##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920865_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3870154 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.40167703920826 31.0 28.0 33.0 18.0 34.0 2 28.433268805324026 31.0 28.0 33.0 16.0 34.0 3 28.503060084947524 31.0 28.0 34.0 16.0 34.0 4 31.958062392349245 35.0 32.0 37.0 20.0 37.0 5 31.91594184624178 35.0 32.0 37.0 20.0 37.0 6 32.038541877144944 35.0 32.0 37.0 22.0 37.0 7 31.86860057765143 35.0 32.0 37.0 19.0 37.0 8 31.797817089449154 35.0 32.0 37.0 19.0 37.0 9 33.03153259534375 37.0 32.0 39.0 18.0 39.0 10-11 32.832797867991815 37.0 32.0 39.0 17.5 39.0 12-13 32.660672676074384 37.0 32.0 39.0 17.0 39.0 14-15 33.406753193800554 38.0 32.0 40.0 17.0 41.0 16-17 33.30069604465352 38.0 32.0 40.0 17.0 41.0 18-19 33.1771849388939 38.0 32.0 40.0 16.0 41.0 20-21 33.07507634063141 38.0 32.0 40.0 12.0 41.0 22-23 32.852657413632635 38.0 32.0 40.0 10.5 41.0 24-25 32.655787211568324 38.0 31.0 40.0 10.0 41.0 26-27 32.69045004410677 38.0 31.0 40.0 10.0 41.0 28-29 32.525514876152215 38.0 31.0 40.0 9.0 41.0 30-31 32.27401584019654 37.0 30.5 40.0 8.0 41.0 32-33 32.030485996164494 37.0 30.0 40.0 8.0 41.0 34-35 31.70800593464756 37.0 30.0 40.0 4.0 41.0 36-37 31.408250550236502 37.0 30.0 40.0 2.0 41.0 38-39 31.20514442060962 37.0 30.0 40.0 2.0 41.0 40-41 31.00826969676142 36.0 29.5 40.0 2.0 41.0 42-43 30.768652358536634 36.0 29.0 39.5 2.0 41.0 44-45 30.48721885485694 36.0 28.0 39.0 2.0 40.0 46-47 30.237414325114713 35.5 28.0 39.0 2.0 40.0 48-49 29.93656660691022 35.0 27.0 39.0 2.0 40.0 50-51 28.804413080203012 34.0 25.5 38.0 2.0 39.5 52-53 29.261341150765574 34.5 26.5 38.5 2.0 39.5 54-55 29.907725506530234 35.0 28.0 39.0 2.0 40.0 56-57 29.85776793378248 35.0 28.0 39.0 2.0 40.0 58-59 29.612071509299113 35.0 27.5 39.0 2.0 40.0 60-61 29.28718133697005 35.0 27.0 39.0 2.0 40.0 62-63 28.895549892846642 34.0 26.0 38.0 2.0 40.0 64-65 28.466439319985717 34.0 26.0 38.0 2.0 40.0 66-67 28.078559793744642 34.0 25.5 37.5 2.0 40.0 68-69 27.636790680680924 34.0 24.5 37.0 2.0 39.5 70-71 27.30527854963911 33.0 24.0 36.0 2.0 39.0 72-73 26.847560200446804 33.0 22.5 36.0 2.0 39.0 74-75 26.412635388669287 33.0 22.0 35.0 2.0 38.5 76-77 25.998791262569913 32.0 20.5 35.0 2.0 37.0 78-79 25.556306932488994 32.0 19.5 35.0 2.0 37.0 80-81 25.118650058886544 32.0 17.5 35.0 2.0 36.0 82-83 24.65449850316034 31.5 12.5 35.0 2.0 36.0 84-85 24.267565709271516 31.0 7.0 34.0 2.0 35.0 86-87 23.82990444307901 31.0 3.5 34.0 2.0 35.0 88-89 23.316002024725634 31.0 2.0 34.0 2.0 35.0 90-91 22.839595142725585 30.5 2.0 34.0 2.0 35.0 92-93 22.316902764076055 30.0 2.0 34.0 2.0 35.0 94-95 21.697575212769312 30.0 2.0 34.0 2.0 35.0 96-97 21.066716595773705 29.0 2.0 34.0 2.0 35.0 98 20.676849034947963 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 212806.0 3 36192.0 4 26472.0 5 21346.0 6 20053.0 7 20114.0 8 23254.0 9 26449.0 10 28689.0 11 30427.0 12 31487.0 13 30965.0 14 28957.0 15 30320.0 16 32580.0 17 34939.0 18 36356.0 19 36115.0 20 37667.0 21 40042.0 22 43225.0 23 48234.0 24 54863.0 25 62939.0 26 73353.0 27 84209.0 28 97893.0 29 112278.0 30 131499.0 31 154311.0 32 183679.0 33 221389.0 34 274636.0 35 346512.0 36 433555.0 37 465833.0 38 270647.0 39 25868.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.51114073213489 17.65354812609566 13.046767216787861 24.78854392498159 2 16.07573492260198 19.21817596791138 39.16007737863714 25.5460117308495 3 19.679160941305017 23.195990984832843 28.611500411295683 28.513347662566456 4 13.542217981690827 15.135845744812816 35.811115337859626 35.51082093563673 5 14.822178516694104 36.53405111479248 33.7067399265506 14.93703044196282 6 34.31144129943682 34.106598416719066 17.035324413389787 14.546635870454322 7 30.044324697012065 31.1092854968413 20.275344438971622 18.571045367175017 8 27.19611146714076 34.10766336592727 19.587192235337895 19.109032931594072 9 27.00714235144131 15.882391243345872 19.180787121132646 37.92967928408017 10-11 26.05673470790431 24.986919121802163 27.134960814210707 21.82138535608282 12-13 26.609446496143118 22.308269534290243 27.12355980572429 23.95872416384235 14-15 23.74828344597873 23.84394148322412 24.60588539820888 27.801889672588274 16-17 23.858741406193072 26.927110976971726 25.32959184359026 23.884555773244944 18-19 23.959749992859486 26.122117122769918 26.64295456216764 23.275178322202965 20-21 24.736747789876095 25.342223994389744 26.36077641624285 23.56025179949131 22-23 24.39009092948778 25.15649014634197 26.26648553617879 24.186933387991463 24-25 24.146635575610706 25.37745822602584 26.272998017725417 24.202908180638037 26-27 23.932428153780975 25.576862238146745 26.2762709767352 24.214438631337075 28-29 24.123017015879388 25.6905704551718 26.133650841745443 24.05276168720337 30-31 24.304127449122646 25.586430947350408 25.87074386942183 24.238697734105116 32-33 24.027714012622724 25.615510522747353 25.822632955247784 24.534142509382146 34-35 24.374096594172993 25.579177752938076 25.91545987893066 24.131265773958273 36-37 24.567684523631776 25.201132673688964 25.91806422379264 24.31311857888662 38-39 24.249650384499187 25.50116746141252 25.87826943701263 24.37091271707567 40-41 24.42858390665621 25.392277704541904 26.06803923250768 24.111099156294205 42-43 24.318767880989117 25.20978501171288 25.890608496529723 24.58083861076828 44-45 24.22907808933251 25.287175050362876 25.99278053252035 24.490966327784264 46-47 24.338481610547465 25.324076896041458 25.858090152995782 24.479351340415295 48-49 24.127357646422933 25.371481199259478 25.849676033536273 24.651485120781317 50-51 24.093222759920373 25.515714541541474 25.988724375067996 24.402338323470154 52-53 24.2277268999267 25.33266744699411 26.03803726498215 24.401568388097036 54-55 23.89782498039772 25.219271128586684 26.227067795803066 24.65583609521253 56-57 23.84452752790836 25.337915534963262 26.200152569984443 24.617404367143934 58-59 23.892737326990513 25.112838689536897 26.18604645733659 24.808377526135995 60-61 23.764743209662914 25.102010876058 26.426086558354033 24.70715935592505 62-63 23.718386752176933 25.13248095414041 26.373491696182892 24.77564059749977 64-65 23.650601080842616 25.09999416111432 26.27711351442529 24.97229124361777 66-67 23.605197613767555 25.0758805098049 26.23268517595661 25.08623670047093 68-69 23.71321850888006 24.874511274918753 26.288052591384325 25.124217624816858 70-71 23.49455059065628 24.762224447053047 26.416689550270416 25.326535412020256 72-73 23.4413074131243 24.743190318980563 26.429932871237305 25.385569396657836 74-75 23.443501708499177 24.957593732206508 26.365947135096444 25.232957424197867 76-77 23.393115115054396 24.614737756749687 26.565046451289458 25.427100676906456 78-79 23.30499308461986 24.651570732913644 26.59427994179442 25.449156240672078 80-81 23.40751262892234 24.6044553725793 26.586738260699015 25.401293737799346 82-83 23.34518318224506 24.44073141977177 26.749578882078556 25.464506515904617 84-85 23.189940625528624 24.476164983385388 26.684265343806125 25.649629047279866 86-87 23.21644322658895 24.47981133205263 26.775832129489917 25.5279133118685 88-89 23.090219205697984 24.177534547244324 26.846727162539892 25.8855190845178 90-91 23.075067296953762 24.222793914138617 26.894085970278503 25.80805281862912 92-93 23.21269437013131 24.044194953366464 26.94538640187786 25.79772427462436 94-95 23.057301127609946 23.865257176916423 27.112727680000248 25.964714015473376 96-97 23.199956962819506 23.621073181355047 27.16567758929567 26.013292266529774 98 23.14184674245867 23.58754583179837 27.083011973885434 26.187595451857526 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 43.0 2 71.0 3 116.0 4 129.5 5 138.0 6 219.5 7 464.5 8 780.5 9 914.5 10 937.5 11 1078.0 12 1288.5 13 1481.0 14 1661.5 15 1815.0 16 1932.5 17 1991.5 18 1991.5 19 2018.5 20 2025.0 21 2053.0 22 2206.5 23 2451.0 24 2812.0 25 3422.0 26 4308.0 27 5483.0 28 7464.5 29 10851.5 30 15799.5 31 22213.0 32 29249.5 33 36973.0 34 46292.5 35 57194.0 36 69140.0 37 80222.0 38 89696.5 39 98900.0 40 108416.5 41 117608.5 42 127861.0 43 137997.5 44 146519.5 45 155700.5 46 164711.5 47 171860.5 48 175883.5 49 176032.5 50 175203.0 51 174762.5 52 174062.0 53 172792.0 54 168480.5 55 161110.5 56 148533.0 57 134314.0 58 122522.5 59 107814.5 60 91775.5 61 77006.5 62 62625.0 63 48145.0 64 35313.5 65 26284.5 66 19979.5 67 15227.0 68 11182.0 69 7998.5 70 5729.0 71 4154.0 72 3129.0 73 2240.0 74 1557.5 75 1068.5 76 722.5 77 465.5 78 265.5 79 137.5 80 77.0 81 59.0 82 39.5 83 26.5 84 19.5 85 16.5 86 17.5 87 14.5 88 9.0 89 6.0 90 6.5 91 8.0 92 5.0 93 2.0 94 2.0 95 3.0 96 2.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.36262122902602845 2 0.022453886847913548 3 0.017441166423868403 4 0.01596835681474174 5 0.021291142419655653 6 0.021885434016320798 7 0.013642867958225951 8 0.008113372232732858 9 0.0 10-11 2.5838765072397636E-5 12-13 0.0049093653637555515 14-15 0.00306189366107912 16-17 0.005581173255637889 18-19 0.03577377024273452 20-21 0.07622435696357303 22-23 0.09551299509011786 24-25 0.06136706704694438 26-27 0.07091449074119531 28-29 0.05477818195348299 30-31 0.04860271710117996 32-33 0.018177571228431735 34-35 0.3237597263571424 36-37 0.49323618646699846 38-39 0.44830257400609896 40-41 0.45697147968788837 42-43 0.40957026516257494 44-45 0.3845712599550302 46-47 0.3829046596078606 48-49 0.37486880367034486 50-51 0.369869002628836 52-53 0.43004748648245006 54-55 0.4301766803078121 56-57 0.40126310219179906 58-59 0.38712929769719756 60-61 0.4015473286075955 62-63 0.3821165772731524 64-65 0.43096476264252015 66-67 0.44923276954870534 68-69 0.39342103699232644 70-71 0.35350014495547205 72-73 0.3401285840305063 74-75 0.3237209682095338 76-77 0.32187349650685737 78-79 0.321653867003742 80-81 0.3368212221012394 82-83 0.33232527697864217 84-85 0.3321960831532802 86-87 0.31965136271063116 88-89 0.3594947384522683 90-91 0.34059368180180943 92-93 0.33049072465850193 94-95 0.33625276926964665 96-97 0.3365240763029068 98 0.33184725982480284 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3870154.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.48483043784393 #Duplication Level Percentage of deduplicated Percentage of total 1 75.74361668347261 41.26878111748052 2 11.84768755186038 12.910384946873341 3 4.679835283992228 7.649400957760672 4 2.453974621509339 5.348175646068343 5 1.4176252253816122 3.8619535014663713 6 0.8973514227615175 2.933522406739157 7 0.5930845328331414 2.261987714470512 8 0.3981498211736995 1.7354500396405521 9 0.3117272624155304 1.5285966332007108 >10 1.5538986639441528 14.763747886085154 >50 0.07816969389919204 2.8794670676092364 >100 0.023494645113104833 2.1472441125593327 >500 9.071462757809346E-4 0.3360167876521962 >1k 4.774453677266318E-4 0.3752711823939413 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0671012057918108E-4 2 0.0 2.5838765072397636E-5 0.0 0.0 2.0671012057918108E-4 3 0.0 2.5838765072397636E-5 0.0 0.0 2.0671012057918108E-4 4 0.0 2.5838765072397636E-5 0.0 2.5838765072397636E-5 2.0671012057918108E-4 5 0.0 1.2919382536198817E-4 0.0 2.5838765072397636E-5 2.0671012057918108E-4 6 0.0 1.2919382536198817E-4 0.0 2.5838765072397636E-5 2.5838765072397634E-4 7 0.0 1.2919382536198817E-4 0.0 2.5838765072397636E-5 2.5838765072397634E-4 8 0.0 1.2919382536198817E-4 0.0 2.5838765072397636E-5 2.5838765072397634E-4 9 0.0 1.2919382536198817E-4 0.0 7.75162952171929E-5 2.5838765072397634E-4 10-11 0.0 1.2919382536198817E-4 0.0 7.75162952171929E-5 2.5838765072397634E-4 12-13 0.0 1.2919382536198817E-4 0.0 1.0335506028959054E-4 6.718078918823386E-4 14-15 0.0 1.4211320789818697E-4 0.0 1.2919382536198817E-4 8.139210997805255E-4 16-17 0.0 1.550325904343858E-4 0.0 1.2919382536198817E-4 8.785180124615197E-4 18-19 0.0 1.550325904343858E-4 0.0 1.4211320789818697E-4 9.560343076787125E-4 20-21 0.0 1.8087135550678345E-4 0.0 1.9379073804298225E-4 0.0011627444282578936 22-23 0.0 1.9379073804298225E-4 0.0 3.488233284773681E-4 0.0011627444282578936 24-25 0.0 2.0671012057918108E-4 0.0 7.493241870995314E-4 0.0011627444282578936 26-27 0.0 2.0671012057918108E-4 0.0 0.0016795197297058463 0.0012144219584026888 28-29 0.0 2.0671012057918108E-4 0.0 0.006911869656866368 0.0012531801060112853 30-31 2.5838765072397636E-5 2.5838765072397634E-4 0.0 0.028370964049492603 0.0012790188710836829 32-33 2.5838765072397636E-5 2.5838765072397634E-4 0.0 0.07656026090951419 0.00142113207898187 34-35 2.5838765072397636E-5 2.5838765072397634E-4 0.0 0.14282377393767792 0.0014986483741990628 36-37 2.5838765072397636E-5 2.5838765072397634E-4 0.0 0.24869811382182727 0.0015503259043438582 38-39 2.5838765072397636E-5 2.5838765072397634E-4 0.0 0.4250606048234773 0.0017182778773144427 40-41 2.5838765072397636E-5 2.84226415796374E-4 0.0 0.6299103343174457 0.0017311972598506415 42-43 2.5838765072397636E-5 3.100651808687716E-4 0.0 0.8469430415430497 0.0017570360249230393 44-45 2.5838765072397636E-5 3.359039459411693E-4 0.0 1.103496139946886 0.0017957941725316358 46-47 2.5838765072397636E-5 3.359039459411693E-4 0.0 1.406701128688936 0.0018345523201402322 48-49 2.5838765072397636E-5 3.359039459411693E-4 0.0 1.7302799836905716 0.0019249879978936238 50-51 2.5838765072397636E-5 3.8758147608596456E-4 0.0 2.0822168833591634 0.001989584910574618 52-53 2.5838765072397636E-5 4.0050085862216336E-4 0.0 2.4378099682854995 0.0021704562660814016 54-55 2.5838765072397636E-5 5.296946839841515E-4 0.0 2.833233509570937 0.002196295031153799 56-57 2.5838765072397636E-5 5.942915966651456E-4 0.0 3.2971556170633 0.0022996500914433896 58-59 2.5838765072397636E-5 6.45969126809941E-4 0.0 3.789487446752765 0.002351327621588185 60-61 5.167753014479527E-5 6.45969126809941E-4 0.0 4.314453636728668 0.002364247004124384 62-63 5.167753014479527E-5 6.718078918823386E-4 0.0 4.850956835309396 0.002532198977094968 64-65 5.167753014479527E-5 7.880823347081279E-4 0.0 5.4223165279727885 0.0025709571247035648 66-67 6.459691268099408E-5 8.52679247389122E-4 0.0 6.069228769707872 0.002674312184993155 68-69 7.75162952171929E-5 8.785180124615197E-4 0.0 6.770479934390208 0.0027776672452827457 70-71 7.75162952171929E-5 9.301955426063149E-4 0.0 7.508887243246651 0.0028164253928913423 72-73 7.75162952171929E-5 9.818730727511101E-4 0.0 8.259619643042628 0.0030231355134705236 74-75 7.75162952171929E-5 9.818730727511101E-4 0.0 9.035053902247817 0.0032686037816583007 76-77 7.75162952171929E-5 9.818730727511101E-4 0.0 9.868857931751553 0.0033073619292668974 78-79 7.75162952171929E-5 9.818730727511101E-4 0.0 10.783588973462038 0.003397797607020289 80-81 7.75162952171929E-5 9.818730727511101E-4 1.2919382536198818E-5 11.720257126718987 0.0034365557546288854 82-83 7.75162952171929E-5 9.818730727511101E-4 2.5838765072397636E-5 12.686058487595067 0.0035915883450632715 84-85 7.75162952171929E-5 9.818730727511101E-4 2.5838765072397636E-5 13.656291196681064 0.0035915883450632715 86 7.75162952171929E-5 9.818730727511101E-4 2.5838765072397636E-5 14.398445126473003 0.0035915883450632715 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7190 0.0 34.246178 1 GGTATCA 4500 0.0 32.319286 1 TCAACGC 8775 0.0 28.223436 4 TATCAAC 8915 0.0 27.729132 2 ATCAACG 8950 0.0 27.466606 3 CAACGCA 9055 0.0 27.300053 5 AACGCAG 9470 0.0 26.292658 6 GTACATG 13185 0.0 25.726135 1 TACATGG 13450 0.0 24.381062 2 ACATGGG 13915 0.0 23.269375 3 ACGCAGA 11335 0.0 21.193869 7 TAAGGCG 1070 0.0 20.574093 5 GTATAGG 855 0.0 20.455244 1 CATGGGG 9750 0.0 20.226795 4 CGCAGAG 12030 0.0 19.740282 8 GAGTACA 9915 0.0 18.521126 1 CGCCGTA 625 0.0 17.66829 92 GCAGAGT 13015 0.0 17.15434 9 AGAGTAC 10105 0.0 16.808971 10-11 AGTACAT 10020 0.0 16.798372 2 >>END_MODULE