##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920858_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2466955 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.23400670056811 31.0 30.0 34.0 26.0 34.0 2 30.255158687531797 31.0 30.0 34.0 26.0 34.0 3 30.387973027477194 31.0 30.0 34.0 27.0 34.0 4 34.03600957455649 35.0 35.0 37.0 30.0 37.0 5 33.571226066142266 35.0 35.0 37.0 28.0 37.0 6 33.52005366940216 35.0 35.0 37.0 28.0 37.0 7 33.33159015871794 35.0 33.0 37.0 27.0 37.0 8 33.26381916167907 35.0 33.0 37.0 27.0 37.0 9 34.58283633061811 38.0 34.0 39.0 27.0 39.0 10-11 34.386854239335534 37.5 34.0 39.0 27.0 39.0 12-13 34.20753195741308 37.0 34.0 39.0 26.0 39.0 14-15 35.07933748284829 38.0 34.0 40.0 26.0 41.0 16-17 34.959725451011465 38.0 34.0 40.0 25.0 41.0 18-19 34.8895190629744 38.5 34.0 40.0 25.0 41.0 20-21 34.791274668569145 38.0 34.0 40.0 25.0 41.0 22-23 34.6415441303145 38.0 33.5 40.0 24.5 41.0 24-25 34.448705387816155 38.0 33.0 40.0 24.0 41.0 26-27 34.26817068004888 38.0 33.0 40.0 23.0 41.0 28-29 34.20261030298485 38.0 33.0 40.0 22.5 41.0 30-31 34.18157607252666 38.0 33.0 40.0 23.0 41.0 32-33 34.03119088106593 38.0 33.0 40.0 22.0 41.0 34-35 33.845419961045096 38.0 33.0 40.0 20.5 41.0 36-37 33.64078165187448 38.0 33.0 40.0 19.0 41.0 38-39 33.44529916435444 38.0 32.0 40.0 18.0 41.0 40-41 33.210813330603926 38.0 32.0 40.0 16.0 41.0 42-43 33.21522240981291 38.0 32.0 40.0 15.5 41.0 44-45 33.0377027550158 38.0 32.0 40.0 15.0 41.0 46-47 32.76368985246995 37.5 31.5 40.0 11.0 41.0 48-49 32.47830686007649 37.0 31.0 40.0 9.0 41.0 50-51 32.21498912627105 37.0 31.0 40.0 8.0 41.0 52-53 31.955115314223406 37.0 30.5 40.0 7.0 41.0 54-55 31.67165088134968 36.0 30.0 40.0 3.5 41.0 56-57 31.348866720309047 36.0 30.0 39.0 2.0 41.0 58-59 31.011181801046227 35.5 29.0 39.0 2.0 40.5 60-61 30.683585229564383 35.0 29.0 39.0 2.0 40.0 62-63 30.36495254270953 35.0 28.5 39.0 2.0 40.0 64-65 29.95842587319185 35.0 28.0 38.0 2.0 40.0 66-67 29.531845331592997 34.0 28.0 38.0 2.0 40.0 68-69 29.096615463192478 34.0 27.0 37.0 2.0 39.5 70-71 28.679227428145225 34.0 26.0 36.5 2.0 39.0 72-73 28.243406750427148 34.0 26.0 36.0 2.0 39.0 74-75 27.79932264674467 33.0 26.0 36.0 2.0 38.5 76-77 26.355870698898034 31.5 24.0 34.5 2.0 36.0 78-79 27.18395552411779 33.0 25.5 35.0 2.0 37.0 80-81 27.20962887446265 33.0 26.0 35.0 2.0 37.0 82-83 26.87371881530064 33.0 25.0 35.0 2.0 36.0 84-85 26.546803650654347 33.0 24.5 35.0 2.0 36.0 86-87 26.00075356056353 32.0 23.0 35.0 2.0 35.0 88-89 25.636352507443387 32.0 21.5 35.0 2.0 35.0 90-91 25.266808677093827 32.0 20.0 35.0 2.0 35.0 92-93 24.94277945888758 32.0 18.5 34.0 2.0 35.0 94-95 24.563635939852976 32.0 14.0 34.0 2.0 35.0 96-97 24.037086205463822 31.0 4.5 34.0 2.0 35.0 98-99 23.452028715562303 31.0 2.0 34.0 2.0 35.0 100-101 21.297058316831887 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57068.0 3 26123.0 4 14301.0 5 10117.0 6 8829.0 7 8915.0 8 10014.0 9 11674.0 10 12953.0 11 14847.0 12 16560.0 13 17902.0 14 19892.0 15 21575.0 16 23557.0 17 24142.0 18 23234.0 19 21214.0 20 21174.0 21 21797.0 22 23813.0 23 26912.0 24 31211.0 25 36116.0 26 42590.0 27 50197.0 28 59008.0 29 69497.0 30 82681.0 31 96982.0 32 115560.0 33 141758.0 34 178172.0 35 229881.0 36 304011.0 37 357757.0 38 217474.0 39 17446.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.73862763597875 19.78838656432172 13.774246780532797 23.69873901916673 2 16.081079711628302 21.357381873605316 37.951847520526314 24.609690894240067 3 19.022758147905055 25.982688450899733 29.047905339856005 25.9466480613392 4 13.48457458431832 16.742810276934627 36.032232078750965 33.740383059996084 5 14.265149893628063 37.99152429690743 33.3306578196347 14.412667989829805 6 32.97717878525464 35.27829156193721 17.38479218727047 14.359737465537686 7 29.440906448606324 32.004785225069575 20.745907309199907 17.80840101712419 8 27.12002603967967 33.97804809548315 20.170767699757945 18.731158165079233 9 27.478502735794024 15.6330565267533 19.490731099801785 37.39770963765089 10-11 25.91411053899447 25.81070749112065 27.02885870306281 21.246323266822067 12-13 26.584519509949722 23.118020692626093 27.374742529212824 22.92271726821136 14-15 23.727010356639408 24.45844205413682 25.10929573269282 26.70525185653095 16-17 23.753641958608124 27.85364670435956 25.5510243319138 22.841687005118516 18-19 23.57230497926279 26.47748176632704 27.45177663327199 22.49843662113818 20-21 24.54184165189434 25.732555595678335 26.891457422756265 22.834145329671056 22-23 24.28977647305583 25.71146090317105 26.593142176962655 23.40562044681047 24-25 23.930067615662693 26.00799901685342 26.804493758601012 23.257439608882876 26-27 23.68331922443372 26.275834598537244 26.65963452609308 23.381211650935953 28-29 23.515793417908778 26.088985889493927 27.14524624041551 23.249974452181785 30-31 23.696106463656328 26.032621564550606 26.850046060079208 23.421225911713854 32-33 23.428997533042793 26.194714450919555 26.695789791241246 23.680498224796406 34-35 23.973285173234657 26.175559614846243 26.624942149701873 23.226213062217223 36-37 23.958604482568198 25.924684777611002 26.503900088957224 23.612810650863583 38-39 23.805408057547538 25.818172971066062 26.91730176977335 23.45911720161305 40-41 23.78534450041682 25.63398716131397 27.061593580008235 23.51907475826097 42-43 23.97286903416324 25.60921225251639 26.58445051300804 23.83346820031233 44-45 23.61389555928805 25.890661317282476 26.61086169618593 23.884581427243543 46-47 23.631540863142224 25.761650643992102 26.52168438902812 24.085124103837554 48-49 23.883240571562236 25.732381513374275 26.419267259709585 23.965110655353904 50-51 23.47034960657503 25.90683563723169 26.50530458812006 24.117510168073224 52-53 23.639594185402373 25.7472713036347 26.506313971002417 24.10682053996051 54-55 23.282207084214594 25.674531214336593 26.655603029061005 24.387658672387815 56-57 23.422585278232813 25.87939535526668 26.365949594561783 24.332069771938723 58-59 23.28741662471046 25.484361077938004 26.656256663334492 24.571965634017037 60-61 23.459093193446833 25.68900054148174 26.54132239530762 24.31058386976381 62-63 23.171066409859016 25.782635645967055 26.566416548120824 24.479881396053102 64-65 22.794015554401998 25.534045346499855 26.61392274851055 25.058016350587604 66-67 23.089509822527823 25.84891750244529 26.27777615569408 24.783796519332803 68-69 23.060641118723144 25.47322971585018 26.405478715084783 25.060650450341893 70-71 22.743563311712993 25.380352757176116 26.584483022509275 25.291600908601612 72-73 22.983458484403073 25.55072993018941 26.232776731613562 25.233034853793963 74-75 22.95102119556651 25.41755896904109 26.09381209222618 25.53760774316622 76-77 22.74745396162839 25.489031981216492 26.45382834284618 25.309685714308934 78-79 22.881312098161523 25.464782230090606 26.136364788862952 25.51754088288492 80-81 22.48657342220734 25.687403889541844 26.1752487165339 25.650773971716916 82-83 22.722887907854776 25.690794254524775 25.82230751034339 25.76401032727706 84-85 22.542071230211015 25.449151683457323 25.843350292907385 26.165426793424277 86-87 22.464184266153914 25.436212451345103 26.085465979472787 26.014137303028196 88-89 22.46599742748827 25.282830472618983 26.07108281860325 26.180089281289494 90-91 22.290300030076164 25.50288162183692 25.981438128449614 26.225380219637294 92-93 22.372674862634987 25.413000125085293 25.83180197065275 26.382523041626964 94-95 22.169502422149396 25.166498069151398 26.018390134582773 26.645609374116436 96-97 22.21464620872773 25.110485031517925 25.999087905628638 26.67578085412571 98-99 21.933336184449082 25.13741600947435 25.952537840960844 26.97670996511572 100-101 22.0700090196913 25.164249592086996 26.000749951861195 26.764991436360503 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 105.0 1 86.0 2 116.5 3 166.0 4 147.5 5 154.0 6 266.0 7 574.5 8 881.0 9 915.5 10 732.0 11 589.0 12 616.5 13 706.5 14 777.0 15 832.0 16 885.5 17 949.0 18 1078.0 19 1179.5 20 1315.5 21 1496.5 22 1699.0 23 2060.5 24 2459.0 25 2934.5 26 3698.5 27 4827.5 28 6466.5 29 8774.5 30 12093.5 31 16450.5 32 21989.0 33 27832.0 34 33457.5 35 40404.0 36 49372.5 37 57423.5 38 61940.5 39 65254.5 40 67913.0 41 71742.5 42 77204.0 43 82171.0 44 85705.0 45 88048.0 46 90065.5 47 93530.0 48 100556.5 49 106478.0 50 107923.5 51 106556.5 52 103883.5 53 101833.0 54 98435.0 55 92809.5 56 85171.5 57 76555.0 58 69795.5 59 62050.0 60 53673.0 61 45001.0 62 36871.5 63 29403.5 64 22433.5 65 17707.0 66 13710.5 67 10449.0 68 7717.5 69 5604.5 70 4627.0 71 4195.5 72 3920.0 73 3309.0 74 2297.5 75 1555.0 76 1002.0 77 549.5 78 335.0 79 193.0 80 113.5 81 78.5 82 48.0 83 28.0 84 17.0 85 12.0 86 9.0 87 4.0 88 3.5 89 2.5 90 1.0 91 1.0 92 0.5 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19554470997646894 2 0.0 3 0.011268953021032 4 0.013944315968471253 5 0.005634476510516 6 0.108190056162354 7 0.1434562041058714 8 0.12253973015316454 9 0.14195637942321607 10-11 0.11394614007957178 12-13 0.11514194624547265 14-15 0.11688498574153157 16-17 0.06453299715641347 18-19 0.07870026003717133 20-21 0.03702945534069328 22-23 0.08358482420635967 24-25 0.05683119473196714 26-27 0.06518156999215632 28-29 0.04017098001382271 30-31 0.024767375164930043 32-33 0.030766673895551398 34-35 0.018626201126489945 36-37 0.024362017142590765 38-39 0.03323935783182101 40-41 0.02671309367215859 42-43 0.013255207330494477 44-45 0.025436215901789856 46-47 0.0330164109195344 48-49 0.009809664140610592 50-51 0.016660214718144432 52-53 0.0066276036652472385 54-55 0.012809313505921268 56-57 0.0047832246636035115 58-59 0.003931972816691022 60-61 0.02328781838339167 62-63 0.01045823697635344 64-65 0.007843677732265079 66-67 0.04017098001382271 68-69 0.08984760565150154 70-71 0.021382635678397054 72-73 0.04331250468695213 74-75 0.08607777604374624 76-77 0.2461739269666451 78-79 0.07930829707068025 80-81 0.0158900344756998 82-83 0.011491899933318605 84-85 0.01236341968134806 86-87 0.26405021575180737 88-89 0.6187992890020289 90-91 0.2649014675987199 92-93 0.349925312784384 94-95 0.0013984851770705183 96-97 0.004256259234562447 98-99 0.003425275288766921 100-101 0.005269654290410648 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2466955.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.99084028111132 #Duplication Level Percentage of deduplicated Percentage of total 1 70.03227728012142 26.605850606715936 2 11.381903100603491 8.648161255802258 3 5.54195499602527 6.316305812973087 4 3.2525928112902753 4.942749359728787 5 2.087388870489289 3.965082859166396 6 1.5179230174242326 3.4600302548391944 7 1.058970064981526 2.8161813820833856 8 0.8213225567071867 2.4962187256909374 9 0.6383260147114118 2.18254875049616 >10 3.3084532235917035 22.310344870997543 >50 0.22193770189480097 5.827801662117401 >100 0.13211654655441435 8.886591339498008 >500 0.0039744706085506915 0.9832940147601981 >1k 8.593449964433398E-4 0.5588391051307532 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2881 0.11678364623594674 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.053580223392806E-5 2 4.053580223392806E-5 0.0 0.0 0.0 4.053580223392806E-5 3 4.053580223392806E-5 0.0 0.0 0.0 4.053580223392806E-5 4 4.053580223392806E-5 0.0 0.0 0.0 4.053580223392806E-5 5 4.053580223392806E-5 0.0 0.0 0.0 4.053580223392806E-5 6 1.2160740670178418E-4 0.0 0.0 0.0 4.053580223392806E-5 7 2.837506156374964E-4 0.0 0.0 4.053580223392806E-5 4.053580223392806E-5 8 2.837506156374964E-4 0.0 0.0 4.053580223392806E-5 4.053580223392806E-5 9 2.837506156374964E-4 0.0 0.0 4.053580223392806E-5 4.053580223392806E-5 10-11 2.837506156374964E-4 0.0 0.0 4.053580223392806E-5 4.053580223392806E-5 12-13 2.837506156374964E-4 0.0 0.0 4.053580223392806E-5 4.053580223392806E-5 14-15 3.6482222010535256E-4 0.0 0.0 8.107160446785612E-5 4.053580223392806E-5 16-17 3.850901212223166E-4 0.0 0.0 8.107160446785612E-5 4.053580223392806E-5 18-19 4.661617256901727E-4 0.0 0.0 1.0133950558482014E-4 4.053580223392806E-5 20-21 4.864296268071367E-4 0.0 0.0 3.040185167544605E-4 4.053580223392806E-5 22-23 5.269654290410648E-4 0.0 0.0 7.296444402107051E-4 4.053580223392806E-5 24-25 6.89108637976777E-4 0.0 0.0 0.0014998246826553384 4.053580223392806E-5 26-27 6.89108637976777E-4 0.0 0.0 0.002796970354141036 4.053580223392806E-5 28-29 8.512518469124893E-4 0.0 0.0 0.008471982666890965 4.053580223392806E-5 30-31 8.917876491464174E-4 0.0 0.0 0.03161792574246389 4.053580223392806E-5 32-33 8.917876491464174E-4 0.0 0.0 0.08048383533546416 4.053580223392806E-5 34-35 9.120555502633815E-4 0.0 0.0 0.14984059295771507 4.053580223392806E-5 36-37 9.728592536142734E-4 0.0 0.0 0.2629962848937253 4.053580223392806E-5 38-39 0.0010944666603160576 0.0 0.0 0.4430360505157167 4.053580223392806E-5 40-41 0.0010944666603160576 0.0 0.0 0.6621320615900979 4.053580223392806E-5 42-43 0.0011755382647839138 0.0 0.0 0.880721375136555 4.053580223392806E-5 44-45 0.001378217275953554 0.0 0.0 1.1465551661866553 6.080370335089209E-5 46-47 0.0014592888804214102 0.0 0.0 1.4709834593658984 8.107160446785612E-5 48-49 0.0014592888804214102 0.0 0.0 1.8206655573368788 8.107160446785612E-5 50-51 0.0014592888804214102 0.0 0.0 2.199736111927457 8.107160446785612E-5 52-53 0.0014795567815383743 0.0 0.0 2.583508819577171 8.107160446785612E-5 54-55 0.0014998246826553382 0.0 0.0 3.0029124973905077 8.107160446785612E-5 56-57 0.0015808962871231944 0.0 0.0 3.490578466165779 8.107160446785612E-5 58-59 0.0015808962871231944 0.0 0.0 4.015517105095148 8.107160446785612E-5 60-61 0.0016011641882401585 0.0 0.0 4.587659685725925 8.107160446785612E-5 62-63 0.0016214320893571225 0.0 0.0 5.156640473782456 8.107160446785612E-5 64-65 0.0016214320893571225 0.0 0.0 5.750348101201684 8.107160446785612E-5 66-67 0.0017025036938249785 0.0 0.0 6.424985457780949 8.107160446785612E-5 68-69 0.0017227715949419426 0.0 0.0 7.159879284380947 8.107160446785612E-5 70-71 0.0017835752982928348 0.0 0.0 7.973230156204714 8.107160446785612E-5 72-73 0.0018646469027606908 0.0 0.0 8.785344686060345 8.107160446785612E-5 74-75 0.001905182704994619 0.0 0.0 9.601593867743837 8.107160446785612E-5 76-77 0.001905182704994619 0.0 0.0 10.484990605827832 8.107160446785612E-5 78-79 0.001905182704994619 0.0 0.0 11.437156332401685 8.107160446785612E-5 80-81 0.002209201221749079 0.0 0.0 12.461070428929592 8.107160446785612E-5 82-83 0.0022294691228660433 0.0 0.0 13.499780093272882 8.107160446785612E-5 84-85 0.0022700049250999714 0.0 0.0 14.510114696052423 8.107160446785612E-5 86-87 0.0022700049250999714 0.0 0.0 15.546473283866142 8.107160446785612E-5 88-89 0.0022700049250999714 0.0 0.0 16.66043766505672 8.107160446785612E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8225 0.0 35.45638 1 GGTATCA 5095 0.0 35.295345 1 TCAACGC 10620 0.0 26.958067 4 ATCAACG 10685 0.0 26.927376 3 CAACGCA 10760 0.0 26.60245 5 AACGCAG 10935 0.0 26.263535 6 TATCAAC 11090 0.0 25.942427 2 GTACATG 14390 0.0 25.092896 1 TACATGG 14860 0.0 23.833591 2 ACATGGG 15170 0.0 22.62813 3 ACGCAGA 12890 0.0 22.096064 7 CGCAGAG 13045 0.0 21.61255 8 CATGGGG 7985 0.0 21.04865 4 GAGTACT 4095 0.0 19.75894 12-13 GCAGAGT 13680 0.0 19.56846 9 AGTACAT 11040 0.0 17.93232 2 CTAGACT 670 0.0 17.715815 4 AGTACTT 4430 0.0 17.675568 12-13 GAGTACA 12040 0.0 17.425367 1 GCTTATA 1450 0.0 17.061028 1 >>END_MODULE