percentage of total 1 73.51981609624842 36.948974475058286 2 11.205829322678087 11.263464018284457 3 5.198691261883429 7.838144364543961 4 2.9546573847643884 5.9397080182725155 5 1.8626899288906988 4.680675652631465 6 1.2051865111039766 3.63415536117515 7 0.8596049786832274 3.0240915812538636 8 0.6113986506201385 2.4581729754355393 9 0.4552460697145886 2.059143870675698 >10 2.030822209752477 16.710323797234928 >50 0.07030062395424465 2.4264771588240968 >100 0.023623150110449038 2.0533149432078805 >500 0.0013717360259412525 0.46729533301611575 >1k 7.620755699570542E-4 0.4960584503860958 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.59306343283157E-5 2 0.0 0.0 0.0 0.0 7.59306343283157E-5 3 0.0 0.0 0.0 0.0 7.59306343283157E-5 4 0.0 0.0 0.0 0.0 7.59306343283157E-5 5 0.0 0.0 0.0 0.0 7.59306343283157E-5 6 0.0 0.0 0.0 0.0 7.59306343283157E-5 7 0.0 0.0 0.0 0.0 7.59306343283157E-5 8 0.0 0.0 0.0 0.0 7.59306343283157E-5 9 0.0 0.0 0.0 0.0 7.59306343283157E-5 10-11 0.0 0.0 0.0 0.0 7.59306343283157E-5 12-13 0.0 0.0 0.0 1.8982658582078926E-5 1.518612686566314E-4 14-15 0.0 0.0 0.0 7.59306343283157E-5 1.8982658582078927E-4 16-17 0.0 0.0 0.0 7.59306343283157E-5 2.2779190298494713E-4 18-19 0.0 0.0 0.0 7.59306343283157E-5 2.4677456156702607E-4 20-21 0.0 0.0 0.0 1.8982658582078927E-4 2.65757220149105E-4 22-23 0.0 0.0 0.0 3.7965317164157853E-4 2.65757220149105E-4 24-25 0.0 0.0 0.0 8.921849533577097E-4 2.65757220149105E-4 26-27 0.0 0.0 0.0 0.0019172485167899716 2.65757220149105E-4 28-29 0.0 0.0 0.0 0.0067198611380559405 2.65757220149105E-4 30-31 0.0 0.0 0.0 0.025038126669762108 2.65757220149105E-4 32-33 0.0 0.0 0.0 0.06541424147384399 2.65757220149105E-4 34-35 0.0 0.0 0.0 0.11955278374993308 2.65757220149105E-4 36-37 0.0 0.0 0.0 0.21106818077413558 2.65757220149105E-4 38-39 0.0 0.0 0.0 0.3651124551677061 2.65757220149105E-4 40-41 0.0 0.0 0.0 0.5393352956340265 2.65757220149105E-4 42-43 0.0 0.0 0.0 0.715987916398853 2.65757220149105E-4 44-45 0.0 0.0 0.0 0.9293150335442559 2.847398787311839E-4 46-47 0.0 0.0 0.0 1.1885422191411257 3.416878544774207E-4 48-49 0.0 0.0 0.0 1.4747057972659658 3.606705130594996E-4 50-51 0.0 0.0 0.0 1.7903494441687742 3.7965317164157853E-4 52-53 0.0 0.0 0.0 2.1015891142805403 4.176184888057364E-4 54-55 0.0 0.0 0.0 2.446674864644153 4.5558380596989425E-4 56-57 0.0 0.0 0.0 2.8525241051290005 4.5558380596989425E-4 58-59 0.0 0.0 0.0 3.2916309634496503 4.5558380596989425E-4 60-61 0.0 0.0 0.0 3.767829936639682 4.745664645519732E-4 62-63 0.0 0.0 0.0 4.248015268131951 5.504970988802889E-4 64-65 0.0 0.0 0.0 4.747619859353685 6.074450746265256E-4 66-67 0.0 0.0 0.0 5.330748148336568 6.074450746265256E-4 68-69 0.0 0.0 0.0 5.969571557599271 6.074450746265256E-4 70-71 0.0 0.0 0.0 6.653725555555978 6.074450746265256E-4 72-73 0.0 0.0 0.0 7.349193218027603 6.074450746265256E-4 74-75 0.0 0.0 0.0 8.043180233129826 6.454103917906836E-4 76-77 0.0 0.0 0.0 8.799202576478283 6.454103917906836E-4 78-79 0.0 0.0 0.0 9.633946004966623 6.454103917906836E-4 80-81 0.0 0.0 0.0 10.517474866010904 6.643930503727625E-4 82-83 0.0 0.0 0.0 11.414519379965625 6.833757089548414E-4 84-85 0.0 0.0 0.0 12.306286714834531 6.833757089548414E-4 86 0.0 0.0 0.0 12.98060769564572 7.213410261189992E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3215 0.0 40.369297 1 GTATCAA 5540 0.0 37.96553 1 TCAACGC 6965 0.0 29.63945 4 ATCAACG 6950 0.0 29.637417 3 CAACGCA 7000 0.0 29.360184 5 TATCAAC 7085 0.0 28.87954 2 AACGCAG 7215 0.0 28.798819 6 GTACATG 9185 0.0 25.85554 1 TACATGG 9585 0.0 24.07527 2 ACGCAGA 8500 0.0 23.849714 7 CGCAGAG 8540 0.0 23.30703 8 ACATGGG 9940 0.0 22.47612 3 GTCTACG 275 8.0035534E-11 21.756735 1 TAAGGTG 1140 0.0 21.327984 5 TAAGGCG 775 0.0 20.717869 5 CATGGGG 6725 0.0 20.669458 4 GCAGAGT 9425 0.0 19.610052 9 GTATAGG 655 0.0 18.971668 1 GTAAGGT 945 0.0 18.932657 4 GTATAGA 905 0.0 18.307833 1 >>END_MODULE