##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920855_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2572733 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.761450955073844 31.0 30.0 33.0 23.0 34.0 2 28.78890580561605 31.0 29.0 34.0 22.0 34.0 3 28.862507691237294 31.0 29.0 34.0 22.0 34.0 4 32.346686189355836 35.0 33.0 37.0 24.0 37.0 5 32.317388162704795 35.0 33.0 37.0 24.0 37.0 6 32.44795243035325 35.0 33.0 37.0 25.0 37.0 7 32.28771971285011 35.0 32.0 37.0 23.0 37.0 8 32.23393760642865 35.0 32.0 37.0 23.0 37.0 9 33.51240684517204 37.0 33.0 39.0 23.0 39.0 10-11 33.3284231204715 37.0 33.0 39.0 22.0 39.0 12-13 33.16835598563861 37.0 33.0 39.0 19.0 39.0 14-15 33.951620902752055 38.0 33.0 40.0 18.5 41.0 16-17 33.843314094389115 38.0 33.0 40.0 18.0 41.0 18-19 33.72560502780506 38.0 32.0 40.0 17.5 41.0 20-21 33.63504219054212 38.0 32.0 40.0 18.0 41.0 22-23 33.41883106408632 38.0 32.0 40.0 17.5 41.0 24-25 33.23216925347481 38.0 32.0 40.0 16.0 41.0 26-27 33.26729590672643 38.0 32.0 40.0 16.0 41.0 28-29 33.11459739506587 38.0 32.0 40.0 14.0 41.0 30-31 32.87041348635867 38.0 31.5 40.0 10.0 41.0 32-33 32.63310456234673 38.0 31.0 40.0 9.0 41.0 34-35 32.31988881084823 37.5 30.5 40.0 8.5 41.0 36-37 32.021016755333726 37.0 30.0 40.0 8.0 41.0 38-39 31.828325753197085 37.0 30.0 40.0 4.5 41.0 40-41 31.629787467257582 37.0 30.0 40.0 2.0 41.0 42-43 31.40050483279843 37.0 30.0 40.0 2.0 41.0 44-45 31.126237157139897 36.0 30.0 40.0 2.0 41.0 46-47 30.878052250272376 36.0 29.0 39.0 2.0 41.0 48-49 30.579451890266107 36.0 28.5 39.0 2.0 40.0 50-51 29.41552485236517 34.5 27.0 38.0 2.0 39.5 52-53 29.85807505092833 34.5 28.0 38.5 2.0 39.5 54-55 30.515163641155148 36.0 29.0 39.0 2.0 40.0 56-57 30.46746086748994 36.0 28.5 39.0 2.0 41.0 58-59 30.224043847534897 35.0 28.0 39.0 2.0 41.0 60-61 29.898773016865725 35.0 28.0 39.0 2.0 40.0 62-63 29.50218619654663 35.0 28.0 39.0 2.0 40.0 64-65 29.077267054140478 34.0 26.5 38.0 2.0 40.0 66-67 28.694323312990505 34.0 26.0 37.5 2.0 40.0 68-69 28.249449321013877 34.0 26.0 37.0 2.0 39.5 70-71 27.92402903838059 34.0 26.0 36.5 2.0 39.0 72-73 27.46758058453792 33.5 25.0 36.0 2.0 39.0 74-75 27.029436012209583 33.0 24.5 35.5 2.0 38.5 76-77 26.616087833444045 33.0 23.5 35.0 2.0 37.5 78-79 26.159839750180062 33.0 22.0 35.0 2.0 37.0 80-81 25.7075011281777 32.0 20.0 35.0 2.0 36.0 82-83 25.23515304541902 32.0 18.5 35.0 2.0 36.0 84-85 24.83097488157535 32.0 17.0 35.0 2.0 35.5 86-87 24.36823992229275 31.5 9.0 34.0 2.0 35.0 88-89 23.822725871670322 31.0 3.5 34.0 2.0 35.0 90-91 23.315912688957617 31.0 2.0 34.0 2.0 35.0 92-93 22.779298901207394 31.0 2.0 34.0 2.0 35.0 94-95 22.14111588726852 30.0 2.0 34.0 2.0 35.0 96-97 21.49046675267119 30.0 2.0 34.0 2.0 35.0 98 21.088691675350688 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 124494.0 3 21092.0 4 15654.0 5 13196.0 6 11924.0 7 12203.0 8 13947.0 9 16154.0 10 17690.0 11 18537.0 12 19375.0 13 19741.0 14 18254.0 15 19267.0 16 20612.0 17 22030.0 18 22522.0 19 22589.0 20 23709.0 21 25204.0 22 27334.0 23 30591.0 24 34920.0 25 40633.0 26 47180.0 27 55221.0 28 64017.0 29 73968.0 30 85879.0 31 100903.0 32 121826.0 33 146674.0 34 182493.0 35 233362.0 36 298975.0 37 330387.0 38 198820.0 39 21356.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.05207688990445 17.980381405459408 13.204481016560873 24.763060688075274 2 16.266272999146207 19.622037190538915 38.68483218846276 25.426857621852122 3 19.385017070764167 23.430100060880932 28.969837114352735 28.215045754002162 4 13.757226512158969 15.615486380082563 35.65666355272074 34.97062355503773 5 14.944869014096007 36.308578008955166 33.693214268080325 15.053338708868505 6 33.932693216097306 34.257404263309866 17.112178880330063 14.697723640262769 7 29.56583939789762 31.176136717049204 20.701467935560117 18.556555949493063 8 26.955621562849014 33.894200959943525 19.941510851746763 19.208666625460697 9 27.018855046365093 15.588831021330234 19.345925130979392 38.04638880132528 10-11 26.047422341809728 25.0104315159077 27.2816936856047 21.66045245667787 12-13 26.499522079388075 22.383049386166462 27.190553692116502 23.926874842328957 14-15 23.768992896206406 24.00997108222897 24.62025868762413 27.600777333940492 16-17 23.964825555348888 26.923038798670344 25.341708682379092 23.770426963601672 18-19 23.955280712624937 26.181951731741826 26.757575586720467 23.105191968912774 20-21 24.775960025441186 25.442118387091128 26.28895195156061 23.492969635907084 22-23 24.534167169884146 25.17487455877684 26.200193142131447 24.090765129207572 24-25 24.19445866284144 25.40180800963359 26.23383705354017 24.169896273984794 26-27 24.056229000432754 25.60558983560165 26.20203346315989 24.1361477008057 28-29 24.16993780780586 25.695729230797955 26.175306459221936 23.959026502174257 30-31 24.31202588418813 25.549999134678785 25.94238827487813 24.19558670625495 32-33 24.073997398696005 25.599887099285564 25.87205013351559 24.45406536850284 34-35 24.396695672085652 25.525217316338512 25.97612665407054 24.101960357505295 36-37 24.505989565674167 25.313255486600056 25.938349655247485 24.242405292478292 38-39 24.29580422175648 25.409958063703325 25.938742145489847 24.355495569050348 40-41 24.43338291098565 25.35621484586976 26.097027645889764 24.11337459725483 42-43 24.41139427217264 25.229672058269685 25.912435764549507 24.44649790500816 44-45 24.246198936104182 25.257590904850147 25.996236118197285 24.499974040848386 46-47 24.338054911301825 25.213355169972708 25.915648661198137 24.532941257527327 48-49 24.10279258698073 25.360524239929777 25.89025980539673 24.646423367692766 50-51 23.962357453923534 25.487597544878255 26.01237084109698 24.53767416010123 52-53 24.1276134882611 25.24321214613702 26.106742685474526 24.522431680127355 54-55 23.94235660673782 25.175680729261764 26.236297293681936 24.645665370318476 56-57 23.81319206264023 25.310109851538098 26.14375244389462 24.732945641927053 58-59 23.87512184610364 25.043595237881462 26.19112495818097 24.890157957833928 60-61 23.718707820443594 24.95011172396937 26.461830929989304 24.86934952559773 62-63 23.73173891209012 25.047999124041603 26.356432702368735 24.86382926149954 64-65 23.660046761594565 25.013918536092216 26.261167782265083 25.06486692004814 66-67 23.686626889588627 25.028151069037456 26.206931305922478 25.078290735451443 68-69 23.76779434020567 24.88739303680508 26.21726297198056 25.127549651008696 70-71 23.579527772601914 24.765842289745837 26.286616256461837 25.36801368119041 72-73 23.616685781214734 24.85331478256527 26.231103372087194 25.298896064132805 74-75 23.654250010386168 25.000980103221938 26.20483942788498 25.139930458506914 76-77 23.72170286316792 24.861477705073362 26.294397690102087 25.122421741656627 78-79 23.66154154012806 24.968174779992992 26.191039476925422 25.179244202953527 80-81 23.680680753710558 24.882049845522655 26.245035910764802 25.192233490001986 82-83 23.67656975416179 24.831432554588503 26.29519506462687 25.196802626622837 84-85 23.734922344355642 24.822633887982605 26.225353030297416 25.21709073736434 86-87 23.754556429514547 24.7986589616119 26.326537776676933 25.120246832196624 88-89 23.732858629720646 24.709778683684814 26.206378995652972 25.35098369094157 90-91 23.765198487447154 24.692518856190432 26.217459123462206 25.324823532900208 92-93 23.940920752579466 24.53667934463629 26.23629709400182 25.286102808782424 94-95 23.87954567355616 24.5169572628365 26.32375655387314 25.2797405097342 96-97 24.06710896975606 24.35733501562223 26.254747774683306 25.3208082399384 98 24.15998489457215 24.271637101458772 26.145069064809384 25.42330893915969 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 66.0 1 50.5 2 79.5 3 127.5 4 128.5 5 155.5 6 228.0 7 436.5 8 683.5 9 752.5 10 744.5 11 804.5 12 923.0 13 1057.0 14 1162.5 15 1324.0 16 1464.5 17 1506.0 18 1522.5 19 1481.0 20 1466.5 21 1488.0 22 1565.0 23 1725.0 24 1917.5 25 2254.0 26 2861.5 27 3754.0 28 5206.0 29 7566.5 30 11234.5 31 16054.0 32 21055.0 33 26413.0 34 32474.5 35 38867.5 36 45367.5 37 52347.5 38 59132.0 39 64963.5 40 70471.0 41 75857.5 42 83001.0 43 90829.0 44 96851.5 45 102173.0 46 107557.5 47 111836.5 48 114845.5 49 116100.0 50 115896.0 51 115759.0 52 114938.0 53 113670.0 54 111169.0 55 106978.5 56 99631.5 57 91183.0 58 83901.5 59 74008.5 60 62379.5 61 51192.5 62 40816.5 63 31076.0 64 23152.0 65 17824.5 66 13547.5 67 10141.0 68 7583.5 69 5708.0 70 4234.5 71 3174.5 72 2518.0 73 1980.5 74 1505.5 75 1057.5 76 680.0 77 426.5 78 250.0 79 121.0 80 69.0 81 39.0 82 28.0 83 20.5 84 12.5 85 7.0 86 8.0 87 9.0 88 5.0 89 4.0 90 6.0 91 4.5 92 2.5 93 3.5 94 3.5 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4029955693031496 2 0.026469905738372383 3 0.019395716539570954 4 0.016869220397141872 5 0.022777334453283726 6 0.023321502853191525 7 0.016052967797280167 8 0.011272059712375906 9 0.0 10-11 1.943458571099294E-5 12-13 0.005052992284858165 14-15 0.00363426752795568 16-17 0.007132492955934409 18-19 0.03892747517911886 20-21 0.08154752164332638 22-23 0.10125419155427322 24-25 0.06720479738861358 26-27 0.07756343157257282 28-29 0.05869244884719868 30-31 0.055718957233416765 32-33 0.02182503975344507 34-35 0.3594037935533924 36-37 0.5503291635781871 38-39 0.5013345730007739 40-41 0.5096525756850789 42-43 0.45649898376551323 44-45 0.42818279238459644 46-47 0.42691954431338197 48-49 0.41590013421524896 50-51 0.4111969644731886 52-53 0.4786349768903342 54-55 0.4794706640759068 56-57 0.44713151345281454 58-59 0.4314478027840433 60-61 0.44738416306705747 62-63 0.4262976375706301 64-65 0.4780325047332934 66-67 0.5007709700151551 68-69 0.43842481905428976 70-71 0.3922093742335485 72-73 0.37611753726484637 74-75 0.3586652792963747 76-77 0.3559055681254137 78-79 0.3545451471256442 80-81 0.37213344719409286 82-83 0.36698328198067964 84-85 0.3677606654091194 86-87 0.35168826302612827 88-89 0.4000415122750787 90-91 0.37504863505074176 92-93 0.3639126174383428 94-95 0.3713560637656531 96-97 0.37153097503705207 98 0.36599211810941906 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2572733.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.182979681760784 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55383204225097 45.30683886317466 2 12.170947581475916 14.406258868445294 3 4.600051060287972 8.167341853082553 4 2.317850044816671 5.487090884310134 5 1.241075542702665 3.6725274313651033 6 0.7808147813663765 2.772656720449485 7 0.5227853952097217 2.1657998195832766 8 0.34884335054375376 1.6516471141878666 9 0.25885021786698426 1.3787574466176973 >10 1.14570938932783 11.42122762777943 >50 0.04413779137101802 1.745903456472855 >100 0.014508454669933371 1.5119059897376208 >500 3.9623207339650615E-4 0.16794247806130078 >1k 1.9811603669776914E-4 0.1441014467327899 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.886917142198588E-5 2 0.0 0.0 0.0 0.0 3.886917142198588E-5 3 0.0 0.0 0.0 0.0 3.886917142198588E-5 4 0.0 0.0 0.0 0.0 3.886917142198588E-5 5 0.0 0.0 0.0 0.0 3.886917142198588E-5 6 0.0 0.0 0.0 0.0 3.886917142198588E-5 7 0.0 0.0 0.0 0.0 3.886917142198588E-5 8 3.886917142198588E-5 0.0 0.0 0.0 3.886917142198588E-5 9 3.886917142198588E-5 0.0 0.0 0.0 3.886917142198588E-5 10-11 3.886917142198588E-5 0.0 0.0 3.886917142198588E-5 7.773834284397177E-5 12-13 3.886917142198588E-5 0.0 0.0 3.886917142198588E-5 7.773834284397177E-5 14-15 3.886917142198588E-5 0.0 0.0 5.8303757132978824E-5 7.773834284397177E-5 16-17 3.886917142198588E-5 0.0 0.0 7.773834284397177E-5 7.773834284397177E-5 18-19 3.886917142198588E-5 0.0 0.0 7.773834284397177E-5 7.773834284397177E-5 20-21 3.886917142198588E-5 0.0 0.0 1.1660751426595765E-4 7.773834284397177E-5 22-23 3.886917142198588E-5 0.0 0.0 3.1095337137588706E-4 7.773834284397177E-5 24-25 3.886917142198588E-5 0.0 0.0 0.0011272059712375906 7.773834284397177E-5 26-27 3.886917142198588E-5 0.0 0.0 0.002604234485273054 7.773834284397177E-5 28-29 3.886917142198588E-5 0.0 0.0 0.008181960584328027 7.773834284397177E-5 30-31 3.886917142198588E-5 0.0 0.0 0.031484028851808565 7.773834284397177E-5 32-33 3.886917142198588E-5 0.0 0.0 0.0861923876282537 7.773834284397177E-5 34-35 3.886917142198588E-5 1.943458571099294E-5 0.0 0.16280352450098787 7.773834284397177E-5 36-37 3.886917142198588E-5 3.886917142198588E-5 0.0 0.28838981736542424 7.773834284397177E-5 38-39 3.886917142198588E-5 3.886917142198588E-5 0.0 0.489945905774132 7.773834284397177E-5 40-41 3.886917142198588E-5 3.886917142198588E-5 0.0 0.7192157134067158 7.773834284397177E-5 42-43 3.886917142198588E-5 3.886917142198588E-5 0.0 0.958105640966241 7.773834284397177E-5 44-45 3.886917142198588E-5 3.886917142198588E-5 0.0 1.2569707000298904 9.71729285549647E-5 46-47 3.886917142198588E-5 3.886917142198588E-5 0.0 1.6096889960987013 1.3604209997695058E-4 48-49 3.886917142198588E-5 3.886917142198588E-5 0.0 1.9733100947513793 1.5547668568794353E-4 50-51 3.886917142198588E-5 3.886917142198588E-5 0.0 2.3528869882727825 1.5547668568794353E-4 52-53 3.886917142198588E-5 3.886917142198588E-5 0.0 2.7376529161790204 2.3321502853191527E-4 54-55 3.886917142198588E-5 3.886917142198588E-5 0.0 3.1785459276186065 2.3321502853191527E-4 56-57 3.886917142198588E-5 3.886917142198588E-5 0.0 3.6926490234315024 2.5264961424290825E-4 58-59 3.886917142198588E-5 3.886917142198588E-5 0.0 4.241831546452741 2.7208419995390117E-4 60-61 3.886917142198588E-5 3.886917142198588E-5 0.0 4.816259596312559 2.7208419995390117E-4 62-63 3.886917142198588E-5 3.886917142198588E-5 0.0 5.3930003618719855 2.7208419995390117E-4 64-65 3.886917142198588E-5 3.886917142198588E-5 0.0 6.020426526965682 2.7208419995390117E-4 66-67 3.886917142198588E-5 3.886917142198588E-5 0.0 6.749320664056472 2.7208419995390117E-4 68-69 3.886917142198588E-5 3.886917142198588E-5 0.0 7.543029144493424 2.7208419995390117E-4 70-71 3.886917142198588E-5 3.886917142198588E-5 0.0 8.363596222382967 2.7208419995390117E-4 72-73 3.886917142198588E-5 3.886917142198588E-5 0.0 9.183055528886985 2.7208419995390117E-4 74-75 3.886917142198588E-5 3.886917142198588E-5 0.0 10.031491802686093 2.915187856648941E-4 76-77 3.886917142198588E-5 3.886917142198588E-5 0.0 10.966334244556275 3.1095337137588706E-4 78-79 3.886917142198588E-5 3.886917142198588E-5 0.0 11.980178277341643 3.1095337137588706E-4 80-81 3.886917142198588E-5 3.886917142198588E-5 0.0 13.020084089565454 3.3038795708688E-4 82-83 3.886917142198588E-5 3.886917142198588E-5 0.0 14.067569390216551 3.498225427978729E-4 84-85 3.886917142198588E-5 3.886917142198588E-5 0.0 15.135869132164123 3.498225427978729E-4 86 3.886917142198588E-5 3.886917142198588E-5 0.0 15.959604047524559 3.498225427978729E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2475 0.0 42.9557 1 GTATCAA 4130 0.0 42.56938 1 TCAACGC 5350 0.0 32.565357 4 ATCAACG 5415 0.0 32.25912 3 CAACGCA 5585 0.0 31.113012 5 TATCAAC 5615 0.0 31.029037 2 AACGCAG 5865 0.0 29.779947 6 GTACATG 8635 0.0 26.169968 1 TACATGG 8810 0.0 24.616123 2 ACGCAGA 7030 0.0 24.584023 7 ACATGGG 9180 0.0 23.124073 3 CGCAGAG 7395 0.0 23.1222 8 CATGGGG 6375 0.0 20.56894 4 GCAGAGT 8340 0.0 19.403297 9 TAAGGCG 480 0.0 19.10358 5 TATACCG 240 2.0537482E-7 19.10358 5 GTGGTAT 1595 0.0 18.178745 1 GAGTACA 6600 0.0 17.781986 1 AGAGTAC 6905 0.0 17.659765 10-11 AGTACAT 6480 0.0 17.335068 2 >>END_MODULE