##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920852_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3382621 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.663876029859686 31.0 30.0 33.0 22.0 34.0 2 28.698308501011493 31.0 28.0 34.0 20.0 34.0 3 28.77443999785965 31.0 28.0 34.0 22.0 34.0 4 32.26203556354673 35.0 32.0 37.0 23.0 37.0 5 32.230836679604366 35.0 32.0 37.0 23.0 37.0 6 32.34902284352873 35.0 33.0 37.0 24.0 37.0 7 32.19194730949758 35.0 32.0 37.0 23.0 37.0 8 32.133540234037454 35.0 32.0 37.0 22.0 37.0 9 33.403724212674135 37.0 33.0 39.0 22.0 39.0 10-11 33.213597089357634 37.0 33.0 39.0 20.0 39.0 12-13 33.04650949662998 37.0 32.0 39.0 18.5 39.0 14-15 33.81435032183623 38.0 33.0 40.0 18.0 41.0 16-17 33.69947505203805 38.0 32.5 40.0 17.5 41.0 18-19 33.58787061867115 38.0 32.0 40.0 17.5 41.0 20-21 33.49733209839353 38.0 32.0 40.0 18.0 41.0 22-23 33.2728415332371 38.0 32.0 40.0 16.5 41.0 24-25 33.08341076342872 38.0 32.0 40.0 15.5 41.0 26-27 33.122150693205064 38.0 32.0 40.0 14.0 41.0 28-29 32.97011769867213 38.0 32.0 40.0 10.5 41.0 30-31 32.72450579003678 38.0 31.5 40.0 9.5 41.0 32-33 32.48610160582578 37.5 31.0 40.0 9.0 41.0 34-35 32.162376748680984 37.0 30.5 40.0 8.0 41.0 36-37 31.864559316577292 37.0 30.0 40.0 7.0 41.0 38-39 31.665311307415166 37.0 30.0 40.0 2.0 41.0 40-41 31.470667272508507 37.0 30.0 40.0 2.0 41.0 42-43 31.24865392841823 37.0 30.0 40.0 2.0 41.0 44-45 30.97385474163378 36.0 29.5 39.5 2.0 41.0 46-47 30.74001639557018 36.0 29.0 39.0 2.0 40.0 48-49 30.438304793827037 36.0 28.0 39.0 2.0 40.0 50-51 29.315069290943324 34.0 26.5 38.0 2.0 39.5 52-53 29.771469372418608 35.0 27.5 38.5 2.0 39.5 54-55 30.42841438635898 36.0 28.0 39.0 2.0 40.0 56-57 30.385060578764218 36.0 28.0 39.0 2.0 41.0 58-59 30.153460290112314 35.0 28.0 39.0 2.0 41.0 60-61 29.835032508814912 35.0 28.0 39.0 2.0 40.0 62-63 29.447850793807525 35.0 27.5 39.0 2.0 40.0 64-65 29.03149199984273 34.0 26.0 38.0 2.0 40.0 66-67 28.65222397070201 34.0 26.0 38.0 2.0 40.0 68-69 28.214814636342645 34.0 26.0 37.0 2.0 40.0 70-71 27.891940894353816 34.0 26.0 37.0 2.0 39.0 72-73 27.428034946865168 33.5 25.0 36.0 2.0 39.0 74-75 26.982998538707115 33.0 24.0 36.0 2.0 39.0 76-77 26.552639210836805 33.0 22.5 35.0 2.0 37.5 78-79 26.084516414933866 32.5 21.5 35.0 2.0 37.0 80-81 25.625383984785763 32.0 20.0 35.0 2.0 36.5 82-83 25.14235543976106 32.0 18.0 35.0 2.0 36.0 84-85 24.72463616231319 32.0 15.0 35.0 2.0 35.5 86-87 24.25653051287744 31.0 7.5 34.0 2.0 35.0 88-89 23.709468190494885 31.0 2.0 34.0 2.0 35.0 90-91 23.20461559246513 31.0 2.0 34.0 2.0 35.0 92-93 22.657350320949348 30.5 2.0 34.0 2.0 35.0 94-95 22.008405464283463 30.0 2.0 34.0 2.0 35.0 96-97 21.353698507754785 29.5 2.0 34.0 2.0 35.0 98 20.947938891173443 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 168832.0 3 28900.0 4 21307.0 5 17007.0 6 16107.0 7 16341.0 8 18495.0 9 21338.0 10 23152.0 11 24998.0 12 26065.0 13 25607.0 14 24423.0 15 25365.0 16 27068.0 17 28720.0 18 30175.0 19 30363.0 20 31531.0 21 33596.0 22 36374.0 23 41128.0 24 47007.0 25 54026.0 26 62085.0 27 72238.0 28 83885.0 29 97173.0 30 113296.0 31 134126.0 32 159637.0 33 193760.0 34 240244.0 35 304606.0 36 386338.0 37 429424.0 38 262088.0 39 25795.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86052917465613 18.11396192364545 13.089444408166173 24.936064493532246 2 15.937394468196594 19.611424137455856 39.38019600896831 25.07098538537923 3 19.409860981130514 23.614076640010172 28.963205757684623 28.01285662117469 4 13.429722314459145 15.64291566713217 36.554680364317946 34.37268165409074 5 14.644587531695633 36.58702900104235 34.15259737859556 14.615786088666455 6 33.606099538868 34.78339806528588 17.430552988782917 14.1799494070632 7 29.291159735502863 31.287365661024047 21.003153055661013 18.41832154781208 8 26.585477988732336 34.314989008779676 20.15841549030304 18.941117512184956 9 26.73193361006155 16.020919872489408 19.61422813847605 37.63291837897299 10-11 25.60795312274121 25.19600924844965 27.780647018983206 21.41539060982593 12-13 26.3099683688852 22.560384859519594 27.449962733881478 23.679684037713724 14-15 23.441252080377865 24.198724700099643 25.036005189654926 27.32401802986757 16-17 23.660525612069183 27.109068576908196 25.682669950725806 23.547735860296807 18-19 23.592826537216542 26.481632718244136 27.00962728377575 22.915913460763573 20-21 24.385480835487478 25.737628623644532 26.771174102101263 23.105716438766727 22-23 23.97656518296762 25.535700202900323 26.55427076843041 23.933463845701652 24-25 23.77809181132704 25.724006911630585 26.643620009413116 23.854281267629258 26-27 23.651701366175754 25.958493132730908 26.55881520192638 23.830990299166956 28-29 23.775018646542748 26.05968047302097 26.459144659457113 23.706156220979167 30-31 23.929969030906978 25.873375749455008 26.324365015277497 23.872290204360517 32-33 23.67452820285821 25.89046600603387 26.26628924669469 24.16871654441323 34-35 24.119716272836854 25.89170567682765 26.261287333829173 23.727290716506317 36-37 24.159455117487692 25.64461069523644 26.233958854415135 23.96197533286074 38-39 23.985143654026523 25.822029258142305 26.249023683818834 23.943803404012336 40-41 24.116775716422207 25.631349877163967 26.416484347597823 23.835390058816007 42-43 24.01982474354162 25.53046735055568 26.291735364410844 24.157972541491855 44-45 23.926658584452728 25.70121766118621 26.267690110282587 24.104433644078476 46-47 24.0212390273808 25.57147427024243 26.1998870359251 24.207399666451675 48-49 23.838887376595093 25.60764772743802 26.222323415621574 24.33114148034531 50-51 23.78725036863552 25.794245352817768 26.309051254251276 24.109453024295437 52-53 23.9164002199791 25.591327488907112 26.37058101838204 24.121691272731756 54-55 23.590208939618627 25.49309883660056 26.559651047000088 24.357041176780726 56-57 23.577183385285558 25.650229275220088 26.484483742876208 24.288103596618143 58-59 23.55149124326658 25.424149752113866 26.551049313137852 24.473309691481703 60-61 23.55397331166046 25.382310308032263 26.735538619580623 24.328177760726653 62-63 23.413721350765694 25.434163873278802 26.71420398762488 24.43791078833062 64-65 23.419304679848132 25.28341732946508 26.619167454401126 24.67811053628566 66-67 23.351959439977932 25.404321987584872 26.562649241698054 24.681069330739135 68-69 23.478694756451166 25.26011089573043 26.543210334749283 24.71798401306912 70-71 23.30870157434617 25.156625132941606 26.60597985327194 24.928693439440288 72-73 23.30324815207668 25.22555725539228 26.60016976606201 24.871024826469025 74-75 23.345440218078203 25.33749844980054 26.518468586876736 24.798592745244523 76-77 23.372864935251037 25.152580650090066 26.638787311852553 24.835767102806344 78-79 23.378960793987833 25.275208113851676 26.51166799332232 24.834163098838168 80-81 23.37382488162023 25.23420767303861 26.535153702309078 24.856813743032077 82-83 23.478360850062572 25.257887275988455 26.56913601401688 24.694615859932096 84-85 23.491653036321626 25.175747999955494 26.522003271282813 24.810595692440074 86-87 23.50009619593651 25.173193478138007 26.556679431973752 24.77003089395173 88-89 23.479916662672146 25.030938367092354 26.5227323353017 24.9664126349338 90-91 23.41257795008524 25.078109583390827 26.587481398064362 24.921831068459575 92-93 23.57624638107947 24.984708368598415 26.58481459036008 24.854230659962038 94-95 23.509660921191 24.8870053814874 26.602428672147067 25.000905025174536 96-97 23.698926013824078 24.72680027845185 26.580816614056356 24.99345709366771 98 23.719692865149902 24.68991877744236 26.509073818350355 25.081314539057388 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 41.5 2 69.5 3 114.5 4 135.5 5 166.0 6 243.5 7 459.5 8 736.5 9 844.0 10 881.5 11 997.5 12 1168.0 13 1352.0 14 1521.5 15 1679.0 16 1758.0 17 1810.0 18 1833.5 19 1810.0 20 1833.5 21 1872.0 22 1999.5 23 2298.5 24 2715.0 25 3308.0 26 4329.5 27 5648.5 28 7601.5 29 10727.0 30 15352.5 31 22065.0 32 29629.5 33 37618.0 34 46602.0 35 56824.0 36 67968.0 37 78431.0 38 88129.0 39 97195.5 40 105393.5 41 112986.0 42 120995.5 43 129301.0 44 136437.5 45 142406.5 46 147627.0 47 151701.0 48 153899.0 49 152422.5 50 150398.0 51 147998.5 52 143985.5 53 140834.0 54 135107.0 55 127328.0 56 116999.5 57 105481.0 58 96226.5 59 84133.5 60 70598.0 61 58676.5 62 47987.0 63 37369.0 64 27571.5 65 21071.0 66 16296.0 67 12684.0 68 9884.0 69 7478.5 70 5577.0 71 4319.5 72 3478.0 73 2656.5 74 1977.0 75 1454.5 76 982.5 77 594.5 78 339.0 79 211.5 80 123.5 81 67.5 82 43.0 83 29.0 84 20.5 85 13.0 86 10.5 87 9.0 88 7.0 89 6.5 90 6.5 91 6.5 92 5.5 93 3.5 94 5.0 95 5.0 96 1.5 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4020846556560726 2 0.02775953912661218 3 0.020871389375280294 4 0.018624610915618393 5 0.02501019180097327 6 0.021462646864665005 7 0.01492925160696395 8 0.011115640800432564 9 0.0 10-11 0.0 12-13 0.005676071898093224 14-15 0.0036214521224813534 16-17 0.006548176694935673 18-19 0.03670230865355593 20-21 0.07987888681587443 22-23 0.09978948277090456 24-25 0.06598433581533374 26-27 0.07692259936895088 28-29 0.05816495551822093 30-31 0.054129623153170284 32-33 0.02104876662209571 34-35 0.3523303379243492 36-37 0.5388129500762869 38-39 0.4922809856617102 40-41 0.5012533180631232 42-43 0.4497400093004803 44-45 0.42332558096221834 46-47 0.42255694622601825 48-49 0.41192909285432805 50-51 0.40733206587436194 52-53 0.4711583118534415 54-55 0.4723703897066801 56-57 0.4417728146310213 58-59 0.4269322516474651 60-61 0.44257101224169065 62-63 0.4212709611866065 64-65 0.4700053597491412 66-67 0.49211838985212947 68-69 0.43405690439455086 70-71 0.3899490956864514 72-73 0.37513809557736444 74-75 0.35732646370965004 76-77 0.35553790980426125 78-79 0.35445886488613415 80-81 0.37057063147186753 82-83 0.36653529910681687 84-85 0.36609185598977834 86-87 0.35169473612326063 88-89 0.3968076825633141 90-91 0.37473899677202976 92-93 0.36402245477693185 94-95 0.3709845117144368 96-97 0.37128014045912916 98 0.36584057155678984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3382621.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.72984872497709 #Duplication Level Percentage of deduplicated Percentage of total 1 75.79195051477913 44.51249788303927 2 12.38055225873408 14.542159225742516 3 4.9393872914513945 8.702684052630442 4 2.4412917688771683 5.735067851187512 5 1.3378804544913219 3.9286758352189457 6 0.8146785523592253 2.8707568883724375 7 0.5092205906372186 2.0934513779037127 8 0.3645283287599076 1.7126954883230467 9 0.2689287665105943 1.4214731197465695 >10 1.0909826051594695 10.673256544992242 >50 0.04329311060577647 1.712087393674056 >100 0.016244550173235277 1.5594406066691684 >500 7.074716447124764E-4 0.2707853470796815 >1k 3.5373581676858315E-4 0.26496838542041606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.956287446923554E-5 0.0 0.0 0.0 3 0.0 2.956287446923554E-5 0.0 0.0 0.0 4 0.0 5.912574893847108E-5 0.0 2.956287446923554E-5 0.0 5 0.0 2.069401212846488E-4 0.0 2.956287446923554E-5 0.0 6 0.0 2.069401212846488E-4 0.0 2.956287446923554E-5 0.0 7 0.0 2.3650299575388433E-4 0.0 2.956287446923554E-5 0.0 8 0.0 2.3650299575388433E-4 0.0 2.956287446923554E-5 0.0 9 0.0 2.3650299575388433E-4 0.0 2.956287446923554E-5 0.0 10-11 0.0 2.6606587022311986E-4 0.0 7.390718617308886E-5 0.0 12-13 0.0 3.547544936308265E-4 0.0 1.7737724681541326E-4 0.0 14-15 0.0 3.695359308654443E-4 0.0 2.2172155851926656E-4 0.0 16-17 0.0 3.8431736810006206E-4 0.0 2.3650299575388433E-4 0.0 18-19 0.0 3.8431736810006206E-4 0.0 2.3650299575388433E-4 0.0 20-21 0.0 5.616946149154753E-4 0.0 2.512844329885021E-4 0.0 22-23 0.0 5.764760521500931E-4 0.0 3.25191619161591E-4 0.0 24-25 0.0 5.912574893847108E-4 0.0 6.060389266193286E-4 0.0 26-27 0.0 5.912574893847108E-4 0.0 0.0015224880351656304 0.0 28-29 0.0 5.912574893847108E-4 0.0 0.0058830120193778725 0.0 30-31 0.0 6.208203638539464E-4 0.0 0.02564579360206183 0.0 32-33 0.0 6.208203638539464E-4 0.0 0.07204472508152701 0.0 34-35 2.956287446923554E-5 6.356018010885642E-4 0.0 0.13289990217644837 0.0 36-37 2.956287446923554E-5 6.651646755577998E-4 0.0 0.2339753699867647 0.0 38-39 2.956287446923554E-5 6.947275500270352E-4 0.0 0.3944426526057752 2.956287446923554E-5 40-41 2.956287446923554E-5 7.09508987261653E-4 0.0 0.5829651030960903 2.956287446923554E-5 42-43 2.956287446923554E-5 7.390718617308886E-4 0.0 0.7907921106148161 2.956287446923554E-5 44-45 2.956287446923554E-5 7.390718617308886E-4 0.0 1.0385585615414792 2.956287446923554E-5 46-47 2.956287446923554E-5 7.390718617308886E-4 0.0 1.335990641576458 2.956287446923554E-5 48-49 2.956287446923554E-5 7.390718617308886E-4 0.0 1.653643727748394 2.956287446923554E-5 50-51 2.956287446923554E-5 7.390718617308886E-4 0.0 1.9909561254423713 2.956287446923554E-5 52-53 2.956287446923554E-5 7.981976106693596E-4 0.0 2.3360139962472886 2.956287446923554E-5 54-55 2.956287446923554E-5 0.001108607792596333 0.0 2.729096756627479 2.956287446923554E-5 56-57 2.956287446923554E-5 0.0011825149787694216 0.0 3.1853701611856606 2.956287446923554E-5 58-59 5.912574893847108E-5 0.0013303293511155994 0.0 3.6735123444216775 2.956287446923554E-5 60-61 5.912574893847108E-5 0.001359892225584835 0.0 4.185083105674565 4.4344311703853315E-5 62-63 5.912574893847108E-5 0.0013746736628194528 0.0 4.710844046672683 5.912574893847108E-5 64-65 5.912574893847108E-5 0.0014485808489925415 0.0 5.27695831132131 7.390718617308886E-5 66-67 5.912574893847108E-5 0.0015077065979310126 0.0 5.930637810147811 8.868862340770663E-5 68-69 5.912574893847108E-5 0.0015077065979310126 0.0 6.635002857251818 8.868862340770663E-5 70-71 5.912574893847108E-5 0.0015372694724002482 0.0 7.36483632071107 8.868862340770663E-5 72-73 5.912574893847108E-5 0.0015668323468694836 0.0 8.115349014861552 8.868862340770663E-5 74-75 5.912574893847108E-5 0.0015668323468694836 0.0 8.893990784069512 8.868862340770663E-5 76-77 5.912574893847108E-5 0.0015668323468694836 0.0 9.742075745405707 8.868862340770663E-5 78-79 5.912574893847108E-5 0.0016111766585733371 0.0 10.657992722211564 8.868862340770663E-5 80-81 5.912574893847108E-5 0.0016998652819810436 0.0 11.600398034541854 8.868862340770663E-5 82-83 5.912574893847108E-5 0.0017146467192156614 0.0 12.567739631486944 8.868862340770663E-5 84-85 5.912574893847108E-5 0.0017294281564502792 0.0 13.54742372852294 8.868862340770663E-5 86 5.912574893847108E-5 0.0017737724681541325 0.0 14.30624359039928 8.868862340770663E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5235 0.0 44.399242 1 GGTATCA 2875 0.0 38.101315 1 TCAACGC 6265 0.0 36.37704 4 ATCAACG 6450 0.0 34.9782 3 CAACGCA 6475 0.0 34.913967 5 TATCAAC 6795 0.0 33.54018 2 AACGCAG 6855 0.0 33.17334 6 ACGCAGA 7995 0.0 27.86396 7 CGCAGAG 8420 0.0 26.183783 8 GTACATG 9820 0.0 25.403214 1 TACATGG 10175 0.0 23.930874 2 ACATGGG 10335 0.0 23.116352 3 GCAGAGT 9945 0.0 21.615288 9 TAAGGCG 800 0.0 21.208199 5 CATGGGG 7085 0.0 18.963558 4 AGAGTAC 8295 0.0 18.31792 10-11 GTATTAA 1780 0.0 18.100016 1 GAGTACA 7595 0.0 17.08922 1 CAGAGTA 9025 0.0 16.607704 10-11 GTATAGC 1365 0.0 16.522064 1 >>END_MODULE