##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920853_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3312010 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.717910272010048 31.0 30.0 33.0 23.0 34.0 2 28.738638470294475 31.0 28.0 34.0 22.0 34.0 3 28.814345971177623 31.0 28.0 34.0 22.0 34.0 4 32.30808693210467 35.0 32.0 37.0 24.0 37.0 5 32.278027542187374 35.0 32.0 37.0 24.0 37.0 6 32.41040214250561 35.0 33.0 37.0 25.0 37.0 7 32.24961367870266 35.0 32.0 37.0 23.0 37.0 8 32.191378347287596 35.0 32.0 37.0 23.0 37.0 9 33.467359700000905 37.0 33.0 39.0 23.0 39.0 10-11 33.27410047071114 37.0 33.0 39.0 22.0 39.0 12-13 33.0982869918871 37.0 32.0 39.0 19.0 39.0 14-15 33.86664548114287 38.0 33.0 40.0 18.0 41.0 16-17 33.75427746293036 38.0 32.5 40.0 18.0 41.0 18-19 33.644386792310414 38.0 32.0 40.0 17.5 41.0 20-21 33.55578334606477 38.0 32.0 40.0 18.0 41.0 22-23 33.33177405865321 38.0 32.0 40.0 17.5 41.0 24-25 33.14008955286971 38.0 32.0 40.0 16.0 41.0 26-27 33.18389059815641 38.0 32.0 40.0 16.0 41.0 28-29 33.02657766733796 38.0 32.0 40.0 13.5 41.0 30-31 32.78253598268121 38.0 31.5 40.0 10.0 41.0 32-33 32.544863693044405 37.5 31.0 40.0 9.0 41.0 34-35 32.21749330466997 37.0 30.5 40.0 8.5 41.0 36-37 31.912634774653455 37.0 30.0 40.0 8.0 41.0 38-39 31.718840371858782 37.0 30.0 40.0 4.5 41.0 40-41 31.523497664560193 37.0 30.0 40.0 2.0 41.0 42-43 31.28691172430035 36.5 30.0 40.0 2.0 41.0 44-45 31.009512501471917 36.0 29.5 39.5 2.0 41.0 46-47 30.758173586432406 36.0 29.0 39.0 2.0 40.0 48-49 30.459779710810054 36.0 28.0 39.0 2.0 40.0 50-51 29.32266388084577 34.0 26.5 38.0 2.0 39.5 52-53 29.779696468307765 34.5 27.5 38.5 2.0 39.5 54-55 30.43610602021129 36.0 28.0 39.0 2.0 40.0 56-57 30.394505904269614 36.0 28.0 39.0 2.0 41.0 58-59 30.153177979535087 35.0 28.0 39.0 2.0 41.0 60-61 29.837203993949295 35.0 28.0 39.0 2.0 40.0 62-63 29.450835595303154 35.0 27.5 39.0 2.0 40.0 64-65 29.033073873569222 34.0 26.5 38.0 2.0 40.0 66-67 28.647500762376925 34.0 26.0 38.0 2.0 40.0 68-69 28.209154108834213 34.0 26.0 37.0 2.0 40.0 70-71 27.880316635517403 34.0 26.0 36.5 2.0 39.0 72-73 27.413738485089116 33.5 25.0 36.0 2.0 39.0 74-75 26.964312607751786 33.0 24.0 35.5 2.0 38.5 76-77 26.539011657573496 33.0 22.5 35.0 2.0 37.5 78-79 26.063100956820783 32.0 21.5 35.0 2.0 37.0 80-81 25.59565747084097 32.0 20.0 35.0 2.0 36.5 82-83 25.107129205527762 32.0 18.0 35.0 2.0 36.0 84-85 24.688817213716142 32.0 14.5 35.0 2.0 35.5 86-87 24.20787150401116 31.0 7.0 34.0 2.0 35.0 88-89 23.642890269051122 31.0 2.0 34.0 2.0 35.0 90-91 23.124562727769543 31.0 2.0 34.0 2.0 35.0 92-93 22.559080588524793 30.0 2.0 34.0 2.0 35.0 94-95 21.8988694176648 30.0 2.0 34.0 2.0 35.0 96-97 21.23604548295446 29.0 2.0 34.0 2.0 35.0 98 20.82857358522468 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 156572.0 3 27832.0 4 20844.0 5 16905.0 6 15539.0 7 15835.0 8 18223.0 9 21178.0 10 23299.0 11 24813.0 12 25805.0 13 25537.0 14 24221.0 15 25725.0 16 27505.0 17 29443.0 18 30553.0 19 30135.0 20 31515.0 21 33369.0 22 36561.0 23 41227.0 24 46808.0 25 53803.0 26 62092.0 27 72158.0 28 83323.0 29 96704.0 30 113277.0 31 132104.0 32 156565.0 33 189197.0 34 235479.0 35 297246.0 36 378063.0 37 415009.0 38 250348.0 39 27195.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.53720551081373 17.8884995746781 12.483000765761314 25.09129414874686 2 16.18753977120177 19.69256993162751 38.94815873870135 25.171731558469368 3 19.558517095798074 23.410945417867087 28.732265487687762 28.298271998647074 4 13.405423557244264 15.278042015989582 36.12269229445136 35.19384213231479 5 14.572086852553786 36.64152891033247 33.95532946909917 14.831054768014578 6 33.94513200572599 34.51664341239785 17.13501368075815 14.403210901118015 7 29.89636645411291 31.21608008030256 20.600632467214016 18.286920998370515 8 26.84809828059092 34.33503610423893 19.974961205268293 18.841904409901858 9 27.063475049894176 15.813478824037366 19.311294349956672 37.811751776111784 10-11 25.87494087803794 25.20078822237678 27.430507068291927 21.493763831293357 12-13 26.51791777519511 22.37986450362836 27.396723798343086 23.705493922833437 14-15 23.423721285471245 24.072006607706385 24.81787969741149 27.68639240941088 16-17 23.74848514997827 27.219697828655836 25.523624413516956 23.508192607848944 18-19 23.685971528923766 26.25658703800498 27.03305446009659 23.02438697297466 20-21 24.32073209075046 25.73593368902612 26.763321066449823 23.180013153773597 22-23 24.034545550711385 25.46774766333955 26.618782443123003 23.878924342826053 24-25 23.92019948165708 25.69086204573237 26.688345864888824 23.700592607721727 26-27 23.581929313421725 26.0022886144002 26.55650859091577 23.85927348126231 28-29 23.63391184999956 26.071029242448002 26.652597252521666 23.642461655030775 30-31 23.757762122248167 25.847136395994774 26.496427509243702 23.898673972513354 32-33 23.67232581087682 25.90481252496182 26.385755475744855 24.03710618841651 34-35 24.05907252392231 25.938374611710845 26.20791769747088 23.79463516689597 36-37 24.13919613527567 25.569600116818474 26.35288803170735 23.9383157161985 38-39 23.824063505751877 25.723595165700193 26.491685594822513 23.960655733725414 40-41 24.059575505029084 25.522227925665202 26.552959603894116 23.865236965411594 42-43 24.00983616253174 25.437186790788946 26.357321427623603 24.195655619055707 44-45 23.792779471523914 25.690750508692382 26.43810114658755 24.07836887319615 46-47 23.833146702300915 25.67316797611608 26.29462960486678 24.199055716716227 48-49 23.811147298037234 25.680788865557048 26.282976776563483 24.225087059842235 50-51 23.696659905833418 25.77488850688665 26.350802356286817 24.177649230993115 52-53 23.86010673532579 25.586656734271575 26.414149021420936 24.139087508981703 54-55 23.42308643267456 25.424745886632294 26.694652887434717 24.45751479325843 56-57 23.39063522379278 25.71838646893938 26.643445665054994 24.24753264221284 58-59 23.452299115989366 25.355940652754207 26.64822210854412 24.54353812271231 60-61 23.316896812331912 25.384325873160485 26.91921832560385 24.379558988903757 62-63 23.251765373661282 25.43564682763361 26.887742277428295 24.42484552127681 64-65 23.134178145265523 25.3450860513807 26.739370063332835 24.78136574002094 66-67 23.11306112503713 25.475658524166693 26.63622496615931 24.77505538463686 68-69 23.196593622169477 25.20637109831182 26.791564356759913 24.805470922758786 70-71 23.06856875509518 25.210744646492632 26.792505961139717 24.928180637272472 72-73 23.17851812003243 25.21903910411347 26.76224608087528 24.84019669497882 74-75 23.095252200027968 25.386208446125657 26.65970431151393 24.85883504233244 76-77 23.19429039193635 25.275639307597757 26.669043296426885 24.86102700403901 78-79 23.18004336685841 25.273891163487484 26.664133499140664 24.881931970513445 80-81 23.150389965011495 25.384956912162025 26.63392081899471 24.830732303831766 82-83 23.261413524556506 25.38915820852825 26.55015532387703 24.799272943038215 84-85 23.22481900936883 25.211666495698033 26.603937086976266 24.959577407956875 86-87 23.37816396366342 25.17257088386078 26.61698043259869 24.832284719877116 88-89 23.294594216900048 25.075246626141052 26.580906682058032 25.049252474900868 90-91 23.29752650583623 25.171115256727056 26.62638101820416 24.904977219232553 92-93 23.49169397562467 24.971696060540125 26.60006654759213 24.93654341624307 94-95 23.449610376818843 24.851541634939935 26.699412439908627 24.999435548332592 96-97 23.749110330800107 24.69609566862741 26.538212854786135 25.016581145786343 98 23.718226900749258 24.67576862140903 26.443843331300886 25.162161146540825 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 52.0 2 101.0 3 166.0 4 173.0 5 203.5 6 322.0 7 580.5 8 905.0 9 1033.5 10 1061.0 11 1155.0 12 1310.5 13 1493.5 14 1647.0 15 1829.0 16 2024.5 17 2073.5 18 2104.5 19 2178.0 20 2234.0 21 2385.0 22 2551.0 23 2852.5 24 3347.5 25 4121.5 26 5221.0 27 6781.5 28 9351.5 29 13289.0 30 19017.5 31 26791.0 32 34706.5 33 42063.0 34 49775.0 35 58454.0 36 67520.0 37 75289.5 38 80914.5 39 86507.0 40 93579.0 41 101191.5 42 109220.0 43 116066.5 44 122967.5 45 130002.0 46 136051.5 47 142995.5 48 148448.0 49 150307.5 50 150563.0 51 150138.0 52 148742.0 53 145957.5 54 139761.0 55 131343.5 56 119800.5 57 107493.0 58 96964.0 59 83165.0 60 68949.0 61 57352.0 62 47485.5 63 36931.5 64 26977.0 65 20619.0 66 16105.0 67 12364.0 68 9183.0 69 6973.0 70 5297.5 71 4150.0 72 3384.0 73 2620.5 74 2107.0 75 1508.0 76 923.5 77 551.0 78 304.0 79 150.5 80 80.0 81 47.5 82 33.5 83 23.5 84 17.0 85 13.5 86 10.0 87 9.0 88 7.5 89 4.5 90 5.0 91 5.0 92 3.0 93 3.0 94 2.0 95 0.5 96 2.0 97 1.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.402535016500554 2 0.02666054752250144 3 0.020229407519904832 4 0.018236659913466447 5 0.023822391840604345 6 0.023852584986156444 7 0.01612313972481967 8 0.010537407797681772 9 0.0 10-11 1.5096572776048383E-5 12-13 0.005646118218242094 14-15 0.0036080808934755636 16-17 0.0064462365753726585 18-19 0.037635755930688616 20-21 0.08132523754457263 22-23 0.1006941404162427 24-25 0.06739110087227998 26-27 0.07801908810661803 28-29 0.06017493908532885 30-31 0.05387966823771667 32-33 0.021210684750347975 34-35 0.35614324835975736 36-37 0.5437936479660388 38-39 0.4962092505759343 40-41 0.5051162285138028 42-43 0.4526707346898107 44-45 0.4255270968384757 46-47 0.4244854333169284 48-49 0.41376686664593404 50-51 0.41062677950851595 52-53 0.47480231037949766 54-55 0.4753910767177636 56-57 0.44406568820746317 58-59 0.428712473694222 60-61 0.44317499041367625 62-63 0.42219075425496905 64-65 0.4738663228673826 66-67 0.4958016431109809 68-69 0.43571728346230837 70-71 0.39053324114359556 72-73 0.37696142221792805 74-75 0.3587398588772377 76-77 0.3568376907074556 78-79 0.35609795864142924 80-81 0.3730363132961555 82-83 0.36627304869248584 84-85 0.367888381979523 86-87 0.3532447063867561 88-89 0.3982777829777084 90-91 0.3745912602920885 92-93 0.3658201515092044 94-95 0.37280986470451477 96-97 0.37223619493902493 98 0.3685375346088931 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3312010.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.478724954671115 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74112890074564 47.42900673462425 2 11.11479657075518 13.22187856318138 3 3.7553939677341877 6.700981347098785 4 1.7326685796856114 4.1222767155488445 5 0.9725411327069922 2.892275326969174 6 0.5683525293690082 2.028293026297852 7 0.3916069175374592 1.6304596096989972 8 0.28276268656066844 1.3454691249108701 9 0.20100634199468778 1.0760040836681932 >10 1.1278750992654285 12.091830060349357 >50 0.0751345814961703 3.0364235898945013 >100 0.03499307893457128 3.5033973602873325 >500 0.0011767971766834745 0.46865812646045646 >1k 5.628160378006584E-4 0.4530463310100393 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.0386291104193526E-5 2 0.0 0.0 0.0 0.0 6.0386291104193526E-5 3 0.0 0.0 0.0 3.0193145552096763E-5 6.0386291104193526E-5 4 0.0 0.0 0.0 9.057943665629028E-5 6.0386291104193526E-5 5 0.0 0.0 0.0 9.057943665629028E-5 9.057943665629028E-5 6 0.0 0.0 0.0 9.057943665629028E-5 9.057943665629028E-5 7 0.0 0.0 0.0 9.057943665629028E-5 9.057943665629028E-5 8 0.0 0.0 0.0 9.057943665629028E-5 9.057943665629028E-5 9 0.0 0.0 0.0 1.5096572776048382E-4 9.057943665629028E-5 10-11 0.0 0.0 0.0 1.5096572776048382E-4 9.057943665629028E-5 12-13 0.0 0.0 0.0 1.660623005365322E-4 2.1135201886467734E-4 14-15 0.0 1.5096572776048382E-5 0.0 1.9625544608862895E-4 3.019314555209676E-4 16-17 0.0 3.0193145552096763E-5 0.0 2.1135201886467734E-4 3.6231774662516113E-4 18-19 0.0 3.0193145552096763E-5 0.0 2.2644859164072572E-4 3.925108921772579E-4 20-21 0.0 3.0193145552096763E-5 0.0 3.6231774662516113E-4 4.378006105054031E-4 22-23 0.0 3.0193145552096763E-5 0.0 5.132834743856449E-4 4.5289718328145144E-4 24-25 0.0 3.0193145552096763E-5 0.0 7.699252115784675E-4 4.5289718328145144E-4 26-27 0.0 3.0193145552096763E-5 0.0 0.001736105869245564 5.132834743856449E-4 28-29 0.0 3.0193145552096763E-5 0.0 0.007216161786951126 5.434766199377418E-4 30-31 3.0193145552096763E-5 3.0193145552096763E-5 0.0 0.03248782461405612 5.434766199377418E-4 32-33 3.0193145552096763E-5 3.0193145552096763E-5 0.0 0.08876784792316447 5.736697654898385E-4 34-35 3.0193145552096763E-5 6.0386291104193526E-5 0.0 0.16533766504328187 6.038629110419353E-4 36-37 3.0193145552096763E-5 6.0386291104193526E-5 0.0 0.28546109462229885 6.038629110419353E-4 38-39 3.0193145552096763E-5 7.54828638802419E-5 0.0 0.48974791742778556 6.189594838179836E-4 40-41 3.0193145552096763E-5 9.057943665629028E-5 0.0 0.7225219730616755 6.34056056594032E-4 42-43 3.0193145552096763E-5 1.2077258220838705E-4 0.0 0.9695320968233792 6.34056056594032E-4 44-45 3.0193145552096763E-5 1.2077258220838705E-4 0.0 1.2658023375533287 6.793457749221771E-4 46-47 3.0193145552096763E-5 1.2077258220838705E-4 0.0 1.6156503150654737 7.397320660263707E-4 48-49 3.0193145552096763E-5 1.2077258220838705E-4 0.0 1.9891697186904629 7.699252115784675E-4 50-51 3.0193145552096763E-5 1.2077258220838705E-4 0.0 2.4064389902204404 8.454080754587093E-4 52-53 3.0193145552096763E-5 1.2077258220838705E-4 0.0 2.8333851648998643 8.454080754587093E-4 54-55 3.0193145552096763E-5 1.2077258220838705E-4 0.0 3.3095159736836544 8.454080754587093E-4 56-57 3.0193145552096763E-5 1.2077258220838705E-4 0.0 3.859016126159039 8.454080754587093E-4 58-59 3.0193145552096763E-5 1.2077258220838705E-4 0.0 4.433168981977712 8.756012210108062E-4 60-61 3.0193145552096763E-5 1.2077258220838705E-4 0.0 5.040171980157065 8.756012210108062E-4 62-63 3.0193145552096763E-5 1.2077258220838705E-4 0.0 5.663418890643446 9.057943665629029E-4 64-65 3.0193145552096763E-5 1.2077258220838705E-4 0.0 6.326898167577996 9.057943665629029E-4 66-67 3.0193145552096763E-5 1.5096572776048382E-4 0.0 7.075914625861637 9.057943665629029E-4 68-69 3.0193145552096763E-5 1.5096572776048382E-4 0.0 7.895779300183272 9.057943665629029E-4 70-71 3.0193145552096763E-5 1.5096572776048382E-4 0.0 8.753928883064967 9.057943665629029E-4 72-73 3.0193145552096763E-5 1.5096572776048382E-4 0.0 9.624170820740275 9.208909393389512E-4 74-75 3.0193145552096763E-5 1.5096572776048382E-4 0.0 10.512407873164634 9.359875121149996E-4 76-77 3.0193145552096763E-5 1.5096572776048382E-4 0.0 11.47377272411617 9.359875121149996E-4 78-79 3.0193145552096763E-5 1.5096572776048382E-4 0.0 12.496173018801272 9.359875121149996E-4 80-81 3.0193145552096763E-5 1.5096572776048382E-4 0.0 13.565659523974867 9.51084084891048E-4 82-83 3.0193145552096763E-5 1.5096572776048382E-4 0.0 14.642618832672607 9.963738032191932E-4 84-85 3.0193145552096763E-5 1.5096572776048382E-4 0.0 15.722763518226092 9.963738032191932E-4 86 3.0193145552096763E-5 1.5096572776048382E-4 0.0 16.554056298139198 9.963738032191932E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2530 0.0 48.74986 1 GTATCAA 4875 0.0 44.086063 1 TCAACGC 6230 0.0 34.00239 4 ATCAACG 6375 0.0 33.44478 3 CAACGCA 6500 0.0 32.30782 5 TATCAAC 6800 0.0 31.085701 2 AACGCAG 6960 0.0 30.69493 6 GTACATG 9950 0.0 30.526707 1 TACATGG 10385 0.0 28.258047 2 ACATGGG 10455 0.0 27.848719 3 ACGCAGA 8390 0.0 24.80455 7 CATGGGG 7170 0.0 24.172869 4 CGCAGAG 8580 0.0 24.040476 8 GCAGAGT 9495 0.0 20.999336 9 GAGTACA 7275 0.0 19.357422 1 GTATATA 1110 0.0 18.242685 1 AGTACAT 7515 0.0 17.755491 2 AGAGTAC 8380 0.0 17.722916 10-11 ATGGGGA 3730 0.0 17.209757 5 TAAGGCG 1070 0.0 17.140825 5 >>END_MODULE