##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920860_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2859974 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.62138362096998 31.0 30.0 33.0 22.0 34.0 2 28.6349791991116 31.0 28.0 34.0 18.0 34.0 3 28.71086800089791 31.0 28.0 34.0 22.0 34.0 4 32.191847198610894 35.0 32.0 37.0 22.0 37.0 5 32.15557239331547 35.0 32.0 37.0 22.0 37.0 6 32.28440957854862 35.0 32.0 37.0 23.0 37.0 7 32.11505279418624 35.0 32.0 37.0 22.0 37.0 8 32.05795507231884 35.0 32.0 37.0 22.0 37.0 9 33.324707846994414 37.0 33.0 39.0 22.0 39.0 10-11 33.1282130536851 37.0 32.0 39.0 19.0 39.0 12-13 32.95121424180779 37.0 32.0 39.0 18.0 39.0 14-15 33.710760482437955 38.0 32.0 40.0 17.0 41.0 16-17 33.59930876993987 38.0 32.0 40.0 17.0 41.0 18-19 33.46919622346218 38.0 32.0 40.0 17.5 41.0 20-21 33.369105278579454 38.0 32.0 40.0 17.0 41.0 22-23 33.14910065615981 38.0 32.0 40.0 16.0 41.0 24-25 32.95231844765023 38.0 32.0 40.0 12.5 41.0 26-27 32.98526927167869 38.0 32.0 40.0 10.5 41.0 28-29 32.82029696773468 38.0 31.5 40.0 10.0 41.0 30-31 32.56987336248511 38.0 31.0 40.0 9.0 41.0 32-33 32.32920561515594 37.0 30.5 40.0 8.5 41.0 34-35 32.00737996219546 37.0 30.0 40.0 7.0 41.0 36-37 31.705243998721667 37.0 30.0 40.0 2.0 41.0 38-39 31.499679018061002 37.0 30.0 40.0 2.0 41.0 40-41 31.28993742600457 37.0 30.0 40.0 2.0 41.0 42-43 31.05107371605476 36.0 29.5 40.0 2.0 41.0 44-45 30.769072900662735 36.0 29.0 39.0 2.0 41.0 46-47 30.50531246088251 36.0 28.0 39.0 2.0 40.0 48-49 30.19369179579954 35.5 28.0 39.0 2.0 40.0 50-51 29.033053622165795 34.0 25.5 38.0 2.0 39.5 52-53 29.47838564266668 34.5 27.5 38.5 2.0 39.5 54-55 30.120080637096702 35.0 28.0 39.0 2.0 40.0 56-57 30.058036017110645 35.0 28.0 39.0 2.0 40.0 58-59 29.797341339466723 35.0 28.0 39.0 2.0 40.0 60-61 29.453806747893513 35.0 27.0 39.0 2.0 40.0 62-63 29.051005358789975 34.5 26.0 38.0 2.0 40.0 64-65 28.614455411133108 34.0 26.0 38.0 2.0 40.0 66-67 28.223498010821075 34.0 26.0 37.0 2.0 40.0 68-69 27.768845625869325 34.0 25.0 37.0 2.0 39.0 70-71 27.440248407852657 33.5 25.0 36.0 2.0 39.0 72-73 26.981222032088404 33.0 23.5 36.0 2.0 39.0 74-75 26.53973217938345 33.0 22.5 35.0 2.0 38.0 76-77 26.13192305244733 32.5 21.5 35.0 2.0 37.0 78-79 25.675878521972578 32.0 20.0 35.0 2.0 36.5 80-81 25.225786143510398 32.0 18.0 35.0 2.0 36.0 82-83 24.753570487004424 32.0 15.0 35.0 2.0 36.0 84-85 24.35432839599241 31.0 8.5 34.0 2.0 35.0 86-87 23.89390462990223 31.0 4.5 34.0 2.0 35.0 88-89 23.35089007802169 31.0 2.0 34.0 2.0 35.0 90-91 22.84173527451648 30.5 2.0 34.0 2.0 35.0 92-93 22.296288532692955 30.0 2.0 34.0 2.0 35.0 94-95 21.64746008180494 30.0 2.0 34.0 2.0 35.0 96-97 20.987085022451254 29.0 2.0 34.0 2.0 35.0 98 20.581191297543263 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 144632.0 3 25178.0 4 19126.0 5 15658.0 6 14431.0 7 14749.0 8 16588.0 9 19205.0 10 21091.0 11 22505.0 12 22994.0 13 22877.0 14 21499.0 15 22349.0 16 23923.0 17 25464.0 18 26373.0 19 26414.0 20 27148.0 21 29340.0 22 31824.0 23 35637.0 24 40746.0 25 46687.0 26 53920.0 27 62414.0 28 72582.0 29 84214.0 30 97268.0 31 114771.0 32 136027.0 33 165435.0 34 204855.0 35 260337.0 36 328202.0 37 349447.0 38 195383.0 39 18678.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.32835822467397 17.082610605069682 12.339406883637853 25.249624286618495 2 16.604114620111297 18.992074409130606 38.534194127837004 25.86961684292109 3 20.25637537372338 22.706329052833095 27.934452005857167 29.102843567586355 4 13.775791402632647 14.662421139507883 34.9290780141844 36.63270944367507 5 15.09978096137079 36.28857701133104 33.31076380934861 15.300878217949556 6 35.175489768168006 33.26772314458863 16.764347507372403 14.792439579870962 7 30.772273266624538 30.50918467014957 19.815855468084727 18.902686595141166 8 27.662484351286516 33.62256352153752 19.352895099417413 19.362057027758546 9 27.3852489568087 15.439930572795419 18.644435229131453 38.53038524126443 10-11 26.53571790088265 24.566398954395908 26.68942561880381 22.208457525917634 12-13 27.06121530547858 21.750563282495854 26.770897749999605 24.417323662025954 14-15 24.136189326948866 23.436608893381734 24.12590909265743 28.301292687011976 16-17 24.519910286742537 26.41481261832212 24.730713363065245 24.334563731870094 18-19 24.418792355721866 25.72406870972769 26.178020085721887 23.67911884882856 20-21 25.274504736677546 24.861315071685738 25.914716883281404 23.94946330835532 22-23 24.849152719451094 24.673660793427207 25.77953293037391 24.697653556747785 24-25 24.593309504644704 24.83392899223401 25.852441857434087 24.72031964568719 26-27 24.43419438606056 25.122722802445203 25.8062647985145 24.636818012979738 28-29 24.493149985200695 25.304802742385 25.687013206019643 24.51503406639466 30-31 24.70547076573228 25.136764770192855 25.539493593387853 24.618270870687017 32-33 24.451815972161505 25.18346827076084 25.480965953800688 24.88374980327697 34-35 24.790890868499197 25.13316753731507 25.553008671394924 24.52293292279081 36-37 24.906032680800084 24.899370949790587 25.479363398656968 24.715232970752364 38-39 24.750116348547746 25.014981687292 25.513211731166248 24.721690232994007 40-41 24.798553906870858 25.0401960968628 25.567546397918427 24.593703598347915 42-43 24.80928343324064 24.83070782139436 25.48854190355689 24.87146684180811 44-45 24.5214062322791 24.96826697106966 25.636003636262767 24.874323160388474 46-47 24.713529551180205 24.863545790503945 25.571316965265407 24.851607693050447 48-49 24.601484383777102 24.92402539040557 25.488656471183013 24.98583375463431 50-51 24.38098625123841 25.16691815270457 25.61831160067996 24.833783995377058 52-53 24.61935473898849 24.93036982287755 25.701680907692616 24.748594530441345 54-55 24.285904739053706 24.902203213913904 25.861192236399216 24.95069981063317 56-57 24.296272493573266 24.913537584109456 25.77768763959712 25.012502282720163 58-59 24.283223720017276 24.657974851556766 25.865834003420073 25.19296742500588 60-61 24.247626064666843 24.653123965096242 25.991936047469228 25.107313922767688 62-63 24.169892669817443 24.72444160198421 25.96557576234239 25.14008996585595 64-65 24.108846137430156 24.70359566938172 25.877497509801394 25.310060683386727 66-67 24.08783399179488 24.814706671895006 25.785884748849973 25.31157458746014 68-69 24.203679626506585 24.564478620082998 25.796504732315377 25.435337021095037 70-71 24.01651845338697 24.49673298969615 25.92223058792145 25.564517968995432 72-73 24.053730224409392 24.59357340245797 25.83480560100458 25.51789077212806 74-75 24.071507974493972 24.752652433333004 25.85568081812427 25.32015877404875 76-77 24.043321046287833 24.570430034896145 25.94959094840669 25.436657970409332 78-79 24.099729795687924 24.650331829703035 25.800222149665576 25.44971622494347 80-81 24.07829387066389 24.62290889029579 25.896894271303456 25.401902967736863 82-83 24.101509703381126 24.605282251067212 25.944189701043953 25.349018344507712 84-85 24.149103271988665 24.63268296894071 25.836631477879912 25.381582281190717 86-87 24.131032578317683 24.587652541454048 25.936108644217487 25.34520623601078 88-89 24.00655588429756 24.492367411048786 25.841368030094724 25.659708674558935 90-91 24.09479103111252 24.48877099204091 25.951947149269305 25.46449082757726 92-93 24.26967577524188 24.39316423473826 25.872850049777885 25.464309940241975 94-95 24.20749319994027 24.328482586038895 25.979535860499503 25.484488353521336 96-97 24.391465790146484 24.12867818854133 25.929920849623763 25.549935171688425 98 24.397954925973274 24.081697682359394 25.882981310572546 25.637366081094786 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 67.0 1 59.0 2 72.0 3 105.0 4 117.5 5 134.0 6 219.5 7 414.5 8 631.5 9 744.0 10 757.0 11 827.5 12 988.0 13 1105.5 14 1232.5 15 1436.0 16 1567.0 17 1614.5 18 1634.5 19 1615.5 20 1671.0 21 1699.0 22 1744.0 23 1935.0 24 2171.0 25 2538.0 26 3170.0 27 4103.5 28 5243.5 29 7078.0 30 10117.0 31 14558.0 32 19420.5 33 23983.0 34 29767.0 35 36908.0 36 43789.0 37 50302.0 38 56771.0 39 63195.0 40 69133.0 41 74692.5 42 82314.0 43 90379.5 44 97291.0 45 105842.0 46 114684.0 47 121904.0 48 128027.5 49 131386.5 50 131986.0 51 133089.5 52 135498.0 53 137794.0 54 135998.5 55 130232.5 56 122309.0 57 111840.5 58 101342.5 59 90260.0 60 77180.0 61 63689.5 62 51969.0 63 40652.0 64 30151.5 65 22619.5 66 16870.5 67 12414.5 68 9146.0 69 6671.5 70 4859.0 71 3697.0 72 2908.5 73 2299.0 74 1785.0 75 1323.0 76 915.0 77 546.5 78 316.5 79 173.0 80 99.0 81 63.0 82 36.5 83 19.5 84 11.5 85 10.0 86 9.5 87 8.5 88 6.5 89 4.0 90 5.0 91 4.5 92 2.5 93 1.5 94 4.5 95 6.0 96 3.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.39836026481359615 2 0.026398841388068563 3 0.020035147172666603 4 0.01727288429894817 5 0.023112098221871945 6 0.02314706357470383 7 0.01681833471213375 8 0.010979120789209972 9 0.0 10-11 1.7482676415939444E-5 12-13 0.0061014540691628665 14-15 0.00409094628132983 16-17 0.006853209155048262 18-19 0.03767516767634951 20-21 0.08138185871619812 22-23 0.10008832248125334 24-25 0.06764047505326971 26-27 0.07736084314053204 28-29 0.060559991104814234 30-31 0.05590959917817434 32-33 0.02181838016709243 34-35 0.3526780313387464 36-37 0.5373475423203148 38-39 0.4894974569698885 40-41 0.4978192109438757 42-43 0.44586069663570366 44-45 0.4194094072183873 46-47 0.4178010009881209 48-49 0.40748622190271655 50-51 0.4046190629705025 52-53 0.46600073986686597 54-55 0.46792383427261924 56-57 0.43685711828149487 58-59 0.42252132362042455 60-61 0.4366123608116717 62-63 0.41586042390595157 64-65 0.46551122492721964 66-67 0.487626810593383 68-69 0.42890250051224243 70-71 0.3859825299111111 72-73 0.37161176989720884 74-75 0.3544787470095882 76-77 0.3527654447208261 78-79 0.3529227888085696 80-81 0.3681851653196847 82-83 0.36274805295432755 84-85 0.36335994662888543 86-87 0.3500381471999396 88-89 0.3928532217425753 90-91 0.3703005691660134 92-93 0.36066761446083073 94-95 0.36890195505273826 96-97 0.3679928558791094 98 0.3634648426873811 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2859974.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.910305281358426 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5097844273372 35.464756922265515 2 11.583925391721275 11.331466545311342 3 5.440717937354587 7.983215257973267 4 2.9552768648305574 5.781739745991936 5 1.8770969426861486 4.590469225474204 6 1.260234835333814 3.698308231342758 7 0.8628587854609217 2.9541880628117085 8 0.6660448050841639 2.6061163798183453 9 0.503922260418583 2.2182292435630586 >10 2.2328462805758518 18.10120057704549 >50 0.07913275920477587 2.6000492967079727 >100 0.027221999789074965 2.304693793612025 >500 7.205463099899597E-4 0.2270651079511112 >1k 2.1616389294522277E-4 0.13850161013132625 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.7482676415939444E-5 0.0 12-13 0.0 0.0 0.0 3.496535283187889E-5 0.0 14-15 0.0 0.0 0.0 3.496535283187889E-5 0.0 16-17 0.0 0.0 0.0 3.496535283187889E-5 0.0 18-19 0.0 0.0 0.0 3.496535283187889E-5 0.0 20-21 0.0 1.7482676415939444E-5 0.0 1.3986141132751555E-4 5.244802924781833E-5 22-23 0.0 3.496535283187889E-5 0.0 3.1468817548691003E-4 6.993070566375778E-5 24-25 0.0 3.496535283187889E-5 0.0 6.993070566375778E-4 6.993070566375778E-5 26-27 0.0 3.496535283187889E-5 0.0 0.0016608542595142474 6.993070566375778E-5 28-29 0.0 3.496535283187889E-5 0.0 0.008059513827748084 6.993070566375778E-5 30-31 1.7482676415939444E-5 3.496535283187889E-5 0.0 0.03160867896001852 6.993070566375778E-5 32-33 3.496535283187889E-5 3.496535283187889E-5 0.0 0.07818252893208119 6.993070566375778E-5 34-35 3.496535283187889E-5 3.496535283187889E-5 0.0 0.14164464432194138 6.993070566375778E-5 36-37 3.496535283187889E-5 3.496535283187889E-5 0.0 0.24645328943549835 6.993070566375778E-5 38-39 3.496535283187889E-5 3.496535283187889E-5 0.0 0.4148464286738271 6.993070566375778E-5 40-41 3.496535283187889E-5 3.496535283187889E-5 0.0 0.6133971847296513 6.993070566375778E-5 42-43 3.496535283187889E-5 3.496535283187889E-5 0.0 0.8222102718416322 6.993070566375778E-5 44-45 3.496535283187889E-5 3.496535283187889E-5 0.0 1.0649222685241195 6.993070566375778E-5 46-47 3.496535283187889E-5 3.496535283187889E-5 0.0 1.3590158511930528 6.993070566375778E-5 48-49 3.496535283187889E-5 3.496535283187889E-5 0.0 1.6674801938758885 6.993070566375778E-5 50-51 3.496535283187889E-5 3.496535283187889E-5 0.0 2.0081301438404684 6.993070566375778E-5 52-53 3.496535283187889E-5 3.496535283187889E-5 0.0 2.3450562837284536 6.993070566375778E-5 54-55 3.496535283187889E-5 3.496535283187889E-5 0.0 2.7281192066781026 6.993070566375778E-5 56-57 3.496535283187889E-5 6.993070566375778E-5 0.0 3.1762526512478786 6.993070566375778E-5 58-59 3.496535283187889E-5 6.993070566375778E-5 0.0 3.6577430424192667 6.993070566375778E-5 60-61 3.496535283187889E-5 6.993070566375778E-5 0.0 4.163988903395625 6.993070566375778E-5 62-63 3.496535283187889E-5 6.993070566375778E-5 0.0 4.682455155186725 6.993070566375778E-5 64-65 3.496535283187889E-5 6.993070566375778E-5 0.0 5.235222418105899 6.993070566375778E-5 66-67 3.496535283187889E-5 6.993070566375778E-5 0.0 5.863951910052329 6.993070566375778E-5 68-69 3.496535283187889E-5 6.993070566375778E-5 0.0 6.5553218315970705 6.993070566375778E-5 70-71 3.496535283187889E-5 6.993070566375778E-5 0.0 7.280555697359486 6.993070566375778E-5 72-73 3.496535283187889E-5 6.993070566375778E-5 0.0 8.01402390371381 6.993070566375778E-5 74-75 3.496535283187889E-5 6.993070566375778E-5 0.0 8.76334889757739 6.993070566375778E-5 76-77 3.496535283187889E-5 6.993070566375778E-5 0.0 9.577254898121453 6.993070566375778E-5 78-79 3.496535283187889E-5 6.993070566375778E-5 0.0 10.462909802676528 6.993070566375778E-5 80-81 3.496535283187889E-5 6.993070566375778E-5 0.0 11.385383223763572 6.993070566375778E-5 82-83 3.496535283187889E-5 6.993070566375778E-5 0.0 12.326388281851514 6.993070566375778E-5 84-85 3.496535283187889E-5 6.993070566375778E-5 0.0 13.270959805928307 6.993070566375778E-5 86 3.496535283187889E-5 6.993070566375778E-5 0.0 13.99404330249156 6.993070566375778E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5100 0.0 44.038265 1 GGTATCA 2900 0.0 37.61239 1 TCAACGC 6370 0.0 34.912785 4 ATCAACG 6545 0.0 34.259525 3 CAACGCA 6515 0.0 34.206135 5 TATCAAC 6590 0.0 33.818024 2 AACGCAG 6845 0.0 32.752857 6 GTACATG 10190 0.0 28.273577 1 ACGCAGA 8230 0.0 26.512613 7 TACATGG 10710 0.0 26.117868 2 CGCAGAG 8420 0.0 25.476583 8 ACATGGG 10940 0.0 24.771502 3 CATGGGG 7225 0.0 21.070868 4 GCAGAGT 9400 0.0 21.016697 9 GTATAGG 465 0.0 18.80534 1 GAGTACA 7595 0.0 18.663948 1 AGAGTAC 7715 0.0 18.388868 10-11 GTACGAA 230 2.7854567E-6 18.009233 1 TAAGGTA 565 0.0 17.854856 4 TACACCG 370 2.3464963E-10 17.35036 5 >>END_MODULE