##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920862_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3416320 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.36200180310978 31.0 30.0 34.0 27.0 34.0 2 30.386305147058824 31.0 30.0 34.0 26.0 34.0 3 30.522169176189585 31.0 30.0 34.0 27.0 34.0 4 34.17775969464219 35.0 35.0 37.0 30.0 37.0 5 33.73818699653428 35.0 35.0 37.0 28.0 37.0 6 33.6853222180592 35.0 35.0 37.0 29.0 37.0 7 33.50359509647808 35.0 35.0 37.0 28.0 37.0 8 33.43657297911203 35.0 35.0 37.0 28.0 37.0 9 34.783989204758335 38.0 35.0 39.0 27.0 39.0 10-11 34.60210972625515 38.0 34.0 39.0 27.0 39.0 12-13 34.43658307769764 37.0 34.0 39.0 27.0 39.0 14-15 35.35728883711128 38.0 34.0 40.0 27.0 41.0 16-17 35.238183044913825 38.0 34.0 40.0 27.0 41.0 18-19 35.15577375655676 38.5 34.0 40.0 26.0 41.0 20-21 35.05084359778944 38.5 34.0 40.0 25.5 41.0 22-23 34.916382540277255 38.0 34.0 40.0 25.0 41.0 24-25 34.75322422958037 38.0 34.0 40.0 25.0 41.0 26-27 34.58512273440427 38.0 33.0 40.0 24.0 41.0 28-29 34.53410936329149 38.0 33.5 40.0 24.0 41.0 30-31 34.517744532128134 38.0 33.0 40.0 24.0 41.0 32-33 34.3793135596197 38.0 33.0 40.0 24.0 41.0 34-35 34.22745571257961 38.0 33.0 40.0 23.5 41.0 36-37 34.04636407011053 38.0 33.0 40.0 22.5 41.0 38-39 33.870814063085426 38.0 33.0 40.0 21.5 41.0 40-41 33.64834544187898 38.0 32.5 40.0 19.5 41.0 42-43 33.660259284844514 38.0 33.0 40.0 19.5 41.0 44-45 33.52709421248595 38.0 32.5 40.0 18.5 41.0 46-47 33.29801218855377 38.0 32.0 40.0 17.5 41.0 48-49 33.057522860856125 37.5 32.0 40.0 15.0 41.0 50-51 32.817204623688646 37.0 31.0 40.0 14.5 41.0 52-53 32.57004013090109 37.0 31.0 40.0 12.5 41.0 54-55 32.30609193518171 37.0 31.0 40.0 9.0 41.0 56-57 31.999681821375045 36.0 30.5 39.5 8.0 41.0 58-59 31.690261597274258 36.0 30.0 39.0 7.5 41.0 60-61 31.377819554374298 35.5 30.0 39.0 6.5 40.0 62-63 31.070232443096664 35.0 29.5 39.0 2.0 40.0 64-65 30.67668134132634 35.0 29.0 38.5 2.0 40.0 66-67 30.260172349194455 35.0 28.5 38.0 2.0 40.0 68-69 29.828995088282127 34.0 28.0 37.5 2.0 40.0 70-71 29.404401373407644 34.0 28.0 37.0 2.0 39.0 72-73 28.964374970728738 34.0 27.5 36.0 2.0 39.0 74-75 28.52007920803672 34.0 26.0 36.0 2.0 39.0 76-77 27.035262943752343 31.5 25.5 34.5 2.0 36.5 78-79 27.87533676587673 33.0 26.0 35.0 2.0 37.0 80-81 27.89665444103597 33.0 26.0 35.0 2.0 37.0 82-83 27.545908901976397 33.0 26.0 35.0 2.0 36.0 84-85 27.215602900196703 33.0 26.0 35.0 2.0 36.0 86-87 26.666554801657924 33.0 25.0 35.0 2.0 35.5 88-89 26.29475707779131 32.5 24.5 35.0 2.0 35.0 90-91 25.929933524962532 32.0 23.5 35.0 2.0 35.0 92-93 25.619156431481827 32.0 22.5 35.0 2.0 35.0 94-95 25.240880684479208 32.0 20.0 34.0 2.0 35.0 96-97 24.709815093433868 32.0 17.0 34.0 2.0 35.0 98-99 24.1104362296272 32.0 2.0 34.0 2.0 35.0 100-101 21.948409692300487 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 68320.0 3 31922.0 4 17548.0 5 12199.0 6 10491.0 7 10566.0 8 12010.0 9 14327.0 10 16453.0 11 18181.0 12 20374.0 13 22561.0 14 24585.0 15 26290.0 16 27565.0 17 28734.0 18 27932.0 19 26895.0 20 27313.0 21 28537.0 22 31150.0 23 34941.0 24 41120.0 25 48921.0 26 57800.0 27 68916.0 28 82352.0 29 96800.0 30 114951.0 31 134741.0 32 162779.0 33 198675.0 34 246795.0 35 319949.0 36 428458.0 37 520096.0 38 327484.0 39 27589.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.9469134509952 19.71459330234746 13.508034303232813 24.830458943424535 2 15.923801049082053 20.851179046459347 38.28924105470213 24.935778849756463 3 18.86132216820644 24.543469694725275 29.8346191926283 26.760588944439988 4 13.475403616298989 16.607111281817684 36.73040058924993 33.18708451263339 5 14.02826143466358 37.28059801458035 34.7890755082398 13.90206504251627 6 33.242045874438816 36.099814133420146 17.05374952053572 13.604390471605313 7 28.71269918366976 31.883721087021584 21.39547944928414 18.008100280024518 8 26.33974285705912 35.08793678984558 20.166729677530913 18.405590675564387 9 26.407486269856534 15.67209110905791 19.809249496991328 38.111173124094236 10-11 25.311659731940615 25.636151283453025 28.235556309013365 20.81663267559299 12-13 25.890718661581268 22.9005959175181 28.018541284175146 23.190144136725486 14-15 23.008440707346075 24.65927631612687 25.289270608887033 27.043012367640024 16-17 23.240527500144623 27.57211240975651 26.14448770550325 23.042872384595615 18-19 23.16649358220389 26.858216727136373 27.460272355359734 22.5150173353 20-21 23.909141607456572 26.16456934400401 27.184897578453594 22.74139147008583 22-23 23.569255963737486 26.079053624017394 27.000000732398448 23.351689679846665 24-25 23.337280456526827 26.23356874511064 27.056504391382013 23.37264640698052 26-27 23.231874256199305 26.40369086244414 26.97853548260674 23.385899398749814 28-29 23.31252179764581 26.577563893640082 26.895271444564212 23.214642864149898 30-31 23.536213026898896 26.339235522284582 26.78365641366775 23.340895037148773 32-33 23.247882593233463 26.403770668424297 26.71479166614815 23.63355507219409 34-35 23.709360068145724 26.40173977122465 26.660682397039604 23.228217763590024 36-37 23.724737132965153 26.101325955123205 26.701449657257253 23.472487254654382 38-39 23.478711417665448 26.259104980024382 26.779548507772983 23.482635094537187 40-41 23.71586624194404 26.0587066455213 26.850838063005988 23.374589049528673 42-43 23.561587971807242 26.048764264969552 26.727411093284044 23.662236669939166 44-45 23.438352301923384 26.10167000304212 26.84725256288972 23.612725132144767 46-47 23.51840369764951 26.090492563633877 26.679560223328895 23.711543515387717 48-49 23.30818692650311 26.15277539926141 26.683352873760064 23.85568480047541 50-51 23.246871168050905 26.23845008367802 26.76265083891004 23.752027909361033 52-53 23.456196707077943 26.055737204392926 26.744420402949636 23.743645685579498 54-55 23.141617512673527 25.96313015048389 26.914378298655357 23.980874038187224 56-57 23.02559552524718 26.097494719192166 26.778233001887507 24.09867675367315 58-59 23.007157976329765 25.911432300730436 26.81548064231809 24.26592908062171 60-61 22.948596443920557 25.89492675017413 26.94480139528497 24.21167541062034 62-63 22.90314643485969 25.858082337671956 26.918432978512097 24.320338248956254 64-65 22.75491031379961 25.821493511730438 26.78295498938174 24.640641185088214 66-67 22.725908381848793 25.92325787265245 26.641348142590786 24.709485602907968 68-69 22.910367017176455 25.778129091628756 26.610085669861792 24.701418221333 70-71 22.67739088465869 25.6744442328319 26.638265367889385 25.009899514620027 72-73 22.710610320884204 25.697136514047276 26.479598059762445 25.112655105306075 74-75 22.61674661466714 25.88060841436653 26.33826536837774 25.16437960258859 76-77 22.582260809556484 25.74687896057728 26.537340317079444 25.133519912786795 78-79 22.520501885152534 25.813253528225438 26.463290973487464 25.202953613134564 80-81 22.547930210352337 25.827134911321075 26.29830915664523 25.32662572168135 82-83 22.454010952240715 25.860382643397596 26.351479922550926 25.334126481810763 84-85 22.361801211551676 25.853227620802038 26.236292830444974 25.548678337201313 86-87 22.311359183524935 25.85906437348053 26.232968092062396 25.596608350932136 88-89 22.2528608668758 25.813723324349404 26.111047290829028 25.82236851794577 90-91 22.11308351950474 25.786296894025458 26.150118116054433 25.950501470415364 92-93 22.184383404585887 25.662199300247885 26.14128318634113 26.012134108825098 94-95 21.929550588405412 25.638174650868915 26.22065254267304 26.21162221805263 96-97 22.026997695233025 25.41382107883351 26.21126137802145 26.347919847912017 98-99 21.89996430234204 25.526372138790272 26.047669180041332 26.525994378826358 100-101 21.979569580386467 25.440984926956116 26.08816434613246 26.491281146524955 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 19.5 2 41.0 3 71.0 4 69.0 5 68.5 6 116.5 7 244.5 8 366.0 9 403.5 10 383.5 11 371.5 12 391.5 13 425.5 14 470.5 15 543.5 16 650.5 17 721.0 18 804.5 19 940.5 20 1085.5 21 1300.0 22 1635.0 23 2000.5 24 2502.5 25 3312.5 26 4623.5 27 6594.5 28 9246.5 29 13162.5 30 18686.0 31 25983.5 32 34953.0 33 42112.5 34 48667.0 35 56807.5 36 66143.0 37 76329.5 38 85095.0 39 92746.5 40 100777.0 41 107914.5 42 114064.0 43 121529.5 44 128808.5 45 135585.5 46 141685.5 47 145545.0 48 147760.5 49 148877.5 50 148279.0 51 146137.0 52 143460.5 53 141116.5 54 136578.0 55 127311.5 56 115735.5 57 103557.0 58 92546.0 59 80393.0 60 66381.5 61 53897.5 62 43258.5 63 32996.0 64 23934.0 65 17688.0 66 13218.5 67 10152.5 68 7537.5 69 5402.5 70 4005.5 71 2960.5 72 2171.0 73 1637.0 74 1215.0 75 853.5 76 565.5 77 319.5 78 166.5 79 88.0 80 50.5 81 25.0 82 12.0 83 10.0 84 6.5 85 3.0 86 1.5 87 0.5 88 0.5 89 0.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1867213844136381 2 0.0 3 0.013054983139752717 4 0.013230610715623828 5 0.00632259273136006 6 0.10704500749344323 7 0.14146801236418133 8 0.1232320157362308 9 0.14190708130385912 10-11 0.11428964499812665 12-13 0.1151824185088048 14-15 0.11671915979767702 16-17 0.06710436961408767 18-19 0.08093504121393781 20-21 0.037803835706257026 22-23 0.08422805826152116 24-25 0.05909867928062945 26-27 0.06635795241663543 28-29 0.04059924128887224 30-31 0.02529037092544024 32-33 0.03268136474334957 34-35 0.020445976957662045 36-37 0.02510010771824653 38-39 0.033837579617834394 40-41 0.02676856968902211 42-43 0.014006299175721245 44-45 0.02742717309853878 46-47 0.034466911764705885 48-49 0.009513160359685274 50-51 0.016055287560884226 52-53 0.006893382352941176 54-55 0.012864719932559013 56-57 0.005151742225552642 58-59 0.0038345354065192957 60-61 0.023914621581116523 62-63 0.010962087860621956 64-65 0.007917876545522668 66-67 0.041828634319970026 68-69 0.09077018546272012 70-71 0.02190954008992132 72-73 0.04635104439865118 74-75 0.08651121674784563 76-77 0.23769728831022854 78-79 0.07816890689396777 80-81 0.0175188506931435 82-83 0.011649962532783815 84-85 0.013245246346946422 86-87 0.26028006744098914 88-89 0.6255268827276134 90-91 0.2719153943424504 92-93 0.3546067113150993 94-95 0.0015513769201948298 96-97 0.004083341139003372 98-99 0.0037906285125515176 100-101 0.005517633008617459 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3416320.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.4569035012059 #Duplication Level Percentage of deduplicated Percentage of total 1 74.25995264882309 42.66746933347548 2 13.602703752638682 15.631384737417042 3 5.133206783370169 8.84814500411506 4 2.4423356968808596 5.613161858129361 5 1.4000983196962613 4.022265702349431 6 0.8008527570433237 2.7608711748067765 7 0.5440610347669039 2.1882043661357766 8 0.3505113159235033 1.611143588407794 9 0.25871395262771957 1.3378412349491795 >10 1.1402662143712823 11.060632078733315 >50 0.04990456876044501 1.938255272569108 >100 0.01580877716219939 1.5245358546670187 >500 0.0010220502846762193 0.39289188138636477 >1k 5.621276509560499E-4 0.4031979128583263 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 5.854252529037092E-5 0.0 5.854252529037092E-5 0.0 5 0.0 5.854252529037092E-5 0.0 5.854252529037092E-5 0.0 6 0.0 5.854252529037092E-5 0.0 5.854252529037092E-5 0.0 7 0.0 5.854252529037092E-5 0.0 5.854252529037092E-5 0.0 8 0.0 5.854252529037092E-5 0.0 5.854252529037092E-5 0.0 9 0.0 5.854252529037092E-5 0.0 8.781378793555638E-5 0.0 10-11 0.0 5.854252529037092E-5 0.0 8.781378793555638E-5 0.0 12-13 0.0 5.854252529037092E-5 0.0 1.3172068190333457E-4 7.317815661296366E-5 14-15 0.0 5.854252529037092E-5 0.0 1.463563132259273E-4 1.1708505058074185E-4 16-17 0.0 5.854252529037092E-5 0.0 1.6099194454852005E-4 1.6099194454852005E-4 18-19 0.0 5.854252529037092E-5 0.0 2.341701011614837E-4 2.341701011614837E-4 20-21 0.0 8.781378793555638E-5 0.0 2.341701011614837E-4 2.341701011614837E-4 22-23 0.0 8.781378793555638E-5 0.0 4.097976770325965E-4 2.341701011614837E-4 24-25 0.0 1.0244941925814912E-4 0.0 7.610528287748221E-4 2.341701011614837E-4 26-27 0.0 1.1708505058074185E-4 0.0 0.0016099194454852004 2.341701011614837E-4 28-29 0.0 1.1708505058074185E-4 0.0 0.007390993817909329 2.341701011614837E-4 30-31 0.0 1.902632071937055E-4 0.0 0.033603409516672914 2.341701011614837E-4 32-33 0.0 3.0734825777444733E-4 0.0 0.08974569127013862 2.341701011614837E-4 34-35 0.0 3.219838890970401E-4 0.0 0.16339218808542524 2.927126264518546E-4 36-37 0.0 3.366195204196328E-4 0.0 0.28715108654926935 2.927126264518546E-4 38-39 0.0 4.097976770325965E-4 0.0 0.4932793180966654 2.927126264518546E-4 40-41 0.0 4.097976770325965E-4 0.0 0.732162092544024 3.0734825777444733E-4 42-43 0.0 4.2443330835518925E-4 0.0 0.9871147901835893 3.219838890970401E-4 44-45 0.0 4.3906893967778196E-4 0.0 1.2976243443237168 3.219838890970401E-4 46-47 0.0 4.3906893967778196E-4 0.0 1.6557728784188837 3.219838890970401E-4 48-49 0.0 4.829758336455601E-4 0.0 2.03559678250281 3.219838890970401E-4 50-51 0.0 4.976114649681529E-4 0.0 2.4408427781940802 3.512551517422255E-4 52-53 0.0 4.976114649681529E-4 0.0 2.8611195672536534 3.80526414387411E-4 54-55 0.0 4.976114649681529E-4 0.0 3.3330162279880104 4.097976770325965E-4 56-57 1.463563132259273E-5 4.976114649681529E-4 0.0 3.863045616335706 4.2443330835518925E-4 58-59 2.927126264518546E-5 4.976114649681529E-4 0.0 4.425771005058074 4.537045710003747E-4 60-61 2.927126264518546E-5 4.976114649681529E-4 0.0 5.027456444361184 4.683402023229674E-4 62-63 2.927126264518546E-5 4.976114649681529E-4 0.0 5.638406238291495 4.976114649681529E-4 64-65 2.927126264518546E-5 5.268827276133383E-4 0.0 6.29736090295991 5.268827276133383E-4 66-67 2.927126264518546E-5 5.561539902585238E-4 0.0 7.039504496065943 5.268827276133383E-4 68-69 2.927126264518546E-5 5.561539902585238E-4 0.0 7.8403516064068945 5.415183589359311E-4 70-71 2.927126264518546E-5 5.561539902585238E-4 0.0 8.678314677781941 5.561539902585238E-4 72-73 2.927126264518546E-5 5.561539902585238E-4 0.0 9.530840202322967 5.707896215811166E-4 74-75 2.927126264518546E-5 5.561539902585238E-4 0.0 10.415959277819407 5.854252529037092E-4 76-77 2.927126264518546E-5 5.561539902585238E-4 0.0 11.367392398838517 6.000608842263019E-4 78-79 2.927126264518546E-5 5.561539902585238E-4 0.0 12.387920335331586 6.146965155488947E-4 80-81 2.927126264518546E-5 5.561539902585238E-4 0.0 13.451418485387785 6.146965155488947E-4 82-83 2.927126264518546E-5 5.561539902585238E-4 0.0 14.523610200449607 6.439677781940802E-4 84-85 2.927126264518546E-5 5.561539902585238E-4 0.0 15.597119122330461 6.439677781940802E-4 86-87 2.927126264518546E-5 5.561539902585238E-4 0.0 16.7227016204571 6.58603409516673E-4 88-89 2.927126264518546E-5 5.561539902585238E-4 0.0 17.905202088797303 6.732390408392656E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2595 0.0 44.336876 1 GTATCAA 4805 0.0 43.832615 1 TCAACGC 5800 0.0 35.43508 4 CAACGCA 5970 0.0 34.344017 5 ATCAACG 6030 0.0 34.00478 3 AACGCAG 6465 0.0 31.861258 6 TATCAAC 6535 0.0 31.447807 2 ACGCAGA 8110 0.0 25.398647 7 CGCAGAG 8195 0.0 24.786623 8 GTACATG 9210 0.0 23.02302 1 TACATGG 9225 0.0 22.689259 2 ACATGGG 9645 0.0 20.718266 3 GCAGAGT 9630 0.0 20.00886 9 TAAGGCG 1120 0.0 19.069365 5 GGACCGT 410 1.8189894E-12 18.521572 6 GTAAGGT 1360 0.0 18.148386 4 CATGGGG 6715 0.0 18.024687 4 TAAGGTG 1705 0.0 17.81547 5 GAGTACA 7040 0.0 17.761112 1 GTATAGG 830 0.0 17.757044 1 >>END_MODULE