##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920852_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3382621 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.02746272786694 31.0 30.0 34.0 26.0 34.0 2 30.04699905783119 31.0 30.0 34.0 26.0 34.0 3 30.189493295287885 31.0 30.0 34.0 26.0 34.0 4 33.81627560403604 35.0 35.0 37.0 30.0 37.0 5 33.30672250896568 35.0 33.0 37.0 27.0 37.0 6 33.24070801901839 35.0 33.0 37.0 27.0 37.0 7 33.04790456867618 35.0 33.0 37.0 26.0 37.0 8 32.97059114810675 35.0 33.0 37.0 26.0 37.0 9 34.28351979130976 38.0 34.0 39.0 27.0 39.0 10-11 34.079635732173365 37.0 33.5 39.0 26.0 39.0 12-13 33.88940366065249 37.0 33.0 39.0 25.0 39.0 14-15 34.75945354209058 38.0 33.0 40.0 25.0 41.0 16-17 34.627173129948645 38.0 33.0 40.0 24.5 41.0 18-19 34.524537037995096 38.0 33.0 40.0 24.0 41.0 20-21 34.407831087195405 38.0 33.0 40.0 23.0 41.0 22-23 34.25198226464035 38.0 33.0 40.0 22.5 41.0 24-25 34.0668910291753 38.0 33.0 40.0 21.0 41.0 26-27 33.86730245569929 38.0 33.0 40.0 19.0 41.0 28-29 33.80235681147843 38.0 32.5 40.0 18.5 41.0 30-31 33.79026145701809 38.0 33.0 40.0 19.0 41.0 32-33 33.637931651225486 38.0 32.5 40.0 18.0 41.0 34-35 33.45865365939607 38.0 32.0 40.0 17.0 41.0 36-37 33.25723839590661 38.0 32.0 40.0 16.0 41.0 38-39 33.06725007028574 38.0 32.0 40.0 15.5 41.0 40-41 32.83472431584857 37.5 31.0 40.0 14.5 41.0 42-43 32.86614107817577 38.0 31.0 40.0 14.0 41.0 44-45 32.7171357654316 37.5 31.0 40.0 9.0 41.0 46-47 32.468462325516214 37.0 31.0 40.0 9.0 41.0 48-49 32.20562427774202 37.0 31.0 40.0 8.0 41.0 50-51 31.9381702827482 37.0 30.0 40.0 7.0 41.0 52-53 31.675052570181528 36.5 30.0 40.0 2.0 41.0 54-55 31.38438595396883 36.0 30.0 39.5 2.0 41.0 56-57 31.054621992827457 36.0 29.0 39.0 2.0 40.5 58-59 30.71847082484263 35.0 29.0 39.0 2.0 40.0 60-61 30.38309568231262 35.0 28.0 39.0 2.0 40.0 62-63 30.05677446571756 35.0 28.0 38.5 2.0 40.0 64-65 29.6498389858042 34.5 28.0 38.0 2.0 40.0 66-67 29.213944009689527 34.0 27.5 38.0 2.0 40.0 68-69 28.76490035389717 34.0 26.0 37.0 2.0 39.5 70-71 28.33049194692518 34.0 26.0 36.5 2.0 39.0 72-73 27.883213785996126 33.0 26.0 36.0 2.0 39.0 74-75 27.428136790967713 33.0 25.0 35.5 2.0 38.5 76-77 26.009254066595105 31.0 23.0 34.0 2.0 36.0 78-79 26.83849772114582 32.5 25.0 35.0 2.0 37.0 80-81 26.858668766024927 33.0 25.0 35.0 2.0 36.5 82-83 26.51063982633585 33.0 24.0 35.0 2.0 36.0 84-85 26.172220298993 32.5 23.5 35.0 2.0 36.0 86-87 25.616107154777318 32.0 20.5 35.0 2.0 35.0 88-89 25.240419780992312 32.0 19.5 34.5 2.0 35.0 90-91 24.85244430280543 32.0 18.5 34.0 2.0 35.0 92-93 24.526088941090357 31.0 16.0 34.0 2.0 35.0 94-95 24.125595802781334 31.0 8.0 34.0 2.0 35.0 96-97 23.56480034269284 31.0 2.0 34.0 2.0 35.0 98-99 22.92305301125961 31.0 2.0 34.0 2.0 35.0 100-101 20.723468872214774 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 93747.0 3 40927.0 4 21919.0 5 15305.0 6 13035.0 7 13062.0 8 14507.0 9 16707.0 10 18844.0 11 20974.0 12 23155.0 13 25080.0 14 26896.0 15 28461.0 16 29775.0 17 31154.0 18 30217.0 19 29668.0 20 29586.0 21 30626.0 22 33108.0 23 37854.0 24 43867.0 25 50880.0 26 60280.0 27 71080.0 28 83604.0 29 98457.0 30 115796.0 31 137110.0 32 163105.0 33 200150.0 34 248011.0 35 319388.0 36 417109.0 37 473420.0 38 259757.0 39 16000.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.877684373907734 19.446389535607018 13.753117576317674 24.92280851416757 2 16.076409387868164 20.746545356396712 37.98119860309506 25.195846652640068 3 19.22726790259571 24.45872297975923 29.255997443109333 27.058011674535727 4 13.915531503530485 16.646339137692916 36.057163081186225 33.38096627759037 5 14.616149428974436 36.7943926587538 34.206691475312226 14.38276643695954 6 33.51753523590135 35.349393711073006 17.09493880290564 14.038132250120002 7 29.14125667271375 31.477713017653386 20.97156370043719 18.409466609195675 8 26.563674222635942 34.49426013707003 20.06529399315982 18.876771647134213 9 26.559939276816248 15.775979054764544 19.48686659845966 38.177215069959544 10-11 25.557682965249036 25.316865909707364 27.780853223972734 21.344597901070863 12-13 26.24009165267519 22.56929369017738 27.516652889761378 23.673961767386054 14-15 23.363391617410137 24.298953674569365 24.948351120337858 27.38930358768264 16-17 23.669359258098442 27.218133925128573 25.661446994385507 23.451059822387474 18-19 23.59469301431893 26.50633403110707 26.959628086746427 22.93934486782757 20-21 24.304226696668053 25.772346627483678 26.696268808225703 23.227157867622562 22-23 23.956560427294857 25.620161145370346 26.555730365169637 23.86754806216516 24-25 23.78728294291034 25.780281506832093 26.606788168844943 23.825647381412622 26-27 23.669080943757127 26.026210742606153 26.51870492828461 23.78600338535211 28-29 23.7569934115723 26.09678356671199 26.45361298846674 23.69261003324897 30-31 23.973016820427993 25.904304809509583 26.31730843582158 23.805369934240844 32-33 23.75065520359181 25.93163112241088 26.2430977212592 24.074615952738103 34-35 24.084875899364068 25.958249814531342 26.30096396393466 23.65591032216993 36-37 24.134642182058503 25.704417918877304 26.23841518812544 23.922524710938752 38-39 23.958467947389106 25.81197966276721 26.332860280442787 23.8966921094009 40-41 24.09931368113525 25.6432649971465 26.39926548209391 23.85815583962434 42-43 24.000476612925997 25.59052178914934 26.31077794198716 24.098223655937502 44-45 23.843381380048488 25.682669309484886 26.378035471939253 24.095913838527373 46-47 23.93209823148142 25.605156287774445 26.250889952025762 24.211855528718374 48-49 23.757096456221497 25.64310849174029 26.27619428309901 24.323600768939208 50-51 23.69724116091991 25.8124289829636 26.326870998615952 24.163458857500537 52-53 23.934760068791245 25.572913017268473 26.31488463688728 24.177442277053 54-55 23.569640433219828 25.55226480681708 26.432784017782463 24.445310742180627 56-57 23.526308375040042 25.654470229341193 26.342107990082336 24.477113405536432 58-59 23.473357622099535 25.53931689212391 26.41662748209791 24.570698003678643 60-61 23.45465800729985 25.58806226831273 26.528405988618353 24.428873735769063 62-63 23.362180678339833 25.589357142075762 26.45582707795051 24.592635101633896 64-65 23.257643196949374 25.44488552019624 26.374569202164032 24.922902080690353 66-67 23.187591643692283 25.58708154432819 26.2366685968896 24.988658215089927 68-69 23.333322484157488 25.449681078613228 26.264064600332638 24.952931836896646 70-71 23.156874448074703 25.26636193762019 26.26727517854917 25.309488435755934 72-73 23.181305516125565 25.310022260055952 26.16068971422158 25.347982509596907 74-75 23.100977904176574 25.388745832197905 26.086158296148948 25.424117967476572 76-77 23.061564400180977 25.24920060042588 26.289349968886512 25.39988503050663 78-79 23.067820783059677 25.328469172485647 26.115623574779523 25.488086469675153 80-81 22.97609457441057 25.350241783364645 26.097834261491492 25.57582938073329 82-83 23.029088213719415 25.347574040669627 26.094877076626094 25.52846066898486 84-85 22.985723417604376 25.23405008955757 26.01549827892171 25.764728213916342 86-87 22.899676860821902 25.22582836836503 26.04914999959982 25.825344771213253 88-89 22.830209671383344 25.172048813254378 25.956345681421585 26.041395833940694 90-91 22.722121869799796 25.162508677503936 25.930441839826468 26.184927612869796 92-93 22.76720155928764 25.08325990797355 25.95975103611341 26.1897874966254 94-95 22.563129935756272 25.027294198198007 26.02385393191661 26.385721934129116 96-97 22.680980183092903 24.864607897642284 25.992785493410846 26.461626425853968 98-99 22.524155455219375 24.83490477137221 25.90498053594697 26.735959237461447 100-101 22.629590599412648 24.700843570060275 25.946058050190846 26.72350778033623 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 33.0 2 47.5 3 73.5 4 70.0 5 83.5 6 146.0 7 299.0 8 440.0 9 451.5 10 398.0 11 375.5 12 370.0 13 407.5 14 457.5 15 493.5 16 550.5 17 633.5 18 753.5 19 845.0 20 961.5 21 1119.5 22 1348.0 23 1677.0 24 2109.5 25 2653.0 26 3346.5 27 4477.0 28 6095.5 29 8398.5 30 11884.5 31 17066.0 32 23947.0 33 31031.5 34 38199.0 35 47024.0 36 57865.0 37 68317.0 38 77634.0 39 86258.0 40 94729.0 41 103031.5 42 110830.0 43 119330.0 44 127380.0 45 134637.0 46 141057.5 47 146053.5 48 150496.5 49 153302.5 50 151909.5 51 148243.5 52 144843.0 53 141922.0 54 137354.5 55 129119.0 56 118712.0 57 107374.0 58 97369.0 59 86027.0 60 72303.5 61 60098.0 62 49347.0 63 38356.0 64 28552.0 65 21896.0 66 16808.0 67 12934.0 68 10105.0 69 7661.0 70 5817.5 71 4483.0 72 3396.5 73 2682.5 74 2068.0 75 1515.5 76 1066.5 77 651.0 78 368.0 79 192.0 80 103.0 81 58.0 82 35.0 83 18.5 84 9.0 85 5.5 86 2.0 87 1.0 88 1.5 89 1.5 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19514453437142382 2 0.0 3 0.01147039529406339 4 0.015017940230371656 5 0.005853449144908637 6 0.10462301274662458 7 0.13850206688836852 8 0.11990701884721935 9 0.13802906089686073 10-11 0.10960435709469077 12-13 0.11168853974477189 14-15 0.11223545292245274 16-17 0.06422534478441422 18-19 0.0764348119402085 20-21 0.036111051164171216 22-23 0.08140137485104006 24-25 0.05575558124897823 26-27 0.0642992519705873 28-29 0.03883083561534089 30-31 0.023960709757315405 32-33 0.030701045136301112 34-35 0.01915674265606463 36-37 0.022719069029607516 38-39 0.030745389448004968 40-41 0.023975491194550023 42-43 0.012460751588782782 44-45 0.02594142234675419 46-47 0.03306607509383996 48-49 0.008839299466301426 50-51 0.015077065979310128 52-53 0.006326455136416407 54-55 0.012179904281325043 56-57 0.005070032971473896 58-59 0.003680577871419825 60-61 0.022837320527484457 62-63 0.009874000072724671 64-65 0.006917712625801117 66-67 0.03899343142492168 68-69 0.08715135393530637 70-71 0.020974859435922616 72-73 0.042940075166564624 74-75 0.08401768924156741 76-77 0.2566796575791376 78-79 0.0786815903998704 80-81 0.016688242637883464 82-83 0.011588646791940334 84-85 0.012978101891994404 86-87 0.2705594271424437 88-89 0.6230375794391391 90-91 0.2647355408720043 92-93 0.35034962533491043 94-95 0.0010051377319540084 96-97 0.003857955118235238 98-99 0.0030597575075658784 100-101 0.004478775482089185 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3382621.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.845308356367674 #Duplication Level Percentage of deduplicated Percentage of total 1 74.04312726765482 42.090044011996135 2 13.333948038216231 15.15944775680371 3 5.230620354731279 8.920086808793785 4 2.6195490510283683 5.956362942413517 5 1.403284528226697 3.988507085938326 6 0.877078661766619 2.991468418854826 7 0.5779057592178711 2.2995861758562457 8 0.3743556758877523 1.702429106463657 9 0.28452697621096895 1.4556621328575678 >10 1.1881015604018097 11.322373803805922 >50 0.04882701521825274 1.8876164501128483 >100 0.017526011027497235 1.6534019669411788 >500 7.83477554196624E-4 0.31161070522962336 >1k 3.6562285770264043E-4 0.26140263393270113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 8.868862340770663E-5 0.0 0.0 0.0 6 0.0 8.868862340770663E-5 0.0 0.0 0.0 7 0.0 8.868862340770663E-5 0.0 0.0 0.0 8 0.0 8.868862340770663E-5 0.0 0.0 0.0 9 0.0 8.868862340770663E-5 0.0 2.956287446923554E-5 0.0 10-11 2.956287446923554E-5 8.868862340770663E-5 0.0 7.390718617308886E-5 0.0 12-13 2.956287446923554E-5 1.478143723461777E-4 0.0 1.7737724681541326E-4 0.0 14-15 2.956287446923554E-5 1.7737724681541326E-4 0.0 2.2172155851926656E-4 0.0 16-17 2.956287446923554E-5 2.069401212846488E-4 0.0 2.6606587022311986E-4 0.0 18-19 2.956287446923554E-5 2.6606587022311986E-4 0.0 2.6606587022311986E-4 0.0 20-21 4.4344311703853315E-5 3.547544936308265E-4 0.0 2.8084730745773763E-4 0.0 22-23 5.912574893847108E-5 3.547544936308265E-4 0.0 3.547544936308265E-4 0.0 24-25 5.912574893847108E-5 3.547544936308265E-4 0.0 6.060389266193286E-4 0.0 26-27 5.912574893847108E-5 3.547544936308265E-4 0.0 0.0015963952213387193 0.0 28-29 5.912574893847108E-5 3.547544936308265E-4 0.0 0.0058830120193778725 0.0 30-31 5.912574893847108E-5 3.547544936308265E-4 0.0 0.02539450916907333 0.0 32-33 5.912574893847108E-5 3.547544936308265E-4 0.0 0.07123174603362303 0.0 34-35 5.912574893847108E-5 3.990988053346798E-4 0.0 0.13102265964765192 0.0 36-37 5.912574893847108E-5 5.025688659770042E-4 0.0 0.23050173223662954 0.0 38-39 5.912574893847108E-5 5.764760521500931E-4 0.0 0.3890030837034359 0.0 40-41 5.912574893847108E-5 5.912574893847108E-4 0.0 0.5761360790936969 2.956287446923554E-5 42-43 5.912574893847108E-5 5.912574893847108E-4 0.0 0.7831648890017534 2.956287446923554E-5 44-45 5.912574893847108E-5 5.912574893847108E-4 0.0 1.0298522950102893 2.956287446923554E-5 46-47 5.912574893847108E-5 5.912574893847108E-4 0.0 1.3239733331047137 2.956287446923554E-5 48-49 5.912574893847108E-5 5.912574893847108E-4 0.0 1.636940703673276 2.956287446923554E-5 50-51 5.912574893847108E-5 5.912574893847108E-4 0.0 1.9676014546116756 2.956287446923554E-5 52-53 5.912574893847108E-5 6.060389266193286E-4 0.0 2.306140711596126 2.956287446923554E-5 54-55 5.912574893847108E-5 7.09508987261653E-4 0.0 2.6907832713153494 2.956287446923554E-5 56-57 5.912574893847108E-5 7.981976106693596E-4 0.0 3.138054780597649 2.956287446923554E-5 58-59 5.912574893847108E-5 9.164491085463018E-4 0.0 3.6178897961078107 2.956287446923554E-5 60-61 5.912574893847108E-5 9.607934202501551E-4 0.0 4.1195126501018 2.956287446923554E-5 62-63 5.912574893847108E-5 9.755748574847729E-4 0.0 4.636330821572976 2.956287446923554E-5 64-65 5.912574893847108E-5 0.0010051377319540084 0.0 5.189792175948769 2.956287446923554E-5 66-67 5.912574893847108E-5 0.0010642634808924795 0.0 5.826872120760795 2.956287446923554E-5 68-69 5.912574893847108E-5 0.0010642634808924795 0.0 6.513100344377925 2.956287446923554E-5 70-71 5.912574893847108E-5 0.0010938263553617149 0.0 7.2255508376492665 2.956287446923554E-5 72-73 5.912574893847108E-5 0.0011233892298309505 0.0 7.960203049647005 2.956287446923554E-5 74-75 5.912574893847108E-5 0.0011233892298309505 0.0 8.727610926556656 2.956287446923554E-5 76-77 5.912574893847108E-5 0.0011233892298309505 0.0 9.566368800997806 2.956287446923554E-5 78-79 5.912574893847108E-5 0.0011233892298309505 0.0 10.470475409453202 4.4344311703853315E-5 80-81 5.912574893847108E-5 0.0011529521043001862 0.0 11.397197616877563 5.912574893847108E-5 82-83 5.912574893847108E-5 0.0011529521043001862 0.0 12.349343896345466 5.912574893847108E-5 84-85 5.912574893847108E-5 0.0011529521043001862 0.0 13.313197074103186 5.912574893847108E-5 86-87 5.912574893847108E-5 0.0011825149787694216 0.0 14.3241439108904 5.912574893847108E-5 88-89 5.912574893847108E-5 0.0011825149787694216 0.0 15.395177290036337 5.912574893847108E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2935 0.0 42.298637 1 GTATCAA 5010 0.0 41.014744 1 ATCAACG 6355 0.0 31.744797 3 TCAACGC 6325 0.0 31.67022 4 CAACGCA 6380 0.0 31.393019 5 TATCAAC 6635 0.0 30.330915 2 AACGCAG 6825 0.0 29.48523 6 GTACATG 9555 0.0 24.990046 1 ACGCAGA 8020 0.0 24.795595 7 TACATGG 9790 0.0 23.853 2 CGCAGAG 8475 0.0 23.351345 8 ACATGGG 10015 0.0 21.992075 3 TAAGGCG 765 0.0 19.853168 5 GCAGAGT 9865 0.0 19.098646 9 CATGGGG 7445 0.0 18.55357 4 GAGTACA 7650 0.0 18.528866 1 AGAGTAC 8165 0.0 17.870775 10-11 AGTACAT 7440 0.0 17.416075 2 GTGTAAG 1590 0.0 17.351013 1 CAGAGTA 8835 0.0 16.596115 10-11 >>END_MODULE