##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920854_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2854122 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.520542219288455 31.0 29.0 33.0 22.0 34.0 2 28.552369520293805 31.0 28.0 34.0 16.0 34.0 3 28.619279764495 31.0 28.0 34.0 18.0 34.0 4 32.09047370785131 35.0 32.0 37.0 22.0 37.0 5 32.04926944258164 35.0 32.0 37.0 22.0 37.0 6 32.16893146123396 35.0 32.0 37.0 23.0 37.0 7 32.00538484339492 35.0 32.0 37.0 22.0 37.0 8 31.953602894340186 35.0 32.0 37.0 21.0 37.0 9 33.209431832276266 37.0 33.0 39.0 19.0 39.0 10-11 33.01714415151139 37.0 32.0 39.0 18.0 39.0 12-13 32.84091044461309 37.0 32.0 39.0 17.0 39.0 14-15 33.59084177200554 38.0 32.0 40.0 17.0 41.0 16-17 33.47503295234051 38.0 32.0 40.0 17.0 41.0 18-19 33.35697790774185 38.0 32.0 40.0 17.0 41.0 20-21 33.26047152153973 38.0 32.0 40.0 16.0 41.0 22-23 33.034623782725475 38.0 32.0 40.0 12.0 41.0 24-25 32.83053124568606 38.0 32.0 40.0 10.0 41.0 26-27 32.8646382320027 38.0 32.0 40.0 10.0 41.0 28-29 32.70733941996873 38.0 31.5 40.0 9.5 41.0 30-31 32.46073923959803 37.5 31.0 40.0 8.5 41.0 32-33 32.21169715239923 37.0 30.5 40.0 8.0 41.0 34-35 31.881952313180726 37.0 30.0 40.0 5.0 41.0 36-37 31.566773074171323 37.0 30.0 40.0 2.0 41.0 38-39 31.363162121310864 37.0 30.0 40.0 2.0 41.0 40-41 31.161017819140177 37.0 30.0 40.0 2.0 41.0 42-43 30.922676045382783 36.0 29.5 40.0 2.0 41.0 44-45 30.634162625143567 36.0 28.5 39.0 2.0 41.0 46-47 30.381346172307982 36.0 28.0 39.0 2.0 40.0 48-49 30.067828039586253 35.0 27.5 39.0 2.0 40.0 50-51 28.922840894677943 34.0 25.5 38.0 2.0 39.5 52-53 29.367900356046448 34.5 27.0 38.5 2.0 39.5 54-55 30.006455400294733 35.0 28.0 39.0 2.0 40.0 56-57 29.953968505901287 35.0 28.0 39.0 2.0 40.5 58-59 29.699063845203533 35.0 28.0 39.0 2.0 40.0 60-61 29.368707434370357 35.0 27.0 39.0 2.0 40.0 62-63 28.972008554644823 34.5 26.0 38.5 2.0 40.0 64-65 28.544341131878735 34.0 26.0 38.0 2.0 40.0 66-67 28.146463605970595 34.0 26.0 37.5 2.0 40.0 68-69 27.687260215225557 34.0 25.0 37.0 2.0 39.0 70-71 27.359811879099773 33.5 24.0 36.0 2.0 39.0 72-73 26.89458386852419 33.0 23.0 36.0 2.0 39.0 74-75 26.449934515763516 33.0 22.0 35.0 2.0 38.0 76-77 26.035068402822304 32.5 20.5 35.0 2.0 37.0 78-79 25.57684254562349 32.0 19.5 35.0 2.0 37.0 80-81 25.124981342773715 32.0 17.5 35.0 2.0 36.0 82-83 24.64876010906331 31.5 12.0 35.0 2.0 36.0 84-85 24.24950387544751 31.0 7.0 34.5 2.0 35.0 86-87 23.79016366504305 31.0 2.0 34.0 2.0 35.0 88-89 23.25272710837168 31.0 2.0 34.0 2.0 35.0 90-91 22.746797088561735 30.5 2.0 34.0 2.0 35.0 92-93 22.192634547507076 30.0 2.0 34.0 2.0 35.0 94-95 21.55055460138004 29.5 2.0 34.0 2.0 35.0 96-97 20.900282468654108 29.0 2.0 34.0 2.0 35.0 98 20.499361625046163 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 152652.0 3 25513.0 4 18784.0 5 15423.0 6 14618.0 7 14867.0 8 16796.0 9 19376.0 10 21026.0 11 22239.0 12 23595.0 13 23050.0 14 21454.0 15 22541.0 16 24137.0 17 26031.0 18 26747.0 19 26875.0 20 27739.0 21 29282.0 22 31877.0 23 35785.0 24 40447.0 25 46572.0 26 53864.0 27 61648.0 28 71609.0 29 83318.0 30 96207.0 31 113448.0 32 135058.0 33 162291.0 34 201182.0 35 253695.0 36 322314.0 37 350843.0 38 201486.0 39 19733.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.90548261352922 18.09280055163873 13.361970701228524 24.639746133603524 2 16.2793721465468 19.538393763661617 38.5876766919902 25.59455739780138 3 19.40567564479875 23.61352235795293 28.583338648395003 28.397463348853314 4 13.592078205884786 15.713086225240014 35.97359261787583 34.72124295099937 5 14.950320966055786 36.26476606819122 33.691500401098054 15.093412564654937 6 33.854731217953635 34.39028723843808 17.121076242612975 14.633905300995309 7 29.643994391824485 30.90523816348722 20.73230773759317 18.71845970709513 8 27.13882395649625 33.41367001387262 20.04570710937574 19.40179892025539 9 27.102485457874607 15.411779874861692 19.336874877808306 38.14885978945539 10-11 25.959822320139082 24.94241661708925 27.30004183423133 21.797719228540334 12-13 26.587497082998418 22.34493289669995 27.098909654591974 23.968660365709656 14-15 24.022400002803064 23.880442218732014 24.537077996193084 27.560079782271835 16-17 23.990211423579833 26.717056671498586 25.360633145978245 23.93209875894334 18-19 23.982484727763556 25.976857072055793 26.731434712218803 23.309223487961845 20-21 24.88096866156808 25.25557811464459 26.307994684003265 23.555458539784063 22-23 24.628943885106057 25.06727025174787 26.08389982274043 24.21988604040564 24-25 24.30946616387271 25.3306619409504 26.101436595072116 24.25843530010478 26-27 24.067103111091008 25.501317625962532 26.081613038562406 24.349966224384048 28-29 24.134788516714206 25.52621910347129 26.133790067675772 24.20520231213873 30-31 24.48480104132687 25.381115503532058 25.871577515206322 24.262505939934748 32-33 24.164693517844725 25.535650110556496 25.709067594970907 24.59058877662787 34-35 24.578457000715233 25.476644590866286 25.751238291351335 24.193660117067147 36-37 24.61948038473239 25.234723858273806 25.725460062989967 24.420335694003832 38-39 24.447168498741867 25.32721958825892 25.77136525536043 24.454246657638787 40-41 24.533619721630714 25.221574984200572 25.920535699664182 24.32426959450453 42-43 24.472720725680315 25.164947744181532 25.770655185164394 24.59167634497376 44-45 24.34810882940404 25.253155469973947 25.855974455015463 24.542761245606552 46-47 24.455002470303572 25.204169534611697 25.683309897119948 24.65751809796478 48-49 24.298840662166114 25.208450874205013 25.70473944146513 24.787969022163743 50-51 24.21000615187803 25.302074451269895 25.797813435722727 24.690105961129348 52-53 24.278716753233446 25.13169851030968 25.966091264259934 24.62349347219694 54-55 24.101748919577865 25.171133585065093 26.047688204694886 24.67942929066216 56-57 24.031237345860372 25.153099141229923 26.000131281886674 24.815532231023035 58-59 24.00383721873431 24.84646638219494 26.08494069360966 25.06475570546109 60-61 23.92908152383178 24.918538113744656 26.247164056390137 24.905216306033424 62-63 23.851329394218077 24.952922218161863 26.276730265731054 24.919018121889007 64-65 23.81765983563199 24.902174680312893 26.16045059937977 25.119714884675346 66-67 23.82298146980539 24.946751858997057 26.058320557946494 25.171946113251053 68-69 23.99030633549462 24.769259005150023 26.0792621778332 25.161172481522154 70-71 23.80086190551402 24.71852287785404 26.198293847798503 25.282321368833436 72-73 23.75872587113628 24.80740433965632 26.061028120628272 25.372841668579127 74-75 23.85496297291338 24.923823613290857 26.0362889712768 25.18492444251896 76-77 23.870197303390224 24.72959529754803 26.147472759093226 25.252734639968523 78-79 23.810476586489816 24.810575924791237 26.129120451646422 25.249827037072524 80-81 23.891254857425825 24.875049545831345 26.119120312225785 25.11457528451705 82-83 23.890627684355252 24.741655672075076 26.199447958083216 25.168268685486456 84-85 23.830969708404687 24.778523910062976 26.11602303305617 25.274483348476174 86-87 23.867002240774717 24.780084971865048 26.193698227686973 25.159214559673266 88-89 23.832136869041864 24.58581086928531 26.17387887320574 25.40817338846708 90-91 23.873698967685616 24.71591218838621 26.150674779994393 25.25971406393378 92-93 24.077947042179026 24.56028494000097 26.160628314083894 25.201139703736107 94-95 23.944846117255636 24.52163713690082 26.183604187713822 25.349912558129724 96-97 24.10739375753298 24.37159092627626 26.169992167637186 25.35102314855358 98 24.09869775263947 24.230086559762036 26.154039309027105 25.51717637857139 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 118.0 1 89.5 2 96.0 3 142.5 4 148.5 5 163.5 6 260.0 7 494.5 8 767.5 9 912.5 10 917.5 11 942.0 12 1076.5 13 1260.5 14 1362.5 15 1440.0 16 1579.0 17 1639.5 18 1627.0 19 1684.0 20 1714.5 21 1706.0 22 1743.0 23 1897.0 24 2210.5 25 2738.5 26 3487.0 27 4374.0 28 5568.5 29 7628.0 30 10823.5 31 15638.0 32 21606.5 33 27775.0 34 34695.5 35 42456.0 36 51239.0 37 59470.5 38 65805.0 39 71997.0 40 78329.5 41 83738.5 42 90255.5 43 98479.5 44 105177.0 45 111087.5 46 116688.5 47 121275.5 48 124921.5 49 126574.5 50 126891.0 51 126543.0 52 126626.5 53 126664.0 54 124058.0 55 119655.5 56 112614.0 57 103047.5 58 94103.5 59 83310.5 60 70871.0 61 58827.0 62 47709.5 63 37108.5 64 27495.5 65 20743.5 66 16064.0 67 12553.0 68 9514.5 69 7148.0 70 5358.5 71 4016.0 72 3124.0 73 2486.0 74 2041.5 75 1572.5 76 1122.5 77 743.0 78 434.5 79 275.0 80 178.0 81 120.5 82 80.0 83 44.0 84 28.0 85 19.0 86 12.5 87 9.0 88 7.5 89 5.5 90 5.0 91 4.0 92 2.0 93 3.5 94 5.0 95 3.0 96 1.5 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4093027558037113 2 0.0273639318851822 3 0.020882078621726752 4 0.01842948549501388 5 0.02470111649046537 6 0.0223886715424218 7 0.015100966251617836 8 0.010476076355530703 9 0.0 10-11 0.0 12-13 0.005746075325441589 14-15 0.0036613711677356466 16-17 0.006411779174120798 18-19 0.03745460074937231 20-21 0.08240712905755254 22-23 0.10286876314327137 24-25 0.06749886655160502 26-27 0.07751946132646047 28-29 0.05949290184512084 30-31 0.05632204930272778 32-33 0.021144856456731705 34-35 0.36032096735878844 36-37 0.5512553422733857 38-39 0.5045509617318391 40-41 0.5122591115586509 42-43 0.46061450771901136 44-45 0.4341089834281786 46-47 0.43326809435616276 48-49 0.42133798064693795 50-51 0.41695835006352217 52-53 0.4811637344163984 54-55 0.4834061052751074 56-57 0.4522406540435202 58-59 0.43727983597057174 60-61 0.45253846892319244 62-63 0.430342501126441 64-65 0.4809710306707282 66-67 0.5028341465431401 68-69 0.44421717081470236 70-71 0.39770549401882616 72-73 0.38276219446821125 74-75 0.3641400052275271 76-77 0.36189763436881817 78-79 0.36103922677446865 80-81 0.37822489718379243 82-83 0.3741430814800488 84-85 0.3729167849166924 86-87 0.3587618188710924 88-89 0.4057289772476439 90-91 0.3818687498291944 92-93 0.3705517844016478 94-95 0.378557749108132 96-97 0.3780847490051231 98 0.373249636841032 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2854122.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.342231209647316 #Duplication Level Percentage of deduplicated Percentage of total 1 73.56791288360974 38.50708705765092 2 11.987846813162411 12.549412992007614 3 5.396444438473099 8.47385827525723 4 2.8363237641462917 5.938380569934496 5 1.682465199831136 4.403199124587339 6 1.0652029506971967 3.345305947835473 7 0.744449165319353 2.727629123448217 8 0.527152404843694 2.2073866445640187 9 0.3706919555408019 1.7462559640025663 >10 1.726997097218071 15.173842185464787 >50 0.07000984174212224 2.4531554595598637 >100 0.02362797253796605 2.054083252757771 >500 6.061243002679302E-4 0.22021298494548824 >1k 2.693885777934912E-4 0.20019041798423043 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.5037044667326766E-5 2 0.0 0.0 0.0 0.0 3.5037044667326766E-5 3 0.0 0.0 0.0 0.0 3.5037044667326766E-5 4 0.0 0.0 0.0 0.0 3.5037044667326766E-5 5 0.0 0.0 0.0 0.0 3.5037044667326766E-5 6 0.0 0.0 0.0 0.0 3.5037044667326766E-5 7 0.0 0.0 0.0 0.0 3.5037044667326766E-5 8 3.5037044667326766E-5 0.0 0.0 0.0 3.5037044667326766E-5 9 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.0 3.5037044667326766E-5 10-11 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.7518522333663383E-5 3.5037044667326766E-5 12-13 3.5037044667326766E-5 3.5037044667326766E-5 0.0 3.5037044667326766E-5 1.751852233366338E-4 14-15 3.5037044667326766E-5 3.5037044667326766E-5 0.0 3.5037044667326766E-5 2.2774079033762397E-4 16-17 3.5037044667326766E-5 3.5037044667326766E-5 0.0 5.2555567000990146E-5 2.6277783500495077E-4 18-19 3.5037044667326766E-5 3.5037044667326766E-5 0.0 7.007408933465353E-5 3.854074913405944E-4 20-21 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.4014817866930707E-4 4.379630583415846E-4 22-23 3.5037044667326766E-5 3.5037044667326766E-5 0.0 4.2044453600792117E-4 5.255556700099014E-4 24-25 3.5037044667326766E-5 3.5037044667326766E-5 0.0 9.284816836841593E-4 5.255556700099014E-4 26-27 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.002014630068371289 5.605927146772283E-4 28-29 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.007795742438480205 5.605927146772283E-4 30-31 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.027346413362848543 5.605927146772283E-4 32-33 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.06954853366464363 5.95629759344555E-4 34-35 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.12981225049244566 5.95629759344555E-4 36-37 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.23022842050900416 5.95629759344555E-4 38-39 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.3871768620962944 5.95629759344555E-4 40-41 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.5664789381813391 5.95629759344555E-4 42-43 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.7542249420312096 5.95629759344555E-4 44-45 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.986310325907582 5.95629759344555E-4 46-47 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.2661336831431873 6.657038486792085E-4 48-49 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.5705355272129222 7.357779380138621E-4 50-51 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.8941376717603522 7.357779380138621E-4 52-53 3.5037044667326766E-5 3.5037044667326766E-5 0.0 2.2131499634563623 8.058520273485156E-4 54-55 3.5037044667326766E-5 3.5037044667326766E-5 0.0 2.5745921162445056 8.759261166831692E-4 56-57 3.5037044667326766E-5 3.5037044667326766E-5 0.0 3.0023068390208967 8.934446390168325E-4 58-59 3.5037044667326766E-5 3.5037044667326766E-5 0.0 3.462763680038905 9.109631613504959E-4 60-61 3.5037044667326766E-5 3.5037044667326766E-5 0.0 3.9599743809129393 9.63518728351486E-4 62-63 3.5037044667326766E-5 3.5037044667326766E-5 0.0 4.452630265980221 9.810372506851494E-4 64-65 3.5037044667326766E-5 3.5037044667326766E-5 0.0 4.985280937535256 9.98555773018813E-4 66-67 3.5037044667326766E-5 3.5037044667326766E-5 0.0 5.594312366465063 0.0010335928176861396 68-69 3.5037044667326766E-5 3.5037044667326766E-5 0.0 6.2586848074469135 0.0010511113400198029 70-71 3.5037044667326766E-5 3.5037044667326766E-5 0.0 6.9634199238855246 0.0010861483846871297 72-73 3.5037044667326766E-5 3.5037044667326766E-5 0.0 7.689632748705206 0.0011036669070207932 74-75 3.5037044667326766E-5 3.5037044667326766E-5 0.0 8.431980132594191 0.0011211854293544565 76-77 3.5037044667326766E-5 3.5037044667326766E-5 0.0 9.22909041729821 0.0011211854293544565 78-79 3.5037044667326766E-5 3.5037044667326766E-5 0.0 10.108572794015112 0.0011211854293544565 80-81 3.5037044667326766E-5 3.5037044667326766E-5 0.0 11.026298104986402 0.0011211854293544565 82-83 3.5037044667326766E-5 3.5037044667326766E-5 0.0 11.952852751213857 0.0012613336080237636 84-85 3.5037044667326766E-5 3.5037044667326766E-5 0.0 12.903337698949098 0.0012613336080237636 86 3.5037044667326766E-5 7.007408933465353E-5 0.0 13.622788374147987 0.0012613336080237636 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3030 0.0 44.04847 1 GTATCAA 5095 0.0 39.02249 1 TCAACGC 6505 0.0 30.025522 4 CAACGCA 6690 0.0 29.332285 5 ATCAACG 6695 0.0 29.104933 3 TATCAAC 6790 0.0 28.36159 2 AACGCAG 7115 0.0 27.704205 6 GTACATG 9945 0.0 24.295729 1 ACGCAGA 8220 0.0 23.42066 7 TACATGG 10235 0.0 22.93682 2 CGCAGAG 8865 0.0 21.457714 8 ACATGGG 10750 0.0 21.325035 3 CATGGGG 7380 0.0 19.693874 4 GCAGAGT 9605 0.0 18.468008 9 GTATAGG 710 0.0 17.501724 1 AGAGTAC 8105 0.0 17.390265 10-11 TAAGGCG 640 0.0 17.19331 5 GAGTACA 7610 0.0 16.933582 1 CAGAGTA 8755 0.0 16.43946 10-11 GCACCGT 505 0.0 16.339293 6 >>END_MODULE