##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920866_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2633983 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.26783012646627 31.0 30.0 34.0 27.0 34.0 2 30.26986165058772 31.0 30.0 34.0 26.0 34.0 3 30.40387010850108 31.0 30.0 34.0 27.0 34.0 4 34.06148748871956 35.0 35.0 37.0 30.0 37.0 5 33.598973493754514 35.0 35.0 37.0 28.0 37.0 6 33.55881188299241 35.0 35.0 37.0 28.0 37.0 7 33.372104907283 35.0 33.0 37.0 27.0 37.0 8 33.302878188659534 35.0 33.0 37.0 27.0 37.0 9 34.62611603795469 38.0 34.0 39.0 27.0 39.0 10-11 34.43276684018082 37.0 34.0 39.0 27.0 39.0 12-13 34.26435724907867 37.0 34.0 39.0 27.0 39.0 14-15 35.15125837942007 38.0 34.0 40.0 26.5 41.0 16-17 35.0315854354413 38.0 34.0 40.0 26.0 41.0 18-19 34.94814488172475 38.0 34.0 40.0 25.0 41.0 20-21 34.835470274485445 38.0 34.0 40.0 25.0 41.0 22-23 34.700017236254 38.0 34.0 40.0 25.0 41.0 24-25 34.523079306130676 38.0 33.0 40.0 24.0 41.0 26-27 34.33981312711585 38.0 33.0 40.0 24.0 41.0 28-29 34.27885202751878 38.0 33.0 40.0 23.5 41.0 30-31 34.26020688060629 38.0 33.0 40.0 23.5 41.0 32-33 34.110025197581 38.0 33.0 40.0 23.0 41.0 34-35 33.94465245219882 38.0 33.0 40.0 22.0 41.0 36-37 33.75029280750863 38.0 33.0 40.0 20.5 41.0 38-39 33.56275932684456 38.0 32.0 40.0 19.0 41.0 40-41 33.32282763404319 38.0 32.0 40.0 18.0 41.0 42-43 33.33846991419459 38.0 32.0 40.0 18.0 41.0 44-45 33.18614603814831 38.0 32.0 40.0 15.5 41.0 46-47 32.93368028571179 37.5 31.5 40.0 15.0 41.0 48-49 32.66451283094841 37.0 31.0 40.0 12.5 41.0 50-51 32.40475432073784 37.0 31.0 40.0 9.0 41.0 52-53 32.14206488804218 37.0 31.0 40.0 8.0 41.0 54-55 31.85607329280409 36.0 30.0 39.5 7.5 41.0 56-57 31.535650381950074 36.0 30.0 39.0 6.5 41.0 58-59 31.199185605981512 35.5 29.5 39.0 2.0 40.0 60-61 30.86484707760073 35.0 29.0 39.0 2.0 40.0 62-63 30.53762324965651 35.0 28.5 39.0 2.0 40.0 64-65 30.13144978536308 35.0 28.0 38.0 2.0 40.0 66-67 29.698071703575913 34.0 28.0 38.0 2.0 40.0 68-69 29.247611127330735 34.0 28.0 37.0 2.0 39.5 70-71 28.815560313031632 34.0 26.5 36.5 2.0 39.0 72-73 28.36760810529149 34.0 26.0 36.0 2.0 39.0 74-75 27.92178480271133 33.0 26.0 35.5 2.0 38.5 76-77 26.489398375008495 31.5 24.5 34.0 2.0 36.0 78-79 27.322377934861386 33.0 26.0 35.0 2.0 37.0 80-81 27.33979072757873 33.0 26.0 35.0 2.0 37.0 82-83 26.987634316546462 33.0 25.0 35.0 2.0 36.0 84-85 26.656325610301963 33.0 25.0 35.0 2.0 36.0 86-87 26.10842420015619 32.0 24.0 35.0 2.0 35.0 88-89 25.727420222529908 32.0 22.0 35.0 2.0 35.0 90-91 25.348131897586278 32.0 20.0 34.5 2.0 35.0 92-93 25.021686738297095 32.0 19.0 34.0 2.0 35.0 94-95 24.623518261127728 32.0 16.5 34.0 2.0 35.0 96-97 24.080263046496505 31.0 4.5 34.0 2.0 35.0 98-99 23.45626395462689 31.0 2.0 34.0 2.0 35.0 100-101 21.24976622855956 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57114.0 3 26123.0 4 14255.0 5 10237.0 6 8848.0 7 8963.0 8 10194.0 9 11868.0 10 13637.0 11 15049.0 12 16979.0 13 18508.0 14 20175.0 15 21832.0 16 23699.0 17 24316.0 18 23273.0 19 22657.0 20 22638.0 21 23721.0 22 25737.0 23 28856.0 24 33731.0 25 39427.0 26 46499.0 27 55768.0 28 65561.0 29 76822.0 30 90654.0 31 107425.0 32 127786.0 33 156263.0 34 194345.0 35 251625.0 36 329404.0 37 377598.0 38 216153.0 39 16243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.31757684743248 19.321216353396828 14.059507767182676 24.30169903198802 2 15.95302627237913 20.409926715548277 38.61308140561272 25.023965606459875 3 19.45586295458981 24.426933390238144 29.11394808246236 27.00325557270969 4 13.80612075580881 16.41184084774279 35.89491914009149 33.88711925635691 5 14.277399322501353 37.306923896444914 34.02407010994735 14.391606671106377 6 33.813761723126696 35.279219071393065 16.78605797370249 14.120961231777752 7 29.437159487953522 31.670462278964195 20.51459378077202 18.37778445231025 8 26.890108169092898 34.923913671515066 19.49366251364658 18.69231564574546 9 26.760964456216886 15.928415902828972 19.290645106223785 38.01997453473036 10-11 25.827616974331736 25.59580155246777 27.23346595222869 21.343115520971807 12-13 26.41682914049807 22.716378749544123 27.350204005303812 23.51658810465399 14-15 23.399447533236852 24.369903769678185 24.82962757430602 27.401021122778946 16-17 23.512943909566918 27.430963757813025 25.681757526196968 23.37433480642309 18-19 23.458278746576614 26.501009158416593 27.190683066504146 22.850029028502647 20-21 24.209811096028908 25.70403170858245 27.040218338322614 23.045938857066027 22-23 23.86281488996484 25.498575579766108 26.970435324481883 23.668174205787164 24-25 23.620651274597922 25.879090029850655 26.841087995234837 23.65917070031659 26-27 23.410751316423568 25.986479506987713 26.86957220436767 23.733196972221045 28-29 23.512372854125545 26.16953694802805 26.701402749286814 23.616687448559592 30-31 23.776729536461765 26.026777432646764 26.50072655996783 23.695766470923648 32-33 23.49511786676004 25.90218491626763 26.608456920806734 23.994240296165597 34-35 23.8229527768506 26.054108838159163 26.524236614335734 23.598701770654504 36-37 24.04457422591406 25.760699771827568 26.53341386552428 23.661312136734093 38-39 23.832295327206445 25.8474539258583 26.54592906517164 23.774321681763613 40-41 23.93323659679281 25.791250343204585 26.617447742710677 23.65806531729193 42-43 23.836040824432082 25.741726498783613 26.498384922040735 23.92384775474357 44-45 23.65822967718219 25.786632605029762 26.649268750150718 23.905868967637332 46-47 23.843309260058213 25.830531789483917 26.396486689311953 23.929672261145914 48-49 23.72742769239298 25.790850658410193 26.38804539796308 24.093676251233752 50-51 23.657649249126553 25.97176492567209 26.433008433917475 23.937577391283877 52-53 23.850482193029084 25.72359328726555 26.468087933783885 23.957836585921484 54-55 23.40530193074148 25.7031229383221 26.621742537046366 24.269832593890058 56-57 23.46910978086654 25.87740804673308 26.41069551567353 24.24278665672685 58-59 23.389512873987663 25.619457552497703 26.504312843766055 24.48671672974858 60-61 23.33602191574408 25.684126503118833 26.733490091358636 24.24636148977845 62-63 23.18894947783249 25.726837923510608 26.73288059641138 24.351332002245524 64-65 23.029551834075676 25.70817445199464 26.525308311745217 24.736965402184467 66-67 23.099293766078933 25.838070013420516 26.352292017632966 24.71034420286759 68-69 23.427537835858256 25.462214491387837 26.401377870286012 24.70886980246789 70-71 23.112302982386986 25.401857830617068 26.35274098748611 25.133098199509835 72-73 23.043109579558394 25.436351671767447 26.325283185849113 25.195255562825047 74-75 23.02949228223629 25.5694775426499 26.249497233430176 25.151532941683634 76-77 23.120756429392976 25.27651170290796 26.442074339603614 25.16065752809545 78-79 23.101552831964426 25.34975669677545 26.337255846629485 25.211434624630634 80-81 23.090121209888927 25.373709289922918 26.261566695056942 25.27460280513121 82-83 23.078157096371225 25.308770650840838 26.303010627755185 25.31006162503275 84-85 22.957450791359314 25.270757163203832 26.194595070763466 25.577196974673388 86-87 22.993203855411416 25.20912531609532 26.259642715230274 25.53802811326299 88-89 22.932494399809304 25.08335345225398 26.133083604047417 25.851068543889298 90-91 22.770380820630812 25.114202792182134 26.17025504528902 25.945161341898036 92-93 22.898418096358927 24.863425036070115 26.17414084165762 26.064016025913332 94-95 22.598596252243304 24.84087581042761 26.30369836318015 26.25682957414893 96-97 22.744697895863865 24.53858595369534 26.333783876136163 26.382932274304633 98-99 22.593546469169286 24.501521797689843 26.285289276342628 26.619642456798235 100-101 22.7067738256328 24.368755324916737 26.356553387368425 26.567917462082036 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 74.0 1 55.0 2 42.0 3 63.5 4 71.5 5 65.0 6 120.0 7 263.5 8 406.5 9 458.0 10 409.0 11 356.0 12 360.0 13 413.0 14 480.0 15 486.0 16 514.0 17 646.0 18 770.0 19 834.0 20 943.5 21 1159.0 22 1392.0 23 1664.0 24 2170.0 25 2788.5 26 3558.5 27 4753.0 28 6327.0 29 8663.5 30 12288.0 31 17365.5 32 23825.0 33 29251.0 34 34084.5 35 40272.5 36 48089.0 37 55201.0 38 61137.0 39 66553.5 40 71879.5 41 77409.5 42 82704.5 43 88787.5 44 94638.5 45 100343.5 46 104273.0 47 106528.5 48 110338.5 49 112992.0 50 112696.0 51 111518.0 52 109885.0 53 109949.0 54 109296.0 55 104166.5 56 96364.5 57 88264.0 58 80589.0 59 70915.5 60 59287.5 61 48842.5 62 39720.5 63 30465.5 64 22576.0 65 17133.0 66 12677.5 67 9055.5 68 6355.5 69 4512.0 70 3342.5 71 2454.0 72 1749.5 73 1345.5 74 1007.5 75 692.0 76 425.0 77 221.0 78 120.5 79 67.0 80 29.5 81 12.0 82 8.5 83 3.5 84 1.5 85 1.5 86 0.5 87 0.5 88 0.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18147421604467456 2 0.0 3 0.013098034421634461 4 0.013439722276111881 5 0.0067198611380559405 6 0.10854284177232731 7 0.14248383531708442 8 0.12479199751858688 9 0.14176249429096544 10-11 0.11429458732269723 12-13 0.11566133874060691 14-15 0.11600302659508432 16-17 0.0668379408674999 18-19 0.07923361692159744 20-21 0.038155143749978644 22-23 0.08392233359137094 24-25 0.05865641501862389 26-27 0.06668607959884328 28-29 0.0410784731716188 30-31 0.025949294281701896 32-33 0.03270712073692199 34-35 0.02088092444028682 36-37 0.02534184920707537 38-39 0.033789132276100496 40-41 0.02710723645520871 42-43 0.01381937544775346 44-45 0.027240115065283264 46-47 0.034586403936547806 48-49 0.009586242583949859 50-51 0.017084392723871036 52-53 0.006947653041040887 54-55 0.013572600886186434 56-57 0.004992439207086758 58-59 0.004024323619400733 60-61 0.023728323227598658 62-63 0.011294681856336962 64-65 0.007744924701488203 66-67 0.04075576797572346 68-69 0.09056626409509856 70-71 0.022361571809688976 72-73 0.04614684301303387 74-75 0.0871114202331602 76-77 0.2319870705315866 78-79 0.07904379033577666 80-81 0.01716032335819935 82-83 0.011883144272381409 84-85 0.01328786100745525 86-87 0.2509887117722476 88-89 0.6156076178168196 90-91 0.2686805495707451 92-93 0.3505717386938336 94-95 0.0012908207835813671 96-97 0.004669734011191416 98-99 0.0034738265205204433 100-101 0.005277179085817942 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2633983.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.01762492991537 #Duplication Level Percentage of deduplicated Percentage of total 1 68.9464519949199 31.038055161557192 2 12.81938919929747 11.541969096091634 3 5.96632905861819 8.057698913079864 4 3.4673397595527575 6.243656032005159 5 2.211802171963108 4.978504029830369 6 1.4666822190971252 3.961593001841421 7 1.0679872690001564 3.3654775214041566 8 0.7582815178327724 2.730882636886615 9 0.563040759127408 2.2812081943187232 >10 2.6047573486271047 19.39169221666543 >50 0.09290301888838162 2.8482843327812866 >100 0.03198276650282473 2.387168979832899 >500 0.0021200809533965157 0.6366297076390465 >1k 9.32835619479847E-4 0.5371801760662689 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 3.796531716415785E-5 0.0 16-17 0.0 0.0 0.0 3.796531716415785E-5 0.0 18-19 0.0 0.0 0.0 3.796531716415785E-5 0.0 20-21 0.0 0.0 0.0 1.1389595149247355E-4 0.0 22-23 0.0 0.0 0.0 4.1761848880573636E-4 0.0 24-25 0.0 0.0 0.0 0.0010060809048501832 0.0 26-27 0.0 0.0 0.0 0.002069109785446603 0.0 28-29 0.0 0.0 0.0 0.006928670382458809 3.796531716415785E-5 30-31 0.0 0.0 0.0 0.025607606427224473 3.796531716415785E-5 32-33 0.0 0.0 0.0 0.06649625301302249 3.796531716415785E-5 34-35 0.0 0.0 0.0 0.12139410163239474 3.796531716415785E-5 36-37 0.0 0.0 0.0 0.21452302463607398 3.796531716415785E-5 38-39 0.0 0.0 0.0 0.37249670935613477 3.796531716415785E-5 40-41 0.0 0.0 0.0 0.5511045439549154 3.796531716415785E-5 42-43 0.0 0.0 0.0 0.7321611415107843 3.796531716415785E-5 44-45 0.0 0.0 0.0 0.9495125822755879 5.6947975746236774E-5 46-47 0.0 0.0 0.0 1.2122325770515605 7.59306343283157E-5 48-49 0.0 0.0 0.0 1.5027431839916963 1.1389595149247355E-4 50-51 0.0 0.0 0.0 1.818045143040027 1.518612686566314E-4 52-53 0.0 0.0 0.0 2.1293607437861217 1.518612686566314E-4 54-55 0.0 0.0 0.0 2.4742946328810778 1.518612686566314E-4 56-57 0.0 0.0 0.0 2.8780557809218967 1.518612686566314E-4 58-59 0.0 0.0 0.0 3.317314500511203 1.518612686566314E-4 60-61 0.0 0.0 0.0 3.7952978436079503 1.518612686566314E-4 62-63 0.0 0.0 0.0 4.274970643318502 1.518612686566314E-4 64-65 0.0 0.0 0.0 4.775657246079417 1.518612686566314E-4 66-67 0.0 0.0 0.0 5.358823500379463 1.518612686566314E-4 68-69 1.8982658582078926E-5 0.0 0.0 5.997381152422016 1.518612686566314E-4 70-71 3.796531716415785E-5 0.0 0.0 6.681554133037306 1.518612686566314E-4 72-73 3.796531716415785E-5 0.0 0.0 7.379983090247736 1.518612686566314E-4 74-75 3.796531716415785E-5 0.0 0.0 8.082056717905925 1.518612686566314E-4 76-77 3.796531716415785E-5 0.0 0.0 8.843280309705872 1.8982658582078927E-4 78-79 3.796531716415785E-5 0.0 0.0 9.682902281449804 1.8982658582078927E-4 80-81 3.796531716415785E-5 0.0 0.0 10.571879165507141 1.8982658582078927E-4 82-83 3.796531716415785E-5 0.0 0.0 11.47748485848238 1.8982658582078927E-4 84-85 3.796531716415785E-5 0.0 0.0 12.381609904088219 1.8982658582078927E-4 86-87 3.796531716415785E-5 0.0 0.0 13.30568572386382 2.0880924440286818E-4 88-89 3.796531716415785E-5 0.0 0.0 14.29117044415245 2.2779190298494713E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3580 0.0 40.77782 1 GTATCAA 5910 0.0 35.080654 1 TCAACGC 7120 0.0 28.93795 4 ATCAACG 7190 0.0 28.788273 3 CAACGCA 7190 0.0 28.586927 5 TATCAAC 7380 0.0 28.367676 2 AACGCAG 7440 0.0 27.690145 6 GTACATG 9845 0.0 24.295225 1 TACATGG 9980 0.0 23.30811 2 ACGCAGA 8855 0.0 23.104532 7 CGCAGAG 9160 0.0 22.021362 8 TAAGGTG 1310 0.0 21.741446 5 ACATGGG 10450 0.0 21.62463 3 CATGGGG 6450 0.0 19.578524 4 GTAAGGT 1095 0.0 19.076406 4 GCAGAGT 10145 0.0 18.900793 9 TAAGGCG 920 0.0 18.574757 5 GTATATA 835 0.0 17.084545 1 AGAGTAC 8765 0.0 17.028082 10-11 ACCGTGC 540 0.0 16.699772 8 >>END_MODULE