##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920863_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3298868 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.454425578713668 31.0 28.0 31.0 20.0 34.0 2 28.484682018195333 31.0 28.0 33.0 16.0 34.0 3 28.556986517799437 31.0 28.0 34.0 18.0 34.0 4 32.019745864338915 35.0 32.0 37.0 22.0 37.0 5 31.978576893649578 35.0 32.0 37.0 22.0 37.0 6 32.10312204065152 35.0 32.0 37.0 23.0 37.0 7 31.934019791031346 35.0 32.0 37.0 21.0 37.0 8 31.875581866264426 35.0 32.0 37.0 19.0 37.0 9 33.118017453259725 37.0 32.0 39.0 19.0 39.0 10-11 32.92278987822489 37.0 32.0 39.0 18.0 39.0 12-13 32.754849693895 37.0 32.0 39.0 17.0 39.0 14-15 33.49622082484052 38.0 32.0 40.0 17.0 41.0 16-17 33.38357976129994 38.0 32.0 40.0 17.0 41.0 18-19 33.27300061718141 38.0 32.0 40.0 17.0 41.0 20-21 33.18402721782138 38.0 32.0 40.0 16.0 41.0 22-23 32.9666484078781 38.0 32.0 40.0 13.0 41.0 24-25 32.787795692340524 38.0 31.5 40.0 10.5 41.0 26-27 32.81754529129387 38.0 32.0 40.0 10.0 41.0 28-29 32.659349207061325 38.0 31.0 40.0 10.0 41.0 30-31 32.420253250508964 37.0 31.0 40.0 9.0 41.0 32-33 32.183382602759494 37.0 30.0 40.0 8.5 41.0 34-35 31.86204146392035 37.0 30.0 40.0 5.0 41.0 36-37 31.566178458792532 37.0 30.0 40.0 2.0 41.0 38-39 31.369961605011174 37.0 30.0 40.0 2.0 41.0 40-41 31.18051813531187 36.5 30.0 40.0 2.0 41.0 42-43 30.957606215222917 36.0 29.0 39.5 2.0 41.0 44-45 30.685069090366756 36.0 29.0 39.0 2.0 40.0 46-47 30.456976605308242 36.0 28.0 39.0 2.0 40.0 48-49 30.16352124425712 35.5 28.0 39.0 2.0 40.0 50-51 29.05379512002299 34.0 25.5 38.0 2.0 39.5 52-53 29.524053705695408 34.5 27.5 38.5 2.0 39.5 54-55 30.188255941128894 36.0 28.0 39.0 2.0 40.0 56-57 30.153240141769842 36.0 28.0 39.0 2.0 41.0 58-59 29.928202037789934 35.0 28.0 39.0 2.0 40.5 60-61 29.610277070801256 35.0 27.5 39.0 2.0 40.0 62-63 29.23048209264511 35.0 26.5 39.0 2.0 40.0 64-65 28.818981693114125 34.0 26.0 38.0 2.0 40.0 66-67 28.445097833559878 34.0 26.0 38.0 2.0 40.0 68-69 28.000360881369005 34.0 25.5 37.0 2.0 40.0 70-71 27.67583364960344 34.0 25.0 37.0 2.0 39.0 72-73 27.215081052045733 33.0 24.0 36.0 2.0 39.0 74-75 26.772499687771685 33.0 22.5 36.0 2.0 39.0 76-77 26.345043815029882 33.0 21.5 35.0 2.0 37.5 78-79 25.879928357242544 32.0 20.0 35.0 2.0 37.0 80-81 25.42335416270066 32.0 18.5 35.0 2.0 36.5 82-83 24.94705138247423 32.0 17.0 35.0 2.0 36.0 84-85 24.547904917686914 31.0 10.5 34.5 2.0 36.0 86-87 24.092467325155177 31.0 6.0 34.0 2.0 35.0 88-89 23.56447408626232 31.0 2.0 34.0 2.0 35.0 90-91 23.06915281241929 31.0 2.0 34.0 2.0 35.0 92-93 22.536826723591243 30.0 2.0 34.0 2.0 35.0 94-95 21.90798692157431 30.0 2.0 34.0 2.0 35.0 96-97 21.27378179423972 29.0 2.0 34.0 2.0 35.0 98 20.882008313154696 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 172028.0 3 29336.0 4 21585.0 5 17377.0 6 16079.0 7 16192.0 8 18631.0 9 21439.0 10 23485.0 11 25114.0 12 26212.0 13 25484.0 14 24589.0 15 25911.0 16 27858.0 17 29731.0 18 30857.0 19 30635.0 20 32206.0 21 34071.0 22 37349.0 23 41622.0 24 47319.0 25 54113.0 26 62372.0 27 71556.0 28 83395.0 29 96175.0 30 111390.0 31 130826.0 32 155488.0 33 186995.0 34 232256.0 35 291066.0 36 364124.0 37 406332.0 38 251571.0 39 26096.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.29148021489223 18.02169913810072 12.63016638358549 25.056654263421564 2 15.968072768618532 19.600318362706084 39.31988629903354 25.11172256964184 3 19.511403880839474 23.42847406260242 29.09619995955501 27.963922097003096 4 13.186354421115535 15.413746173508445 36.79359032157233 34.60630908380369 5 14.212930327465006 36.76503805846495 34.63597733925775 14.386054274812285 6 33.66246903930193 35.00571383870814 17.260431886767453 14.071385235222472 7 29.072471000412627 31.46413922591164 21.082497652656173 18.380892121019556 8 26.353285422127314 34.6933034055033 20.066743426457634 18.886667745911755 9 26.415152106722672 15.913580052308854 19.63885793551 38.03240990545848 10-11 25.450324997897006 25.39312354921803 27.96461209793967 21.191939354945298 12-13 25.99368479831643 22.766920493393318 27.673903744709673 23.56549096358058 14-15 23.00851314986545 24.45929236241652 25.210236878554156 27.321957609163878 16-17 23.29065892058018 27.417271905460883 25.965380886640727 23.32668828731821 18-19 23.23008275945931 26.79110631852999 27.216995414516738 22.76181550749396 20-21 23.91745606270109 26.159248780943585 27.05119096517961 22.872104191175712 22-23 23.47946477754868 26.03275361874708 26.913847778763717 23.573933824940525 24-25 23.281109359443043 26.16412750626923 27.002334799123105 23.55242833516462 26-27 23.21157647000296 26.35766696035456 26.90705392416118 23.523702645481297 28-29 23.27717526881639 26.57596048639824 26.78848106323981 23.35838318154556 30-31 23.570093375746204 26.3425995357674 26.666367429171316 23.420939659315078 32-33 23.255364459436763 26.342577741988098 26.656892891511397 23.74516490706374 34-35 23.61908946877062 26.355168607320863 26.680280135384578 23.345461788523934 36-37 23.624562543920756 26.11321511065975 26.70619674489118 23.55602560052831 38-39 23.490504237770008 26.30690519096188 26.740250343030027 23.462340228238087 40-41 23.66441420489693 26.088412841940094 26.834567764396038 23.412605188766932 42-43 23.557690478599998 25.993080353576126 26.677664242685257 23.771564925138616 44-45 23.457900386928415 26.073516399119278 26.78091745486545 23.687665759086855 46-47 23.45648640618104 25.991555904667013 26.666526697517696 23.88543099163426 48-49 23.31013749403091 26.06476447904289 26.72023468958229 23.90486333734391 50-51 23.242461585923415 26.242265197194214 26.857276810902604 23.65799640597977 52-53 23.396066106554795 26.040087806805545 26.803283105104843 23.760562981534818 54-55 23.102539100850162 25.938452368304333 27.01213704027181 23.94687149057369 56-57 23.034701312945746 26.130287835238036 26.911880330708392 23.923130521107822 58-59 23.073509156218424 25.834014566756082 27.027979789542616 24.064496487482877 60-61 23.029207693217195 25.821242398608934 27.18406417618443 23.965485731989443 62-63 22.989698908974066 25.806935025291743 27.190328281475928 24.013037784258263 64-65 22.826875314602855 25.689340802469975 27.12672290488388 24.35706097804329 66-67 22.818007959733045 25.774164878096606 27.032583387353277 24.375243774817076 68-69 22.944435577091475 25.53881341833211 27.08983771425372 24.426913290322698 70-71 22.698413374390896 25.37235160613941 27.238345485224418 24.690889534245276 72-73 22.705526621501257 25.316556566536608 27.257982861394886 24.71993395056725 74-75 22.657202560070942 25.391201774588406 27.192535513587128 24.759060151753523 76-77 22.600851219629384 25.25744589105289 27.345202523492773 24.796500365824954 78-79 22.547251399889433 25.22212430446462 27.3671921991781 24.863432096467843 80-81 22.598919973047227 25.145427723185726 27.36903141098917 24.886620892777877 82-83 22.590142785064515 25.057791927164992 27.449120142429233 24.90294514534126 84-85 22.525593896240654 24.96413243059331 27.45925314862897 25.051020524537066 86-87 22.40897516967639 24.923358834522134 27.5564882222032 25.111177773598282 88-89 22.50003232216913 24.673329343129865 27.5512952824083 25.27534305229271 90-91 22.402667515041728 24.68479439780477 27.666906742209356 25.245631344944147 92-93 22.54137478371555 24.470923265265284 27.663303787827065 25.324398163192104 94-95 22.416826351576063 24.331646231408257 27.76692597944851 25.484601437567168 96-97 22.48527071710288 24.106693171062844 27.834755876506385 25.573280235327893 98 22.44576337577216 24.006259990316845 27.78478941567747 25.76318721823353 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 37.0 2 63.5 3 105.0 4 122.5 5 144.5 6 236.0 7 422.0 8 669.5 9 830.5 10 858.0 11 929.5 12 1085.5 13 1210.5 14 1366.5 15 1562.0 16 1629.0 17 1674.5 18 1711.0 19 1708.0 20 1742.5 21 1830.5 22 2056.0 23 2401.5 24 2907.0 25 3760.5 26 5175.0 27 7304.0 28 10443.5 29 14795.0 30 20814.0 31 28706.0 32 36233.5 33 43338.5 34 52291.5 35 62458.5 36 72899.5 37 82351.5 38 90224.5 39 97688.5 40 105295.0 41 112646.0 42 120289.0 43 127980.5 44 134990.0 45 141694.0 46 146472.5 47 148243.5 48 148916.0 49 147457.0 50 145531.0 51 144447.5 52 140853.0 53 136407.5 54 130231.0 55 121274.0 56 109632.0 57 97742.5 58 86777.5 59 73825.0 60 60537.5 61 48833.5 62 39630.5 63 30877.5 64 22560.5 65 16883.0 66 12775.0 67 9713.0 68 7327.5 69 5305.0 70 3794.5 71 2745.0 72 2072.5 73 1524.0 74 1100.0 75 806.0 76 537.0 77 327.0 78 184.0 79 104.0 80 60.5 81 40.0 82 35.0 83 26.5 84 14.0 85 15.0 86 11.0 87 6.5 88 5.5 89 5.0 90 6.5 91 6.0 92 4.5 93 4.0 94 3.0 95 0.5 96 1.0 97 2.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.358456294704729 2 0.022522877544660775 3 0.017005833516224353 4 0.014580759218010542 5 0.019794668959170238 6 0.022280370114839396 7 0.013913863786001743 8 0.008063372041560924 9 0.0 10-11 1.5156714363836321E-5 12-13 0.004880462025155296 14-15 0.0026978951567628653 16-17 0.00515328288370435 18-19 0.03572437575556221 20-21 0.07475291524244074 22-23 0.09335020376686791 24-25 0.06094514845698585 26-27 0.06925102792836815 28-29 0.05382149270598277 30-31 0.04845601582118472 32-33 0.01776366923441617 34-35 0.31701783763400054 36-37 0.48401451649474914 38-39 0.4405905298423581 40-41 0.44959361817447685 42-43 0.40303219164877163 44-45 0.37806908309153325 46-47 0.37678076237060715 48-49 0.36811112175449273 50-51 0.36435225659226134 52-53 0.4222357487477522 54-55 0.4233270321819485 56-57 0.3944534913188403 58-59 0.38041837381792787 60-61 0.39524164046575977 62-63 0.37649278479769427 64-65 0.423554382897406 66-67 0.4421819848505608 68-69 0.3874510892827479 70-71 0.34711907236057943 72-73 0.33428133529441006 74-75 0.31657829291744927 76-77 0.31556279305507223 78-79 0.3150777781954295 80-81 0.3302496492736296 82-83 0.32674844825558347 84-85 0.3252782469622913 86-87 0.3130922486137669 88-89 0.35316660139175016 90-91 0.3338721040065865 92-93 0.3232472472375372 94-95 0.3298858881288975 96-97 0.3292038359825249 98 0.3238686725264545 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3298868.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.081915027058706 #Duplication Level Percentage of deduplicated Percentage of total 1 75.95936279966868 44.87824618439549 2 12.332446843878692 14.572491530115183 3 4.863783043635309 8.62084849482331 4 2.426618166860324 5.734769933502346 5 1.3578428788727945 4.011197879482961 6 0.7647700604437431 2.711044783582547 7 0.5319302244731041 2.199921942585094 8 0.3615346612357848 1.7088128107575276 9 0.2626849682221059 1.3967937874245668 >10 1.0813542721665261 10.546070601687196 >50 0.04195195475714901 1.6917711511843143 >100 0.014842665953792442 1.485940560445281 >500 6.709986955917692E-4 0.28994929687036114 >1k 2.0646113634614394E-4 0.15214104314377588 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.0313428727672646E-5 2 0.0 0.0 0.0 0.0 3.0313428727672646E-5 3 0.0 0.0 0.0 0.0 3.0313428727672646E-5 4 0.0 0.0 0.0 0.0 3.0313428727672646E-5 5 3.0313428727672646E-5 0.0 0.0 3.0313428727672646E-5 3.0313428727672646E-5 6 3.0313428727672646E-5 0.0 0.0 3.0313428727672646E-5 3.0313428727672646E-5 7 3.0313428727672646E-5 0.0 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 8 3.0313428727672646E-5 0.0 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 9 3.0313428727672646E-5 0.0 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 10-11 3.0313428727672646E-5 0.0 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 12-13 3.0313428727672646E-5 0.0 3.0313428727672646E-5 9.094028618301794E-5 1.2125371491069058E-4 14-15 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 1.0609700054685427E-4 1.2125371491069058E-4 16-17 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 1.2125371491069058E-4 1.2125371491069058E-4 18-19 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 2.576641441852175E-4 1.6672385800219953E-4 20-21 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 3.486044303682354E-4 2.121940010937085E-4 22-23 3.0313428727672646E-5 3.0313428727672646E-5 3.0313428727672646E-5 4.69858145278926E-4 2.121940010937085E-4 24-25 4.547014309150897E-5 4.547014309150897E-5 3.0313428727672646E-5 8.94246147466343E-4 2.121940010937085E-4 26-27 6.062685745534529E-5 6.062685745534529E-5 3.0313428727672646E-5 0.0018491191523880314 2.576641441852175E-4 28-29 6.062685745534529E-5 6.062685745534529E-5 3.0313428727672646E-5 0.007578357181918161 2.728208585490538E-4 30-31 6.062685745534529E-5 7.578357181918161E-5 3.0313428727672646E-5 0.03266271945406728 2.879775729128901E-4 32-33 6.062685745534529E-5 9.094028618301794E-5 3.0313428727672646E-5 0.0856657495844029 3.3344771600439906E-4 34-35 6.062685745534529E-5 1.0609700054685427E-4 3.0313428727672646E-5 0.15881205310427698 3.3344771600439906E-4 36-37 6.062685745534529E-5 1.2125371491069058E-4 3.0313428727672646E-5 0.27661003714001287 3.3344771600439906E-4 38-39 9.094028618301794E-5 1.364104292745269E-4 3.0313428727672646E-5 0.4689335857027319 3.3344771600439906E-4 40-41 9.094028618301794E-5 1.5156714363836321E-4 3.0313428727672646E-5 0.6883876529767181 3.3344771600439906E-4 42-43 9.094028618301794E-5 1.5156714363836321E-4 3.0313428727672646E-5 0.920543046887599 3.3344771600439906E-4 44-45 9.094028618301794E-5 1.5156714363836321E-4 3.0313428727672646E-5 1.20101804619039 3.3344771600439906E-4 46-47 9.094028618301794E-5 1.6672385800219953E-4 3.0313428727672646E-5 1.5280544720188867 3.486044303682354E-4 48-49 9.094028618301794E-5 2.2735071545754485E-4 3.0313428727672646E-5 1.8802055735482597 3.940745734597444E-4 50-51 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 2.2573652537779623 4.24388002187417E-4 52-53 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 2.6452710444916256 4.3954471655125333E-4 54-55 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 3.0790258961558936 4.5470143091508964E-4 56-57 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 3.5831988427545447 4.5470143091508964E-4 58-59 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 4.124051038113681 4.8501485964276233E-4 60-61 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 4.694746804055209 5.15328288370435E-4 62-63 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 5.277507314630352 5.759551458257802E-4 64-65 9.094028618301794E-5 2.728208585490538E-4 3.0313428727672646E-5 5.895855790531782 5.759551458257802E-4 66-67 9.094028618301794E-5 3.486044303682354E-4 3.0313428727672646E-5 6.6026588514605615 5.911118601896165E-4 68-69 1.0609700054685427E-4 3.6376114473207175E-4 3.0313428727672646E-5 7.365632695821718 6.062685745534529E-4 70-71 1.2125371491069058E-4 3.7891785909590806E-4 3.0313428727672646E-5 8.168029154243213 6.214252889172892E-4 72-73 1.5156714363836321E-4 4.092312878235807E-4 3.0313428727672646E-5 8.989841363764782 6.820521463726345E-4 74-75 1.5156714363836321E-4 4.5470143091508964E-4 3.0313428727672646E-5 9.82665872050655 7.426790038279798E-4 76-77 1.5156714363836321E-4 4.5470143091508964E-4 3.0313428727672646E-5 10.72757382229298 8.033058612833251E-4 78-79 1.5156714363836321E-4 4.5470143091508964E-4 3.0313428727672646E-5 11.705575973333882 8.184625756471614E-4 80-81 1.5156714363836321E-4 4.5470143091508964E-4 3.0313428727672646E-5 12.712466821952258 8.48776004374834E-4 82-83 1.5156714363836321E-4 4.69858145278926E-4 3.0313428727672646E-5 13.733559511929547 9.094028618301793E-4 84-85 1.5156714363836321E-4 4.8501485964276233E-4 3.0313428727672646E-5 14.75363670204446 9.094028618301793E-4 86 1.5156714363836321E-4 4.8501485964276233E-4 3.0313428727672646E-5 15.552122728160084 9.094028618301793E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4670 0.0 41.589016 1 GGTATCA 2460 0.0 37.979042 1 TCAACGC 5260 0.0 35.49659 4 CAACGCA 5315 0.0 35.129265 5 ATCAACG 5485 0.0 34.20776 3 AACGCAG 5825 0.0 32.284943 6 TATCAAC 5940 0.0 31.743853 2 ACGCAGA 6875 0.0 27.148647 7 GTACATG 8500 0.0 25.827509 1 CGCAGAG 7270 0.0 25.29242 8 TACATGG 8535 0.0 24.833775 2 ACATGGG 8715 0.0 23.52979 3 GCAGAGT 8215 0.0 21.15431 9 CATGGGG 5885 0.0 20.65748 4 GTATAGC 1055 0.0 19.194786 1 GAGTACA 6190 0.0 18.21623 1 AGAGTAC 7315 0.0 17.364897 10-11 GTATTAG 1030 0.0 16.532845 1 CAGAGTA 7755 0.0 16.468351 10-11 GTATAGA 940 0.0 16.157314 1 >>END_MODULE