##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920855_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2572733 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.263636762928762 31.0 30.0 34.0 27.0 34.0 2 30.28447569180323 31.0 30.0 34.0 26.0 34.0 3 30.423717501971637 31.0 30.0 34.0 27.0 34.0 4 34.06393473399688 35.0 35.0 37.0 30.0 37.0 5 33.58763385085044 35.0 35.0 37.0 28.0 37.0 6 33.53118687403629 35.0 35.0 37.0 28.0 37.0 7 33.35056766481403 35.0 35.0 37.0 27.0 37.0 8 33.282972232252625 35.0 33.0 37.0 27.0 37.0 9 34.62702386916948 38.0 35.0 39.0 27.0 39.0 10-11 34.43076623186316 38.0 34.0 39.0 27.0 39.0 12-13 34.2496426951417 37.0 34.0 39.0 26.5 39.0 14-15 35.148478680065125 38.0 34.0 40.0 26.0 41.0 16-17 35.01587514133802 38.0 34.0 40.0 25.5 41.0 18-19 34.92629724887891 38.5 34.0 40.0 25.0 41.0 20-21 34.80915061920533 38.0 34.0 40.0 25.0 41.0 22-23 34.66061227496208 38.0 34.0 40.0 24.5 41.0 24-25 34.475633110781416 38.0 33.0 40.0 24.0 41.0 26-27 34.28616591772251 38.0 33.0 40.0 23.0 41.0 28-29 34.22008949238028 38.0 33.0 40.0 23.0 41.0 30-31 34.211684034060276 38.0 33.0 40.0 23.0 41.0 32-33 34.068822532303194 38.0 33.0 40.0 22.0 41.0 34-35 33.898104272771405 38.0 33.0 40.0 21.0 41.0 36-37 33.69899985735014 38.0 33.0 40.0 19.0 41.0 38-39 33.51132667089823 38.0 32.0 40.0 18.5 41.0 40-41 33.284470444465086 38.0 32.0 40.0 17.0 41.0 42-43 33.314348787845454 38.0 32.0 40.0 17.0 41.0 44-45 33.16831769950477 38.0 32.0 40.0 15.0 41.0 46-47 32.91668140456083 37.5 32.0 40.0 14.5 41.0 48-49 32.65342944642914 37.0 31.0 40.0 10.5 41.0 50-51 32.38990929101465 37.0 31.0 40.0 9.0 41.0 52-53 32.12559426104458 37.0 31.0 40.0 8.0 41.0 54-55 31.828240435365814 36.0 30.0 39.5 7.0 41.0 56-57 31.4925143806217 36.0 30.0 39.0 4.0 41.0 58-59 31.138064462966035 35.5 29.5 39.0 2.0 40.0 60-61 30.790068965570853 35.0 29.0 39.0 2.0 40.0 62-63 30.453348248730045 35.0 28.5 38.5 2.0 40.0 64-65 30.037658979769763 35.0 28.0 38.0 2.0 40.0 66-67 29.59456092023541 34.0 28.0 37.5 2.0 40.0 68-69 29.141341717154482 34.0 27.5 37.0 2.0 39.5 70-71 28.71827993810473 34.0 26.5 36.5 2.0 39.0 72-73 28.289583878311507 34.0 26.0 36.0 2.0 39.0 74-75 27.853300167564996 33.0 26.0 35.5 2.0 38.0 76-77 26.405588143036994 31.5 24.0 34.0 2.0 36.0 78-79 27.25132339811399 33.0 26.0 35.0 2.0 37.0 80-81 27.291404315955056 33.0 26.0 35.0 2.0 36.5 82-83 26.96529099599531 33.0 25.0 35.0 2.0 36.0 84-85 26.660141374950296 33.0 25.0 35.0 2.0 36.0 86-87 26.130420257368332 32.5 24.0 35.0 2.0 35.0 88-89 25.771408848100442 32.0 22.5 35.0 2.0 35.0 90-91 25.409280714322087 32.0 20.0 34.5 2.0 35.0 92-93 25.10880763763671 32.0 19.5 34.0 2.0 35.0 94-95 24.740331779473422 32.0 17.5 34.0 2.0 35.0 96-97 24.222432914725314 32.0 6.0 34.0 2.0 35.0 98-99 23.62771710084179 31.0 2.0 34.0 2.0 35.0 100-101 21.409115909035258 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 59354.0 3 27094.0 4 14669.0 5 10672.0 6 9173.0 7 9244.0 8 10249.0 9 12008.0 10 13390.0 11 15130.0 12 16427.0 13 18327.0 14 19540.0 15 20592.0 16 21959.0 17 22860.0 18 22268.0 19 21510.0 20 21566.0 21 22458.0 22 24545.0 23 27902.0 24 32188.0 25 37887.0 26 44743.0 27 52528.0 28 61908.0 29 73206.0 30 86125.0 31 102127.0 32 122649.0 33 149746.0 34 189318.0 35 245883.0 36 327588.0 37 379601.0 38 211555.0 39 14743.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11958902930547 19.33042980094459 13.789039665035748 24.760941504714186 2 16.27965280501319 20.635565369589457 37.637718332994524 25.447063492402826 3 19.15933536436744 24.286964360754883 29.31340447524643 27.24029579963124 4 14.06660672224937 16.599200041362426 35.16653624285342 34.16765699353479 5 14.847793874127134 36.72332350137839 33.7236313654393 14.705251259055169 6 33.85179654057815 34.81332639679809 16.842589807573404 14.492287255050357 7 29.40087925331199 31.381301192137943 20.62107483151018 18.59674472303988 8 26.915591200958005 34.10043249541644 19.95382771870246 19.0301485849231 9 26.723943975567355 15.44221886772476 19.266864978190142 38.56697217851774 10-11 25.942361333785772 25.12514748413086 27.37151758446677 21.560973597616595 12-13 26.385951422092802 22.46472348292784 27.2542784974058 23.895046597573554 14-15 23.65018998090073 24.099672650688866 24.552677088505728 27.697460279904675 16-17 23.945708622583446 27.132911658270505 25.23799929677606 23.68338042236999 18-19 23.96162728864453 26.2562527205826 26.637241260195253 23.144878730577616 20-21 24.7481851581035 25.469980816792102 26.227374381289536 23.55445964381486 22-23 24.45728466007241 25.34018239926989 26.18145512113172 24.021077819525985 24-25 24.206741749575546 25.5748913999494 26.17390047978675 24.0444663706883 26-27 24.057331674600878 25.75254094695939 26.17073755576295 24.019389822676782 28-29 24.051007484929237 25.723460853341816 26.248599662246896 23.976931999482055 30-31 24.31471385540705 25.5280691812957 26.0520803667845 24.105136596512747 32-33 24.022423045929916 25.706076132209265 25.89006408667497 24.38143673518585 34-35 24.301444017356356 25.61718591757481 26.100896548050912 23.980473517017927 36-37 24.46541629966352 25.404328767687833 25.94714027195589 24.183114660692752 38-39 24.312970881139947 25.439761235534565 25.932761176823266 24.31450670650222 40-41 24.374566619616488 25.342850416774148 26.15375164774454 24.128831315864826 42-43 24.388881405585888 25.19857479036547 26.014876806367297 24.39766699768134 44-45 24.098587623009998 25.32828910202652 26.06694201155733 24.50618126340615 46-47 24.248700795124464 25.17534478431284 26.0053078285903 24.57064659197239 48-49 24.01568428972399 25.33118912439813 25.962245829511676 24.690880756366205 50-51 23.822175813952946 25.45065511401396 26.112037743088635 24.61513132894446 52-53 24.0703686650544 25.280794599787644 26.109986315217242 24.538850419940715 54-55 23.892184120379227 25.183388767860727 26.139653802435387 24.784773309324663 56-57 23.784499015875625 25.384966870954834 25.94646293436016 24.884071178809382 58-59 23.72403544682859 25.278468593764696 26.07226345523396 24.925232504172754 60-61 23.68049919570785 25.26923618974491 26.137716199075673 24.91254841547157 62-63 23.54883344765262 25.38632565116803 26.009130900668172 25.055710000511183 64-65 23.43220461693022 25.314439524775672 25.90387333052549 25.349482527768618 66-67 23.426213874433856 25.28570414778709 25.91649986535999 25.371582112419055 68-69 23.5093817717796 25.157348438575948 25.89880602705405 25.434463762590404 70-71 23.314999887254555 24.885971589702997 26.000382556957835 25.798645966084617 72-73 23.254553769123266 24.918902817927783 25.887324885693996 25.939218527254955 74-75 23.14929811208305 25.037390127294685 25.87038906156178 25.94292269906049 76-77 23.15675413204138 24.84881397201295 26.137081047713913 25.857350848231754 78-79 23.072341696860583 24.88677767032365 25.994045761972078 26.046834870843682 80-81 22.91952605144531 24.799804999758 26.054749738998627 26.22591920979806 82-83 22.802142267924214 24.80286998904531 26.083107151492722 26.311880591537758 84-85 22.753144609162298 24.691331388440698 26.03355221636318 26.52197178603382 86-87 22.711393591114742 24.694117133494018 26.10112765075099 26.493361624640254 88-89 22.614889574653432 24.5854086533854 26.009072015577956 26.79062975638321 90-91 22.443426234341576 24.549371227222053 26.01528978033047 26.9919127581059 92-93 22.43668612185381 24.389603580732267 26.064873075773804 27.10883722164012 94-95 22.174527014788342 24.306682235253053 26.25714132456849 27.261649425390118 96-97 22.23906411344546 24.175786586395695 26.27382323736565 27.311326062793196 98-99 22.150476026850146 24.165344747767765 26.16169170376526 27.522487521616824 100-101 22.189227151529003 23.966471358911672 26.219711409420754 27.624590080138567 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 48.0 2 59.0 3 77.0 4 68.0 5 80.5 6 135.5 7 270.0 8 418.0 9 452.0 10 390.0 11 321.5 12 307.0 13 340.5 14 370.5 15 401.0 16 452.0 17 504.5 18 588.0 19 679.0 20 760.0 21 872.5 22 1060.5 23 1268.5 24 1472.5 25 1804.5 26 2302.0 27 3008.5 28 4039.0 29 5812.0 30 8571.0 31 12536.5 32 17589.5 33 22569.5 34 27376.5 35 32657.0 36 39132.0 37 45807.5 38 52351.0 39 58333.0 40 63906.5 41 69923.0 42 76441.0 43 83762.0 44 90350.0 45 96629.0 46 102650.5 47 107360.5 48 111567.5 49 114772.5 50 115381.0 51 114678.5 52 113894.5 53 113716.0 54 112075.0 55 107070.0 56 100074.0 57 91534.5 58 83544.0 59 74545.0 60 63017.5 61 51770.0 62 41463.0 63 31615.5 64 23487.0 65 17944.0 66 13886.5 67 10490.0 68 7809.0 69 5785.5 70 4274.0 71 3224.5 72 2475.0 73 1999.0 74 1511.5 75 1065.0 76 728.5 77 447.0 78 264.5 79 141.5 80 69.5 81 34.5 82 21.5 83 10.5 84 5.0 85 4.5 86 1.5 87 0.0 88 0.0 89 0.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1965225307095606 2 0.0 3 0.012282658169347538 4 0.013604209997695058 5 0.006568889970315613 6 0.10751212815321295 7 0.14517635526111725 8 0.12539194700732645 9 0.1442434951469896 10-11 0.11524709326618814 12-13 0.11520822409476617 14-15 0.11664638343737964 16-17 0.06673836733154975 18-19 0.07975953975791503 20-21 0.03702288577944155 22-23 0.08409345237146645 24-25 0.05777902331878201 26-27 0.06582494180313309 28-29 0.04011298490748943 30-31 0.025284396010001813 32-33 0.03208650100884934 34-35 0.020756137539340462 36-37 0.025711956895643658 38-39 0.032105935594560334 40-41 0.025517611038533727 42-43 0.013196083697764207 44-45 0.026664251595482313 46-47 0.0338744828942607 48-49 0.008648390641391859 50-51 0.015333888125973432 52-53 0.006510586213182634 54-55 0.012787957397833354 56-57 0.005499987756211002 58-59 0.003537094599400715 60-61 0.02314659158179259 62-63 0.010086549984005336 64-65 0.006977016270246465 66-67 0.041220756293016025 68-69 0.0902930852132732 70-71 0.022038820196265994 72-73 0.04380555619257809 74-75 0.08557048088550193 76-77 0.2599958876416636 78-79 0.08267472761456396 80-81 0.01665543995432095 82-83 0.012399265683613495 84-85 0.013779121269093995 86-87 0.2738333126678905 88-89 0.6335674941783698 90-91 0.2682555865688356 92-93 0.3589567980820396 94-95 0.0012049443140815623 96-97 0.004411650956395397 98-99 0.003265010399446814 100-101 0.004916950184881213 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2572733.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.94466721504813 #Duplication Level Percentage of deduplicated Percentage of total 1 74.67033547975558 42.52077404730682 2 13.0679146419769 14.882961009640583 3 5.041791980588903 8.613094995064003 4 2.448690296050647 5.577594160852871 5 1.369692295373721 3.899833597353597 6 0.8663982895331305 2.9602057363890615 7 0.5466462727836406 2.1790013061607585 8 0.39656840339805577 1.8065964607604192 9 0.2775951946272729 1.4226809380691914 >10 1.2473455552743105 11.999233325807046 >50 0.049277736474277314 1.8966980592015306 >100 0.016852333902096766 1.6889388199337676 >500 6.172063348336902E-4 0.2725033777499714 >1k 2.743139265912179E-4 0.2798841657102901 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT 2577 0.10016585475445762 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.773834284397177E-5 2 0.0 0.0 0.0 0.0 7.773834284397177E-5 3 0.0 0.0 0.0 0.0 7.773834284397177E-5 4 0.0 0.0 0.0 0.0 7.773834284397177E-5 5 0.0 0.0 0.0 0.0 7.773834284397177E-5 6 0.0 0.0 0.0 0.0 7.773834284397177E-5 7 0.0 0.0 0.0 0.0 7.773834284397177E-5 8 0.0 0.0 0.0 0.0 7.773834284397177E-5 9 0.0 0.0 0.0 0.0 7.773834284397177E-5 10-11 0.0 0.0 0.0 0.0 7.773834284397177E-5 12-13 0.0 0.0 0.0 0.0 1.5547668568794353E-4 14-15 0.0 0.0 0.0 1.943458571099294E-5 1.5547668568794353E-4 16-17 0.0 0.0 0.0 3.886917142198588E-5 1.5547668568794353E-4 18-19 0.0 0.0 0.0 3.886917142198588E-5 1.7491127139893645E-4 20-21 0.0 0.0 0.0 7.773834284397177E-5 1.943458571099294E-4 22-23 0.0 0.0 0.0 2.915187856648941E-4 1.943458571099294E-4 24-25 0.0 0.0 0.0 0.0010689022141046117 2.1378044282092235E-4 26-27 0.0 0.0 0.0 0.0025070615567180893 2.3321502853191527E-4 28-29 0.0 0.0 0.0 0.008084787655773064 2.3321502853191527E-4 30-31 0.0 0.0 0.0 0.031250813823276644 2.3321502853191527E-4 32-33 0.0 3.886917142198588E-5 0.0 0.0856482192283459 2.3321502853191527E-4 34-35 0.0 3.886917142198588E-5 0.0 0.16122932305839743 2.7208419995390117E-4 36-37 0.0 3.886917142198588E-5 0.0 0.2853968911659313 2.7208419995390117E-4 38-39 0.0 3.886917142198588E-5 0.0 0.48557312398915864 2.7208419995390117E-4 40-41 0.0 3.886917142198588E-5 0.0 0.7144153707361005 2.7208419995390117E-4 42-43 0.0 3.886917142198588E-5 0.0 0.9530915178528048 3.1095337137588706E-4 44-45 0.0 3.886917142198588E-5 0.0 1.2508099363595058 3.1095337137588706E-4 46-47 0.0 3.886917142198588E-5 0.0 1.6013515588286853 3.1095337137588706E-4 48-49 0.0 3.886917142198588E-5 0.0 1.9615521703962284 3.1095337137588706E-4 50-51 0.0 3.886917142198588E-5 0.0 2.3358622911899527 3.1095337137588706E-4 52-53 0.0 3.886917142198588E-5 0.0 2.7148367125543147 3.498225427978729E-4 54-55 0.0 3.886917142198588E-5 0.0 3.1498799136948916 3.498225427978729E-4 56-57 0.0 3.886917142198588E-5 0.0 3.658172068380201 3.498225427978729E-4 58-59 0.0 3.886917142198588E-5 0.0 4.201116089388211 3.498225427978729E-4 60-61 0.0 3.886917142198588E-5 0.0 4.767245571149435 3.498225427978729E-4 62-63 0.0 3.886917142198588E-5 0.0 5.336115329495909 3.498225427978729E-4 64-65 0.0 3.886917142198588E-5 0.0 5.957380730919221 3.498225427978729E-4 66-67 0.0 3.886917142198588E-5 0.0 6.673953340669241 3.498225427978729E-4 68-69 0.0 3.886917142198588E-5 0.0 7.45310531640866 3.498225427978729E-4 70-71 0.0 3.886917142198588E-5 0.0 8.260476310600438 3.498225427978729E-4 72-73 0.0 3.886917142198588E-5 0.0 9.068410907777837 3.692571285088659E-4 74-75 0.0 3.886917142198588E-5 0.0 9.911094544206492 3.886917142198588E-4 76-77 0.0 3.886917142198588E-5 0.0 10.839368096106359 3.886917142198588E-4 78-79 0.0 3.886917142198588E-5 0.0 11.841395900779442 3.886917142198588E-4 80-81 0.0 3.886917142198588E-5 0.0 12.87067099461934 4.081262999308517E-4 82-83 0.0 3.886917142198588E-5 0.0 13.906728758872374 4.275608856418447E-4 84-85 0.0 3.886917142198588E-5 0.0 14.966166329735731 4.6643005706383054E-4 86-87 0.0 3.886917142198588E-5 0.0 16.070322882320085 5.052992284858165E-4 88-89 0.0 3.886917142198588E-5 0.0 17.247320262149238 5.441683999078023E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4310 0.0 43.259163 1 GGTATCA 2355 0.0 41.60501 1 TCAACGC 5530 0.0 33.135513 4 ATCAACG 5660 0.0 32.709938 3 TATCAAC 5720 0.0 31.783407 2 CAACGCA 5770 0.0 31.589024 5 AACGCAG 5945 0.0 30.97852 6 ACGCAGA 7010 0.0 25.933525 7 CGCAGAG 7420 0.0 24.43324 8 GTACATG 8460 0.0 24.231276 1 TACATGG 8550 0.0 23.206406 2 ACATGGG 8875 0.0 21.983912 3 TAAGGCG 625 0.0 21.264679 5 GCAGAGT 8430 0.0 20.662222 9 CGCTAAC 120 0.004783889 19.778187 2 AGAGTAC 7130 0.0 19.435036 10-11 CATGGGG 6335 0.0 18.359083 4 GTATTAA 1150 0.0 17.78443 1 GTATAGG 405 2.7284841E-11 17.615929 1 GAGTACA 6580 0.0 17.565062 1 >>END_MODULE