##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920854_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2854122 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.257861086526784 31.0 30.0 34.0 27.0 34.0 2 30.273386001018878 31.0 30.0 34.0 26.0 34.0 3 30.40884587274125 31.0 30.0 34.0 27.0 34.0 4 34.04963312710529 35.0 35.0 37.0 30.0 37.0 5 33.57475889257712 35.0 35.0 37.0 28.0 37.0 6 33.52205616998853 35.0 35.0 37.0 28.0 37.0 7 33.33922271017146 35.0 35.0 37.0 27.0 37.0 8 33.270770135264016 35.0 33.0 37.0 27.0 37.0 9 34.60396857597538 38.0 34.0 39.0 27.0 39.0 10-11 34.412237108294605 37.5 34.0 39.0 27.0 39.0 12-13 34.23234728578526 37.0 34.0 39.0 26.5 39.0 14-15 35.1214890253465 38.0 34.0 40.0 26.0 41.0 16-17 34.988653253084486 38.0 34.0 40.0 25.5 41.0 18-19 34.89704399461551 38.0 34.0 40.0 25.0 41.0 20-21 34.7853851377061 38.0 34.0 40.0 25.0 41.0 22-23 34.631215834501816 38.0 34.0 40.0 24.5 41.0 24-25 34.446675019498116 38.0 33.0 40.0 24.0 41.0 26-27 34.25501888146337 38.0 33.0 40.0 23.0 41.0 28-29 34.19329254320593 38.0 33.0 40.0 22.5 41.0 30-31 34.17619288874127 38.0 33.0 40.0 23.0 41.0 32-33 34.01984165358033 38.0 33.0 40.0 22.0 41.0 34-35 33.84670609735674 38.0 33.0 40.0 20.5 41.0 36-37 33.647593725846335 38.0 32.5 40.0 19.0 41.0 38-39 33.45239499222528 38.0 32.0 40.0 18.0 41.0 40-41 33.22460392372856 38.0 32.0 40.0 16.5 41.0 42-43 33.25257504759782 38.0 32.0 40.0 16.0 41.0 44-45 33.10122517537793 38.0 32.0 40.0 15.0 41.0 46-47 32.83768213131744 37.5 31.5 40.0 13.5 41.0 48-49 32.56753022470659 37.0 31.0 40.0 9.0 41.0 50-51 32.29332050276758 37.0 31.0 40.0 8.5 41.0 52-53 32.02433410344757 37.0 31.0 40.0 7.5 41.0 54-55 31.731676851935553 36.0 30.0 39.5 6.5 41.0 56-57 31.389477744819597 36.0 30.0 39.0 2.0 41.0 58-59 31.040685366638144 35.0 29.0 39.0 2.0 40.0 60-61 30.687870210173216 35.0 29.0 39.0 2.0 40.0 62-63 30.34920388827107 35.0 28.5 38.5 2.0 40.0 64-65 29.92955539391799 34.5 28.0 38.0 2.0 40.0 66-67 29.481476615225276 34.0 28.0 37.5 2.0 40.0 68-69 29.027297887055983 34.0 27.0 37.0 2.0 39.0 70-71 28.597254777476223 34.0 26.0 36.0 2.0 39.0 72-73 28.149077895058447 33.5 26.0 36.0 2.0 39.0 74-75 27.713144007158768 33.0 26.0 35.0 2.0 38.0 76-77 26.282106195880907 31.5 24.0 34.0 2.0 36.0 78-79 27.118139483876302 33.0 25.5 35.0 2.0 37.0 80-81 27.150767731722752 33.0 26.0 35.0 2.0 36.0 82-83 26.82694608009048 33.0 25.0 35.0 2.0 36.0 84-85 26.512690767948953 33.0 24.5 35.0 2.0 35.5 86-87 25.982584661762882 32.0 23.0 35.0 2.0 35.0 88-89 25.61815472499073 32.0 21.5 35.0 2.0 35.0 90-91 25.25016011929413 32.0 20.0 34.5 2.0 35.0 92-93 24.93609488311992 32.0 18.5 34.0 2.0 35.0 94-95 24.54524175911191 32.0 15.0 34.0 2.0 35.0 96-97 24.0013639921489 31.0 4.5 34.0 2.0 35.0 98-99 23.388598665368896 31.0 2.0 34.0 2.0 35.0 100-101 21.19840532394901 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 66551.0 3 30065.0 4 16665.0 5 11923.0 6 10302.0 7 10422.0 8 11734.0 9 13683.0 10 15251.0 11 16957.0 12 18621.0 13 20593.0 14 22234.0 15 23468.0 16 24805.0 17 25790.0 18 25159.0 19 24120.0 20 24206.0 21 25325.0 22 27732.0 23 31225.0 24 35637.0 25 42620.0 26 50144.0 27 59342.0 28 70063.0 29 82220.0 30 96663.0 31 114452.0 32 136461.0 33 166350.0 34 209825.0 35 273001.0 36 363435.0 37 418146.0 38 224430.0 39 14501.0 40 1.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.026679192504716 19.409045845690663 14.015071728677992 24.54920323312663 2 16.39032949537546 20.570424109410883 37.57309603443721 25.466150360776453 3 19.182857929791354 24.474314682675537 28.9911768756279 27.351650511905206 4 14.062820855155863 16.73061868408124 35.466457254471564 33.74010320629134 5 14.875738550237536 36.61691957187037 33.71552351832684 14.791818359565253 6 33.682393305568475 34.93310969925144 16.872062084412747 14.512434910767336 7 29.494890875643883 31.053995706111053 20.741574760437977 18.709538657807084 8 27.093127924345357 33.74577901508364 19.98194790078572 19.179145159785282 9 26.83092075924771 15.427960129635872 19.285213307290142 38.455905803826276 10-11 25.96914376932592 25.11542280128442 27.3082499526909 21.607183476698758 12-13 26.63432345399134 22.4019307712369 27.137571309084574 23.826174465687192 14-15 23.94801374598412 23.992421258219863 24.432024060032223 27.627540935763793 16-17 24.004282249839513 26.891084512903724 25.258191897663558 23.84644133959321 18-19 24.055751887654676 26.07988644705406 26.64042788534112 23.223933779950144 20-21 24.880102038133913 25.273838427704238 26.228553222497602 23.61750631166425 22-23 24.576843246586886 25.179531938783633 26.08715929784155 24.156465516787932 24-25 24.287567593718826 25.496590010932792 26.097691843984872 24.118150551363513 26-27 24.087812478416065 25.641575366983883 26.099391460106574 24.17122069449348 28-29 24.13330973227993 25.588560031966573 26.140982411373372 24.137147824380122 30-31 24.467694196928836 25.537553906963645 25.812382826662052 24.18236906944547 32-33 24.286857613706996 25.538154622556185 25.69715156616283 24.47783619757399 34-35 24.55744071524393 25.49682567050614 25.825910911310817 24.11982270293911 36-37 24.558008726278715 25.352380451733865 25.77691916802467 24.312691653962748 38-39 24.431875433610138 25.352570275290194 25.842068914637135 24.373485376462533 40-41 24.541211297848662 25.192221729050203 25.97630099139258 24.290265981708554 42-43 24.45804062559954 25.152041573477636 25.821898787294227 24.568019013628593 44-45 24.255321982504306 25.219107986263772 25.954266426549605 24.571303604682317 46-47 24.43821041869731 25.178442561385467 25.735404160791596 24.64794285912562 48-49 24.27314114418216 25.143502381413324 25.798384475830648 24.78497199857387 50-51 24.162521735047235 25.298263368849973 25.84891960783352 24.690295288269276 52-53 24.3136737554955 25.05428485031327 25.97881795855325 24.653223435637983 54-55 24.08258070213185 25.13480432523199 26.00511044002907 24.77750453260709 56-57 24.08339961527276 25.221375837867953 25.770961152359696 24.92426339449959 58-59 23.891132617345207 25.03965918764319 26.0023065836091 25.066901611402503 60-61 23.906245044356133 25.22709005293088 25.937408498553587 24.929256404159403 62-63 23.70551569391234 25.277438613624252 25.984033033508137 25.033012658955272 64-65 23.65459603586027 25.16956996373923 25.903089813082786 25.27274418731772 66-67 23.65593093886487 25.202890831789755 25.77526318805742 25.365915041287955 68-69 23.81892884045387 25.011888212924553 25.78460451878338 25.384578427838196 70-71 23.621918102020796 24.880382775119617 25.89204328613828 25.605655836721304 72-73 23.507852127653795 24.94775793331909 25.783508314826825 25.760881624200287 74-75 23.508709793367053 25.067670754907205 25.681888714527428 25.741730737198314 76-77 23.565659074390304 24.8146662305941 25.912546840622618 25.70712785439298 78-79 23.43667324360782 24.877651011629858 25.86310518348754 25.822570561274777 80-81 23.41122034075303 25.025537729081755 25.832056884919197 25.731185045246026 82-83 23.343365076673017 24.88301020280334 25.91858606908149 25.855038651442154 84-85 23.212764518490406 24.873945368909318 25.77021315663784 26.143076955962442 86-87 23.20289022306441 24.909728837813354 25.852694678731282 26.034686260390956 88-89 23.137202359177866 24.72022445862051 25.79021087510126 26.352362307100364 90-91 22.933168497270913 24.88253410502748 25.803711938090217 26.38058545961139 92-93 22.980590959418613 24.719918905434326 25.878375028611995 26.421115106535066 94-95 22.775050397124257 24.680899967292454 25.882705171523657 26.661344464059628 96-97 22.846507759036616 24.579269922814326 25.875193191935463 26.699029126213592 98-99 22.634920290101356 24.509177701620548 25.876871953657222 26.97903005462088 100-101 22.78392950214393 24.42720929926988 25.917352476140838 26.871508722445352 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 116.0 1 80.5 2 76.5 3 112.5 4 96.0 5 99.0 6 151.5 7 339.0 8 541.0 9 583.0 10 485.5 11 386.0 12 416.5 13 457.5 14 491.5 15 537.5 16 580.5 17 618.0 18 684.0 19 777.0 20 844.5 21 964.5 22 1167.0 23 1366.0 24 1680.0 25 2117.5 26 2754.5 27 3591.0 28 4440.0 29 5941.0 30 8577.5 31 12329.5 32 17271.5 33 22789.5 34 28908.0 35 35491.5 36 43894.5 37 52791.0 38 59516.5 39 65615.0 40 71763.5 41 77810.0 42 83915.5 43 90950.0 44 98423.0 45 105605.5 46 111408.0 47 115906.5 48 120691.5 49 124493.0 50 125811.0 51 126236.0 52 126419.0 53 125837.0 54 123667.0 55 119393.0 56 112283.0 57 102592.5 58 93872.5 59 83850.5 60 71479.0 61 59550.0 62 48707.0 63 37706.5 64 27718.5 65 20913.0 66 16097.5 67 12576.5 68 9588.5 69 7105.0 70 5474.5 71 4119.0 72 3099.5 73 2622.5 74 2097.5 75 1593.0 76 1132.5 77 728.5 78 486.5 79 309.0 80 189.5 81 121.5 82 69.5 83 36.5 84 23.0 85 13.5 86 6.0 87 5.0 88 2.0 89 0.5 90 0.5 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19655782058370314 2 0.0 3 0.012998743571578231 4 0.01471555876027724 5 0.007708149826811888 6 0.10637246761000406 7 0.14102410478599023 8 0.12206906362096645 9 0.13962262299929715 10-11 0.11178569101110605 12-13 0.11353754324447238 14-15 0.11397550630281397 16-17 0.0659747551085763 18-19 0.07836035039847632 20-21 0.037524674838706966 22-23 0.08412394424625157 24-25 0.05933523514411788 26-27 0.06604482919791095 28-29 0.040012305010087165 30-31 0.024893820236135667 32-33 0.03232167370560894 34-35 0.02123244906840002 36-37 0.023544894016443586 38-39 0.031410710544258445 40-41 0.02492885728080299 42-43 0.013296558451250507 44-45 0.027731820854189137 46-47 0.03374067401463567 48-49 0.008741742644498028 50-51 0.01527615147495447 52-53 0.006832223710128719 54-55 0.012473187901568329 56-57 0.005325630789433668 58-59 0.004116852748410895 60-61 0.023947820030117844 62-63 0.010248335565193079 64-65 0.007410334947139611 66-67 0.041045897827773306 68-69 0.08962476025902187 70-71 0.022598893810425763 72-73 0.04542552841118915 74-75 0.0857356483009486 76-77 0.26281287204961806 78-79 0.07844794301014463 80-81 0.01755355937833071 82-83 0.01217537302189605 84-85 0.01397978082226338 86-87 0.2745678005355062 88-89 0.6294229889261916 90-91 0.2682961695400547 92-93 0.3515967432366241 94-95 0.001419000309026734 96-97 0.0033285192433960427 98-99 0.002978148796722775 100-101 0.00471248250775545 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2854122.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.24102608750105 #Duplication Level Percentage of deduplicated Percentage of total 1 70.82320841930282 34.87407453375414 2 13.11476140201929 12.915686166563676 3 5.8301617412740026 8.61249439189271 4 3.111143047908732 6.127835039360856 5 1.9173678999759545 4.720658139102654 6 1.248796096547245 3.689520070083143 7 0.8536891605182809 2.942557115658828 8 0.5767550955931678 2.272001016656187 9 0.4283841050918138 1.8984665604867117 >10 1.983743527891256 16.31948668806024 >50 0.08194084591907398 2.6922180644719114 >100 0.02897605632492727 2.3448713846084193 >500 5.720542045117632E-4 0.206158472898784 >1k 5.005474288761076E-4 0.3839723564017208 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.5037044667326766E-5 0.0 0.0 0.0 0.0 6 3.5037044667326766E-5 0.0 0.0 0.0 0.0 7 3.5037044667326766E-5 0.0 0.0 0.0 0.0 8 3.5037044667326766E-5 0.0 0.0 0.0 0.0 9 3.5037044667326766E-5 0.0 0.0 0.0 0.0 10-11 3.5037044667326766E-5 0.0 0.0 1.7518522333663383E-5 0.0 12-13 3.5037044667326766E-5 0.0 0.0 3.5037044667326766E-5 1.5766670100297045E-4 14-15 3.5037044667326766E-5 0.0 0.0 3.5037044667326766E-5 1.927037456702972E-4 16-17 3.5037044667326766E-5 0.0 0.0 7.007408933465353E-5 2.1022226800396058E-4 18-19 3.5037044667326766E-5 0.0 0.0 1.0511113400198029E-4 2.4525931267128736E-4 20-21 3.5037044667326766E-5 0.0 0.0 1.751852233366338E-4 2.8029635733861413E-4 22-23 3.5037044667326766E-5 0.0 0.0 5.08037147676238E-4 3.854074913405944E-4 24-25 3.5037044667326766E-5 0.0 0.0 9.985557730188127E-4 3.854074913405944E-4 26-27 3.5037044667326766E-5 0.0 0.0 0.0021197412023732693 4.0292601367425776E-4 28-29 3.5037044667326766E-5 0.0 0.0 0.007830779483147532 4.2044453600792117E-4 30-31 3.5037044667326766E-5 0.0 0.0 0.027258820751180225 4.5548158067524794E-4 32-33 3.5037044667326766E-5 0.0 0.0 0.06961860775397828 4.905186253425747E-4 34-35 3.5037044667326766E-5 0.0 0.0 0.1295144356127734 5.255556700099014E-4 36-37 3.5037044667326766E-5 0.0 0.0 0.22984301301766358 5.255556700099014E-4 38-39 3.5037044667326766E-5 0.0 0.0 0.38644108415828055 5.95629759344555E-4 40-41 3.5037044667326766E-5 0.0 0.0 0.565655567631657 6.131482816782184E-4 42-43 3.5037044667326766E-5 0.0 0.0 0.7538044974952016 6.481853263455451E-4 44-45 3.5037044667326766E-5 3.5037044667326766E-5 0.0 0.9859774739832425 6.832223710128719E-4 46-47 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.2653453496381726 7.007408933465352E-4 48-49 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.5667340078665173 7.007408933465352E-4 50-51 3.5037044667326766E-5 3.5037044667326766E-5 0.0 1.8853258550265195 7.007408933465352E-4 52-53 3.5037044667326766E-5 5.2555567000990146E-5 0.0 2.1987847751427587 7.708149826811888E-4 54-55 3.5037044667326766E-5 7.007408933465353E-5 0.0 2.5545334081724604 8.058520273485156E-4 56-57 3.5037044667326766E-5 7.007408933465353E-5 0.0 2.975713722118396 8.23370549682179E-4 58-59 3.5037044667326766E-5 7.007408933465353E-5 0.0 3.4304069692886285 8.408890720158423E-4 60-61 3.5037044667326766E-5 7.007408933465353E-5 0.0 3.9230453358335766 8.759261166831692E-4 62-63 3.5037044667326766E-5 7.007408933465353E-5 0.0 4.409937627053083 9.109631613504959E-4 64-65 3.5037044667326766E-5 7.007408933465353E-5 0.0 4.935703519330989 9.109631613504959E-4 66-67 3.5037044667326766E-5 7.007408933465353E-5 0.0 5.536361094585304 9.109631613504959E-4 68-69 3.5037044667326766E-5 7.007408933465353E-5 0.0 6.190327533300959 9.109631613504959E-4 70-71 3.5037044667326766E-5 7.007408933465353E-5 0.0 6.885007017920047 9.109631613504959E-4 72-73 3.5037044667326766E-5 7.007408933465353E-5 0.0 7.60275839645257 9.460002060178226E-4 74-75 3.5037044667326766E-5 7.007408933465353E-5 0.0 8.341812298142827 9.810372506851494E-4 76-77 3.5037044667326766E-5 7.007408933465353E-5 0.0 9.133141470476735 9.810372506851494E-4 78-79 3.5037044667326766E-5 7.007408933465353E-5 0.0 10.005984327229179 9.98555773018813E-4 80-81 3.5037044667326766E-5 7.007408933465353E-5 0.0 10.916351858820331 0.0010160742953524763 82-83 3.5037044667326766E-5 7.007408933465353E-5 0.0 11.836302022127995 0.0010511113400198029 84-85 3.5037044667326766E-5 7.007408933465353E-5 0.0 12.780042338764776 0.0010511113400198029 86-87 3.5037044667326766E-5 7.007408933465353E-5 0.0 13.750480883438058 0.0010861483846871297 88-89 3.5037044667326766E-5 7.007408933465353E-5 0.0 14.7878226649036 0.0011211854293544565 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3265 0.0 44.715458 1 GTATCAA 5365 0.0 40.508762 1 TCAACGC 6995 0.0 30.335018 4 ATCAACG 7090 0.0 29.928556 3 TATCAAC 7270 0.0 29.315563 2 CAACGCA 7200 0.0 29.269924 5 AACGCAG 7635 0.0 27.72662 6 GTACATG 10095 0.0 24.119379 1 ACGCAGA 8745 0.0 23.826935 7 TACATGG 10550 0.0 22.81087 2 CGCAGAG 9340 0.0 21.850542 8 ACATGGG 11125 0.0 20.993725 3 GCAGAGT 10135 0.0 19.386953 9 CATGGGG 7315 0.0 19.07908 4 AGTATCG 300 3.758032E-9 18.985895 5 AGAGTAC 8835 0.0 17.994858 10-11 TAATACT 1615 0.0 17.636126 4 GAGTACA 7945 0.0 17.298422 1 GTATTAT 835 0.0 17.085878 1 CAGAGTA 9475 0.0 16.879549 10-11 >>END_MODULE