##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920863_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3298868 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.35996923793253 31.0 30.0 34.0 27.0 34.0 2 30.368876838964155 31.0 30.0 34.0 26.0 34.0 3 30.510163789518103 31.0 30.0 34.0 27.0 34.0 4 34.166061206450216 35.0 35.0 37.0 30.0 37.0 5 33.71801993896088 35.0 35.0 37.0 28.0 37.0 6 33.66808705289208 35.0 35.0 37.0 29.0 37.0 7 33.48978104004161 35.0 35.0 37.0 28.0 37.0 8 33.423267314727354 35.0 35.0 37.0 28.0 37.0 9 34.7644355578944 38.0 35.0 39.0 27.0 39.0 10-11 34.581972058293935 37.5 34.0 39.0 27.0 39.0 12-13 34.41590872990371 37.0 34.0 39.0 27.0 39.0 14-15 35.33689238247787 38.0 34.0 40.0 27.0 41.0 16-17 35.21767906445484 38.0 34.0 40.0 27.0 41.0 18-19 35.12857743929129 38.5 34.0 40.0 26.0 41.0 20-21 35.01680364294661 38.0 34.0 40.0 25.5 41.0 22-23 34.87960354885372 38.0 34.0 40.0 25.0 41.0 24-25 34.71947756018125 38.0 34.0 40.0 25.0 41.0 26-27 34.54467168737882 38.0 33.0 40.0 24.0 41.0 28-29 34.49209547032497 38.0 33.5 40.0 24.0 41.0 30-31 34.48698583877864 38.0 33.0 40.0 24.0 41.0 32-33 34.34937060227932 38.0 33.0 40.0 24.0 41.0 34-35 34.193849829699154 38.0 33.0 40.0 23.5 41.0 36-37 34.00797046138251 38.0 33.0 40.0 22.5 41.0 38-39 33.84078189851792 38.0 33.0 40.0 21.5 41.0 40-41 33.616582567110896 38.0 32.5 40.0 19.5 41.0 42-43 33.65900727158528 38.0 33.0 40.0 19.5 41.0 44-45 33.531634942653056 38.0 32.5 40.0 19.0 41.0 46-47 33.3130986144338 38.0 32.0 40.0 18.0 41.0 48-49 33.07428790724576 37.5 32.0 40.0 15.5 41.0 50-51 32.82538646590285 37.0 31.0 40.0 14.5 41.0 52-53 32.578419930715626 37.0 31.0 40.0 13.0 41.0 54-55 32.31617815565825 37.0 31.0 40.0 9.0 41.0 56-57 32.009658464661214 36.0 30.5 39.5 8.0 41.0 58-59 31.698592062489315 36.0 30.0 39.0 7.5 41.0 60-61 31.377493431079994 35.5 30.0 39.0 6.5 40.0 62-63 31.06600097366733 35.0 29.0 39.0 2.0 40.0 64-65 30.67417232214202 35.0 29.0 38.5 2.0 40.0 66-67 30.248335944329995 35.0 28.5 38.0 2.0 40.0 68-69 29.809113004824685 34.0 28.0 37.5 2.0 40.0 70-71 29.388447794819314 34.0 28.0 37.0 2.0 39.0 72-73 28.945476902986115 34.0 27.5 36.5 2.0 39.0 74-75 28.49529474959289 34.0 26.0 36.0 2.0 39.0 76-77 27.01417501397449 31.5 25.5 34.5 2.0 36.5 78-79 27.860657352764647 33.0 26.0 35.0 2.0 37.0 80-81 27.8820701525493 33.0 26.0 35.0 2.0 37.0 82-83 27.533349621749036 33.0 26.0 35.0 2.0 36.0 84-85 27.209245565448512 33.0 26.0 35.0 2.0 36.0 86-87 26.66051521309734 33.0 25.0 35.0 2.0 35.5 88-89 26.296727998816564 32.5 24.5 35.0 2.0 35.0 90-91 25.932321784321168 32.0 23.5 35.0 2.0 35.0 92-93 25.625093820061913 32.0 22.5 35.0 2.0 35.0 94-95 25.24454646260475 32.0 20.0 34.0 2.0 35.0 96-97 24.72624912545758 32.0 17.5 34.0 2.0 35.0 98-99 24.1396703353999 32.0 2.0 34.0 2.0 35.0 100-101 21.9509284700085 28.5 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 66848.0 3 31042.0 4 16606.0 5 12016.0 6 10118.0 7 10254.0 8 11429.0 9 13534.0 10 15452.0 11 17337.0 12 19615.0 13 21589.0 14 23230.0 15 24729.0 16 26179.0 17 27475.0 18 26960.0 19 26173.0 20 26379.0 21 27914.0 22 30351.0 23 34467.0 24 40175.0 25 47959.0 26 56848.0 27 67115.0 28 79461.0 29 93831.0 30 110053.0 31 131490.0 32 158319.0 33 191980.0 34 240102.0 35 310938.0 36 412634.0 37 499309.0 38 314002.0 39 24954.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.46178216089849 19.353663136374323 13.223199225955515 24.96135547677168 2 16.133018962868476 20.73102045913932 38.148237516626914 24.98772306136529 3 19.360140283094633 24.258497795798238 29.435074957412112 26.94628696369502 4 13.634776112887032 16.35520705495433 36.35336982726422 33.656647004894424 5 14.227248915922122 37.101352793380094 34.57026134280143 14.101136947896356 6 33.59949551382391 35.587943071721156 16.978035550737825 13.834525863717115 7 29.01134408718029 31.658257286653658 21.00773525343041 18.322663372735637 8 26.41708895952059 35.03899582118255 19.954369304509772 18.589545914787088 9 26.27861667333506 15.895500685154818 19.498801813884388 38.32708082762573 10-11 25.474782801871786 25.558681809863515 27.95610848206983 21.01042690619487 12-13 26.03436505170175 22.869832195980308 27.700083565894978 23.395719186422962 14-15 22.98424880571261 24.579929962656564 25.1126077081746 27.32321352345623 16-17 23.323134501873813 27.610223139188495 25.89607323502151 23.17056912391618 18-19 23.31848836463195 26.9117707065925 27.139989536367644 22.629751392407904 20-21 23.92671868598605 26.2305916901912 26.909399230536195 22.933290393286555 22-23 23.512599142359054 26.194319933932398 26.852401898290605 23.440679025417943 24-25 23.322737004331195 26.28658497468756 26.953879201242742 23.436798819738502 26-27 23.268117676358163 26.501660346520552 26.872587856401186 23.3576341207201 28-29 23.322962888383728 26.601070746672033 26.794989677065615 23.280976687878617 30-31 23.557917892453197 26.413330291133935 26.6675257595202 23.36122605689267 32-33 23.2631588682713 26.403445079900884 26.67574745561782 23.65764859620999 34-35 23.608249501282742 26.41671099624751 26.63202465942527 23.34301484304448 36-37 23.628928984061737 26.244125540714048 26.71159598061836 23.41534949460586 38-39 23.49804613409885 26.3842246137677 26.72687510935251 23.390854142780945 40-41 23.686574366545276 26.091847429030313 26.877555206560977 23.34402299786343 42-43 23.508701455308074 26.07982403816347 26.71980790933903 23.691666597189432 44-45 23.39938547148091 26.140445858375845 26.832249057035142 23.6279196131081 46-47 23.4390256623611 26.085756097797645 26.71667149824668 23.758546741594564 48-49 23.22441836106406 26.166544441874308 26.778764839398445 23.83027235766319 50-51 23.21670682799109 26.27990725098867 26.86177147216014 23.6416144488601 52-53 23.41852037057051 26.078704776675625 26.769791885664517 23.73298296708935 54-55 23.075618270429903 25.987905551552842 26.938820305442956 23.9976558725743 56-57 23.003745253634868 26.214516984450125 26.764474642121307 24.0172631197937 58-59 22.96830596255817 26.01132825271198 26.884918454557017 24.135447330172838 60-61 22.969890946666137 26.089979991576996 26.928596399575394 24.011532662181473 62-63 22.885605774091623 26.056399408523955 26.904671857366658 24.153322960017764 64-65 22.709369275554756 25.95456746783321 26.793492141807462 24.542571114804566 66-67 22.705912108220595 26.09449256357948 26.63922556783393 24.560369760366 68-69 22.876082827782348 25.86965667033747 26.66869751790636 24.585562983973823 70-71 22.66535158459456 25.61995047824589 26.76253162192765 24.952166315231906 72-73 22.71022601138609 25.68524599709586 26.609622982777715 24.994905008740336 74-75 22.633035042600067 25.724272443218492 26.484539868756933 25.158152645424508 76-77 22.528119452906566 25.49148653140646 26.758707778282165 25.22168623740481 78-79 22.48555508650111 25.51841429730545 26.729919746182723 25.26611087001072 80-81 22.450172224511274 25.51361894011814 26.633404187779746 25.402804647590845 82-83 22.394767661658207 25.458733049425387 26.654038654692286 25.492460634224116 84-85 22.273003780724927 25.29265715338592 26.64311311872592 25.791225947163227 86-87 22.117251271827723 25.231512153020475 26.756656962079173 25.894579613072626 88-89 22.168718833004917 25.137203786301416 26.59582563761425 26.09825174307942 90-91 21.97535528429202 25.079660001826703 26.652085445429613 26.29289926845166 92-93 22.05606538451886 24.945985676793196 26.624448924618743 26.3735000140692 94-95 21.806419793205407 24.84248198375848 26.725043947412853 26.626054275623257 96-97 21.77064122981819 24.628072942584144 26.809608481320772 26.79167734627689 98-99 21.668345580868444 24.59346075296801 26.727111619854615 27.011082046308932 100-101 21.774409786878326 24.414144652329213 26.743924315696855 27.06752124509561 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 28.0 2 47.5 3 85.5 4 74.0 5 78.5 6 127.0 7 244.0 8 386.0 9 407.0 10 349.5 11 335.5 12 351.5 13 378.0 14 447.0 15 494.5 16 529.0 17 608.5 18 695.0 19 785.0 20 948.0 21 1146.0 22 1427.0 23 1805.0 24 2258.0 25 2899.5 26 3871.0 27 5507.0 28 7788.5 29 11115.0 30 16028.0 31 22515.5 32 30688.5 33 37840.5 34 44266.0 35 52851.0 36 63446.5 37 73100.0 38 81713.0 39 89502.5 40 96011.0 41 103151.5 42 110355.5 43 118577.5 44 126619.5 45 134179.0 46 140856.5 47 143937.5 48 146145.0 49 147370.5 50 146310.0 51 144432.0 52 141226.0 53 138276.5 54 133466.5 55 124215.5 56 112355.5 57 99927.5 58 88335.0 59 75537.5 60 61906.5 61 50212.0 62 40502.5 63 30999.5 64 22418.5 65 16723.5 66 12808.5 67 9634.0 68 7170.5 69 5246.5 70 3747.0 71 2651.5 72 1925.0 73 1466.5 74 1099.0 75 766.0 76 487.0 77 283.0 78 161.5 79 85.5 80 44.0 81 23.0 82 14.0 83 6.5 84 4.5 85 2.0 86 0.5 87 2.5 88 2.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18291122894277673 2 0.0 3 0.011973804347430695 4 0.012731640065622512 5 0.006426446890266601 6 0.11015899999636239 7 0.14335220445316393 8 0.12598260979220752 9 0.14314001045207023 10-11 0.11625199917062459 12-13 0.11711593188936326 14-15 0.11857097646829155 16-17 0.06815974449417193 18-19 0.08152796656307557 20-21 0.03780084562340778 22-23 0.08639327187386703 24-25 0.05976292473660661 26-27 0.06872054292563388 28-29 0.04110500935472411 30-31 0.024720601127417044 32-33 0.032238331451879855 34-35 0.01990076595971709 36-37 0.024205272839046606 38-39 0.03173815987787326 40-41 0.02493279512851075 42-43 0.012898363923624711 44-45 0.027054735139447835 46-47 0.03395104017499336 48-49 0.009124342047029466 50-51 0.015277968078747012 52-53 0.006805364749362509 54-55 0.012504289350164966 56-57 0.004834991882063787 58-59 0.0037740218765952445 60-61 0.022947265546848193 62-63 0.010321722481772535 64-65 0.007290379609005271 66-67 0.041862845072915926 68-69 0.09219829347521635 70-71 0.021871138827015812 72-73 0.04583390423624104 74-75 0.0885909954566233 76-77 0.23432280406490955 78-79 0.07998198169796426 80-81 0.01688457980131366 82-83 0.011549416345243277 84-85 0.012928677352352383 86-87 0.2524502344440578 88-89 0.614134909308284 90-91 0.26650050865933406 92-93 0.3499836913753445 94-95 0.0011822237203792333 96-97 0.004137783021327316 98-99 0.0033041637313163184 100-101 0.005016872454429823 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3298868.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.38277843129035 #Duplication Level Percentage of deduplicated Percentage of total 1 72.94062498167922 40.39654472000183 2 13.641811798737097 15.110428805016381 3 5.4309903980981655 9.023500136410084 4 2.749087527090432 6.090084216042933 5 1.556892378268208 4.311251281349643 6 0.9486710489688571 3.152402310553321 7 0.6016520445085011 2.3324813311623007 8 0.44425173152760344 1.968311617192828 9 0.31341235109674126 1.562188211857854 >10 1.304630146857753 11.944212612311683 >50 0.04877923400474175 1.8410619878854835 >100 0.017931687252016906 1.661373212137716 >500 0.0010447289704391056 0.42935160091349844 >1k 2.1994294031261005E-4 0.17680795716442999 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 3.0313428727672646E-5 0.0 8 0.0 0.0 0.0 3.0313428727672646E-5 0.0 9 0.0 0.0 0.0 3.0313428727672646E-5 0.0 10-11 0.0 0.0 0.0 6.062685745534529E-5 0.0 12-13 0.0 0.0 0.0 1.2125371491069058E-4 1.6672385800219953E-4 14-15 0.0 0.0 0.0 1.2125371491069058E-4 2.2735071545754485E-4 16-17 0.0 0.0 0.0 1.2125371491069058E-4 3.1829100164056275E-4 18-19 0.0 0.0 0.0 2.2735071545754485E-4 3.6376114473207175E-4 20-21 0.0 0.0 0.0 3.1829100164056275E-4 3.940745734597444E-4 22-23 0.0 0.0 0.0 4.092312878235807E-4 3.940745734597444E-4 24-25 0.0 1.5156714363836323E-5 0.0 8.336192900109977E-4 3.940745734597444E-4 26-27 0.0 3.0313428727672646E-5 0.0 0.0017278654374773407 3.940745734597444E-4 28-29 0.0 3.0313428727672646E-5 0.0 0.00762382732500967 3.940745734597444E-4 30-31 0.0 4.547014309150897E-5 0.0 0.03305679402752702 3.940745734597444E-4 32-33 0.0 6.062685745534529E-5 0.0 0.0865448390175054 4.5470143091508964E-4 34-35 0.0 7.578357181918161E-5 0.0 0.15967598582301568 4.5470143091508964E-4 36-37 0.0 1.5156714363836321E-4 0.0 0.2798687307282377 4.5470143091508964E-4 38-39 0.0 2.121940010937085E-4 0.0 0.4743142193018939 5.456417170981076E-4 40-41 0.0 2.121940010937085E-4 0.0 0.6969511965922857 5.456417170981076E-4 42-43 0.0 3.940745734597444E-4 0.0 0.9327138885217596 5.456417170981076E-4 44-45 0.0 4.5470143091508964E-4 0.0 1.215947409838769 5.456417170981076E-4 46-47 0.0 4.5470143091508964E-4 0.0 1.5477582006918738 5.456417170981076E-4 48-49 0.0 4.5470143091508964E-4 0.0 1.90201608551782 5.456417170981076E-4 50-51 0.0 4.5470143091508964E-4 0.0 2.2769174153073113 5.456417170981076E-4 52-53 0.0 4.5470143091508964E-4 0.0 2.662443601865852 6.972088607364708E-4 54-55 0.0 4.5470143091508964E-4 0.0 3.0946069985219173 7.275222894641435E-4 56-57 0.0 4.5470143091508964E-4 0.0 3.5971733333980023 7.275222894641435E-4 58-59 0.0 4.5470143091508964E-4 0.0 4.137070655752216 7.275222894641435E-4 60-61 0.0 4.8501485964276233E-4 0.0 4.708312063410842 7.275222894641435E-4 62-63 0.0 4.8501485964276233E-4 0.0 5.29101194712853 7.578357181918161E-4 64-65 0.0 4.8501485964276233E-4 0.0 5.907647714306847 7.578357181918161E-4 66-67 0.0 6.062685745534529E-4 0.0 6.613071514228517 7.729924325556524E-4 68-69 1.5156714363836323E-5 6.062685745534529E-4 0.0 7.372347120284898 7.881491469194888E-4 70-71 3.0313428727672646E-5 6.062685745534529E-4 0.0 8.17209115369272 8.184625756471614E-4 72-73 3.0313428727672646E-5 6.365820032811255E-4 0.0 8.99375179607065 9.245595761940156E-4 74-75 3.0313428727672646E-5 6.365820032811255E-4 0.0 9.836540898271771 0.0010003431480131973 76-77 3.0313428727672646E-5 6.972088607364709E-4 0.0 10.74104814136243 0.0010003431480131973 78-79 3.0313428727672646E-5 6.972088607364709E-4 0.0 11.718368240256961 0.0010003431480131973 80-81 3.0313428727672646E-5 6.972088607364709E-4 0.0 12.728063081032644 0.0010154998623770335 82-83 3.0313428727672646E-5 6.972088607364709E-4 0.0 13.750989733447959 0.0010609700054685426 84-85 3.0313428727672646E-5 7.123655751003072E-4 0.0 14.775735191586932 0.0010609700054685426 86-87 3.0313428727672646E-5 7.426790038279798E-4 0.0 15.850224986268017 0.0010912834341962152 88-89 3.0313428727672646E-5 7.578357181918161E-4 0.0 16.981143228525664 0.0011215968629238878 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4770 0.0 43.36288 1 GGTATCA 2620 0.0 43.19395 1 TCAACGC 5510 0.0 36.26925 4 CAACGCA 5595 0.0 35.543705 5 ATCAACG 5660 0.0 35.308052 3 TATCAAC 5990 0.0 33.836807 2 AACGCAG 6015 0.0 33.141262 6 ACGCAGA 7460 0.0 26.403288 7 CGCAGAG 7770 0.0 25.16204 8 GTACATG 8750 0.0 24.182388 1 TACATGG 8880 0.0 22.503883 2 ACATGGG 9225 0.0 20.839956 3 GCAGAGT 8955 0.0 20.401627 9 GAGTACA 6660 0.0 19.562464 1 AGTACAT 6655 0.0 17.688538 2 AGAGTAC 7690 0.0 17.586056 10-11 CATGGGG 6660 0.0 17.390965 4 CAGAGTA 8335 0.0 16.623676 10-11 TAAGGTG 1330 0.0 16.415531 5 GTGTAGC 1980 0.0 15.849881 1 >>END_MODULE