##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920851_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2202022 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.018497544529527 31.0 30.0 34.0 26.0 34.0 2 30.03900596815109 31.0 30.0 34.0 26.0 34.0 3 30.17199237791448 31.0 30.0 34.0 26.0 34.0 4 33.80774806064608 35.0 35.0 37.0 30.0 37.0 5 33.290873569837174 35.0 33.0 37.0 27.0 37.0 6 33.233780588931445 35.0 33.0 37.0 27.0 37.0 7 33.041045911439575 35.0 33.0 37.0 26.0 37.0 8 32.953379212378444 35.0 33.0 37.0 26.0 37.0 9 34.254256315332 37.0 34.0 39.0 27.0 39.0 10-11 34.05223290230525 37.0 33.5 39.0 25.5 39.0 12-13 33.854168577788954 37.0 33.0 39.0 25.0 39.0 14-15 34.71019544763858 38.0 33.0 40.0 25.0 41.0 16-17 34.569539041844266 38.0 33.0 40.0 24.5 41.0 18-19 34.45700951216655 38.0 33.0 40.0 24.0 41.0 20-21 34.320109426699645 38.0 33.0 40.0 22.5 41.0 22-23 34.16153744149695 38.0 33.0 40.0 22.0 41.0 24-25 33.954601725141714 38.0 33.0 40.0 19.5 41.0 26-27 33.74341764069569 38.0 32.0 40.0 19.0 41.0 28-29 33.66690455408711 38.0 32.5 40.0 18.5 41.0 30-31 33.64829870001299 38.0 32.0 40.0 18.0 41.0 32-33 33.479980445245324 38.0 32.0 40.0 18.0 41.0 34-35 33.297240218308445 38.0 32.0 40.0 16.0 41.0 36-37 33.0757951101306 38.0 31.5 40.0 15.5 41.0 38-39 32.861142168425204 37.5 31.0 40.0 15.0 41.0 40-41 32.600715842076056 37.0 31.0 40.0 12.0 41.0 42-43 32.59936980647787 37.0 31.0 40.0 10.5 41.0 44-45 32.42863173029152 37.0 31.0 40.0 9.0 41.0 46-47 32.142996527736784 37.0 30.5 40.0 8.0 41.0 48-49 31.840187791039327 37.0 30.0 40.0 6.5 41.0 50-51 31.536154270938255 36.0 30.0 40.0 2.0 41.0 52-53 31.242336134698018 36.0 29.5 39.0 2.0 41.0 54-55 30.92309568205949 35.5 29.0 39.0 2.0 40.5 56-57 30.561923995309765 35.0 28.5 39.0 2.0 40.0 58-59 30.191058944915174 35.0 28.0 39.0 2.0 40.0 60-61 29.828355257122773 35.0 28.0 38.0 2.0 40.0 62-63 29.48357895606856 34.0 27.5 38.0 2.0 40.0 64-65 29.057357056378184 34.0 26.5 37.5 2.0 40.0 66-67 28.599350733098944 34.0 26.0 37.0 2.0 39.5 68-69 28.137386002501337 33.5 26.0 36.0 2.0 39.0 70-71 27.70120416598926 33.0 25.5 36.0 2.0 39.0 72-73 27.259971744151514 33.0 24.5 35.5 2.0 38.5 74-75 26.81418214713568 32.5 24.0 35.0 2.0 37.5 76-77 25.469107029811692 30.5 21.5 34.0 2.0 36.0 78-79 26.313304090513174 32.0 23.5 35.0 2.0 36.0 80-81 26.349128437408893 33.0 24.0 35.0 2.0 36.0 82-83 26.009971744151514 32.0 23.0 35.0 2.0 36.0 84-85 25.676893782169298 32.0 21.0 35.0 2.0 35.0 86-87 25.130906957332854 32.0 19.0 34.5 2.0 35.0 88-89 24.753611907601286 31.5 17.5 34.0 2.0 35.0 90-91 24.365823320566278 31.0 14.0 34.0 2.0 35.0 92-93 24.03099946322062 31.0 7.0 34.0 2.0 35.0 94-95 23.617162998371498 31.0 2.0 34.0 2.0 35.0 96-97 23.034066190074395 31.0 2.0 34.0 2.0 35.0 98-99 22.36970089308826 31.0 2.0 34.0 2.0 35.0 100-101 20.16976079258064 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 59892.0 3 26684.0 4 14724.0 5 10503.0 6 9427.0 7 9349.0 8 10340.0 9 11971.0 10 13275.0 11 15006.0 12 16039.0 13 17559.0 14 18835.0 15 19916.0 16 21227.0 17 21841.0 18 21143.0 19 20445.0 20 20525.0 21 21116.0 22 22844.0 23 25637.0 24 29836.0 25 34835.0 26 41270.0 27 48387.0 28 57239.0 29 66918.0 30 78106.0 31 92350.0 32 109862.0 33 133511.0 34 167191.0 35 214200.0 36 272342.0 37 283535.0 38 136305.0 39 7837.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.640539207567976 18.918445492317186 13.73466030178007 24.706354998334767 2 16.681440966529852 20.185356912873715 37.238274640307864 25.894927480288572 3 20.08409551899325 23.646709801424482 28.315428139570585 27.95376654001168 4 14.471388738626418 15.90032806423028 34.59908080245156 35.029202394691744 5 15.210488118800189 36.407718488093366 33.16290337084367 15.218890022262773 6 34.950126904649444 34.124689784846275 16.32544325705113 14.599740053453155 7 30.63871470324876 30.74703849041571 19.785235131286885 18.829011675048648 8 27.690616295787056 33.82583890084688 19.1171001097589 19.366444693607157 9 27.10421518350107 15.694101671730381 18.8460189933601 38.35566415140845 10-11 26.68783435375588 24.747167526149322 26.420942371244678 22.14405574885012 12-13 27.17453865982897 21.940106475356547 26.620953186304597 24.264401678509888 14-15 24.086284071481035 23.62962217018629 23.976966181923245 28.307127576409428 16-17 24.41050829920065 26.65611955992981 24.767660325906053 24.165711814963487 18-19 24.516897097644517 25.599255749185296 26.31512450271743 23.568722650452763 20-21 25.23645340449972 24.892576933813945 25.925319361728565 23.945650299957773 22-23 24.74620434229014 24.629785462479283 26.06935274693335 24.554657448297224 24-25 24.580369074378762 25.017754883104033 25.949891925810714 24.451984116706495 26-27 24.308991320797844 25.221990038650727 25.93854282378191 24.53047581676952 28-29 24.375131606534453 25.283401255744977 25.888217753928778 24.4532493837918 30-31 24.56825811984525 25.14548108121367 25.684843303782124 24.60141749515896 32-33 24.238345433615923 25.190453390365626 25.593960185815277 24.97724099020318 34-35 24.619800618457056 25.196288349242916 25.782110166750847 24.40180086554918 36-37 24.834487172557143 24.96240048221864 25.71014371623595 24.49296862898826 38-39 24.630551046895064 25.0074614356211 25.63712937561526 24.72485814186858 40-41 24.811716716557573 25.00681362907512 25.810095072837697 24.371374581529615 42-43 24.792222567906055 25.021130870600956 25.587588083142766 24.599058478350226 44-45 24.532043826339912 24.967549966238337 25.74151308119629 24.758893126225466 46-47 24.601684684408433 24.973737139716146 25.64704305746257 24.77753511841285 48-49 24.597473388190433 25.1366355987396 25.413108660839423 24.85278235223054 50-51 24.45099497544497 25.358412581258694 25.46444488602492 24.72614755727141 52-53 24.729944351618926 25.076492112808214 25.547752560220648 24.645810975352216 54-55 24.45465749309018 24.871733207797313 25.76324787664042 24.910361422472082 56-57 24.306193259488353 25.00874240999859 25.60842632078514 25.07663800972792 58-59 24.313307678805675 24.88114514835824 25.63633923650872 25.16920793632736 60-61 24.236808306959603 24.9095457585699 25.81546221884578 25.03818371562472 62-63 24.154423720099626 25.057702474144023 25.692974695387257 25.094899110369095 64-65 23.988899501017993 24.896758819610305 25.686900711799854 25.427440967571847 66-67 24.014276099232156 24.98753499004957 25.6807144773339 25.317474433384373 68-69 24.278470132828083 24.72988153490331 25.650158095122517 25.34149023714609 70-71 23.94454066335177 24.695615915318882 25.692287846393747 25.6675555749356 72-73 23.976340640977995 24.772065818777563 25.585464187028695 25.66612935321575 74-75 23.82589815606634 24.867663063671948 25.504389338868688 25.802049441393027 76-77 23.889834995126833 24.641044865465513 25.825559253488034 25.64356088591962 78-79 23.713526657981443 24.71035048358431 25.793572070208064 25.78255078822618 80-81 23.71920490336992 24.71358666684532 25.745598964785586 25.821609464999174 82-83 23.722447307459017 24.768770053573085 25.715013703819018 25.79376893514888 84-85 23.431836132570236 24.693071042738644 25.74247262721922 26.1326201974719 86-87 23.44249748567781 24.684474760484918 25.720229810641605 26.152797943195665 88-89 23.311241877340443 24.580687655111014 25.70263875203416 26.40543171551438 90-91 23.130272609386154 24.611793889236957 25.715558659828364 26.542374841548526 92-93 23.314009007992905 24.482218134515623 25.73295609771214 26.470816759779336 94-95 22.915445711954067 24.395418800049683 25.89950633503777 26.789629152958483 96-97 23.072247120771703 24.215945471608954 25.914473879911558 26.797333527707785 98-99 22.83378690908843 24.236227248833135 25.857905331530382 27.072080510548048 100-101 23.014157695675394 24.04805459982052 25.91847448944372 27.019313215060365 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 27.0 1 18.5 2 27.5 3 47.5 4 43.5 5 46.0 6 91.5 7 191.0 8 297.0 9 340.0 10 307.0 11 284.5 12 288.5 13 284.5 14 304.5 15 371.5 16 422.0 17 456.5 18 530.5 19 584.0 20 665.5 21 822.0 22 987.5 23 1181.0 24 1485.0 25 1927.5 26 2481.0 27 3193.5 28 4209.0 29 5698.5 30 7944.5 31 11265.5 32 15624.0 33 19164.0 34 21971.5 35 25754.5 36 30184.0 37 34654.0 38 39132.5 39 43600.0 40 48286.5 41 53340.5 42 58750.5 43 65463.5 44 71384.5 45 76184.0 46 82226.0 47 87345.0 48 91659.0 49 95996.0 50 97874.5 51 98137.5 52 98314.0 53 99048.5 54 98323.0 55 94284.0 56 88201.5 57 80804.0 58 75042.0 59 68512.0 60 59175.0 61 50528.0 62 42320.0 63 33153.5 64 25137.0 65 19568.5 66 15148.0 67 11689.0 68 9000.0 69 6777.5 70 5290.0 71 4231.0 72 3355.0 73 2902.0 74 2359.5 75 1815.5 76 1320.0 77 864.0 78 564.5 79 325.5 80 173.0 81 107.5 82 67.5 83 29.0 84 15.5 85 12.0 86 10.0 87 5.0 88 3.0 89 2.5 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18755489273040868 2 0.0 3 0.010899073669563702 4 0.01448668541912842 5 0.006357792973912159 6 0.10622055547128957 7 0.13891777647998066 8 0.12061641527650495 9 0.1381911715686764 10-11 0.11094348739476717 12-13 0.11135220265737582 14-15 0.11232857800694089 16-17 0.06441806666781713 18-19 0.07667952454607628 20-21 0.036125887933908016 22-23 0.08072126436520616 24-25 0.055358211679992296 26-27 0.0643272410539041 28-29 0.03898689477216849 30-31 0.024205026107822717 32-33 0.03160731364173473 34-35 0.018800902079997385 36-37 0.02411420049390969 38-39 0.031925203290430346 40-41 0.02506786943999651 42-43 0.012125219457389617 44-45 0.025453878299126896 46-47 0.03267451460521284 48-49 0.008174305252172777 50-51 0.015190583926954408 52-53 0.007311461919998983 54-55 0.011966274633041812 56-57 0.005086234379129727 58-59 0.0032470156973908528 60-61 0.022456633039996877 62-63 0.009536689460868239 64-65 0.006312380166955643 66-67 0.03907772038608152 68-69 0.0873061213739009 70-71 0.020208699095649364 72-73 0.04305134099477662 74-75 0.08453594014955346 76-77 0.2406424640625752 78-79 0.07872310085911949 80-81 0.016008014452171686 82-83 0.011966274633041812 84-85 0.013215126824345986 86-87 0.2545387829912689 88-89 0.611642390493828 90-91 0.26185024491126796 92-93 0.34684031313038655 94-95 0.0010217881565215972 96-97 0.003928207801738584 98-99 0.003383254118260399 100-101 0.004995408765216696 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2202022.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.65765334009591 #Duplication Level Percentage of deduplicated Percentage of total 1 71.72222186212765 36.332794518731106 2 12.819226541409808 12.987838684457891 3 5.779782142457416 8.783706004616537 4 3.088713504433889 6.258679118979389 5 1.8106471857041258 4.586156872730992 6 1.199066196925266 3.644512784140038 7 0.7854460507625868 2.7852197629814945 8 0.5691268968307214 2.3064506436940166 9 0.40594772303262794 1.850792312482932 >10 1.7196984673104199 14.206203076071706 >50 0.06531398995315983 2.274852664874999 >100 0.03237648639361996 3.082811664186343 >500 0.0021626245854681567 0.7279372708746216 >1k 2.7032807318344885E-4 0.1720446211780205 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.270640347825771E-4 2 0.0 0.0 0.0 0.0 2.270640347825771E-4 3 0.0 0.0 0.0 0.0 2.270640347825771E-4 4 0.0 0.0 0.0 0.0 2.270640347825771E-4 5 0.0 0.0 0.0 0.0 2.724768417390925E-4 6 0.0 0.0 0.0 0.0 3.1788964869560794E-4 7 0.0 0.0 0.0 0.0 3.1788964869560794E-4 8 0.0 0.0 0.0 0.0 3.1788964869560794E-4 9 0.0 0.0 0.0 0.0 3.1788964869560794E-4 10-11 0.0 4.541280695651542E-5 0.0 0.0 3.1788964869560794E-4 12-13 0.0 6.811921043477313E-5 0.0 0.0 5.44953683478185E-4 14-15 0.0 9.082561391303084E-5 0.0 0.0 6.130728939129582E-4 16-17 0.0 9.082561391303084E-5 0.0 0.0 6.811921043477314E-4 18-19 0.0 9.082561391303084E-5 0.0 2.270640347825771E-5 6.811921043477314E-4 20-21 0.0 9.082561391303084E-5 0.0 9.082561391303084E-5 7.266049113042467E-4 22-23 0.0 9.082561391303084E-5 0.0 2.270640347825771E-4 7.266049113042467E-4 24-25 0.0 1.3623842086954625E-4 0.0 4.995408765216696E-4 7.720177182607621E-4 26-27 0.0 2.270640347825771E-4 0.0 0.0013169714017389471 7.720177182607621E-4 28-29 0.0 2.270640347825771E-4 0.0 0.005222472799999273 7.720177182607621E-4 30-31 0.0 2.270640347825771E-4 0.0 0.018778195676519126 7.720177182607621E-4 32-33 0.0 2.270640347825771E-4 0.0 0.04925018914434097 8.174305252172776E-4 34-35 0.0 2.951832452173502E-4 0.0 0.0884868543547703 8.174305252172776E-4 36-37 0.0 3.8600885913038106E-4 0.0 0.15601569829910872 8.174305252172776E-4 38-39 0.0 4.7683447304341193E-4 0.0 0.2707965678817015 8.401369286955353E-4 40-41 0.0 5.222472799999273E-4 0.0 0.4049914124382045 8.62843332173793E-4 42-43 0.0 5.903664904347005E-4 0.0 0.5450445090920981 8.62843332173793E-4 44-45 0.0 5.903664904347005E-4 0.0 0.7203379439442477 9.082561391303085E-4 46-47 0.0 6.584857008694737E-4 0.0 0.9255130057737844 0.001021788156521597 48-49 0.0 6.811921043477314E-4 0.0 1.1556651114294043 0.00108990736695637 50-51 0.0 7.266049113042467E-4 0.0 1.409113987053717 0.00108990736695637 52-53 0.0 7.720177182607621E-4 0.0 1.6656282271475944 0.0012261457878259164 54-55 0.0 7.720177182607621E-4 0.0 1.949730747467555 0.0012261457878259164 56-57 0.0 7.947241217390198E-4 0.0 2.279677496410118 0.0012942649982606897 58-59 0.0 8.174305252172776E-4 0.0 2.644387749077893 0.0013623842086954627 60-61 0.0 8.401369286955353E-4 0.0 3.039206692757838 0.0013623842086954627 62-63 0.0 8.62843332173793E-4 0.0 3.4453561317734334 0.0014532098226084935 64-65 0.0 8.62843332173793E-4 0.0 3.867127576382071 0.0014759162260867512 66-67 0.0 9.082561391303084E-4 0.0 4.363557675627219 0.0014986226295650089 68-69 0.0 9.082561391303084E-4 0.0 4.9097602112967085 0.0014986226295650089 70-71 0.0 9.309625426085662E-4 0.0 5.492497350162714 0.0014986226295650089 72-73 0.0 9.536689460868239E-4 0.0 6.110452120823497 0.001634861050434555 74-75 0.0 9.990817530433392E-4 0.0 6.728633955519064 0.0017710994713041014 76-77 4.541280695651542E-5 0.0010444945599998546 0.0 7.396179511376362 0.0018165122782606167 78-79 4.541280695651542E-5 0.0010444945599998546 0.0 8.132480056965825 0.0019073378921736477 80-81 4.541280695651542E-5 0.0010672009634781123 0.0 8.91319432775876 0.0019073378921736477 82-83 4.541280695651542E-5 0.00108990736695637 0.0 9.715411562645604 0.0020662827165214516 84-85 4.541280695651542E-5 0.00108990736695637 0.0 10.523691407261143 0.0020889891199997093 86-87 6.811921043477313E-5 0.00108990736695637 0.0 11.357288891754942 0.0022933467513040285 88-89 9.082561391303084E-5 0.00108990736695637 0.0 12.232370975403516 0.002497704382608348 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3915 0.0 42.150826 1 GGTATCA 2430 0.0 42.076588 1 ATCAACG 5145 0.0 31.191595 3 TCAACGC 5185 0.0 30.859394 4 CAACGCA 5295 0.0 30.035557 5 TATCAAC 5565 0.0 29.263437 2 AACGCAG 5640 0.0 28.030565 6 GTACATG 8415 0.0 24.074862 1 ACGCAGA 6645 0.0 23.575773 7 TACATGG 8605 0.0 23.339195 2 CGCAGAG 6965 0.0 22.490047 8 ACATGGG 9050 0.0 21.405128 3 AGTACCG 370 0.0 20.529345 5 GCAGAGT 7540 0.0 20.145414 9 CATGGGG 6150 0.0 18.991804 4 GAGTACA 6430 0.0 18.933779 1 GAGTACT 2450 0.0 17.33667 12-13 GTATAGG 385 2.4556357E-10 17.293211 1 AGAGTAC 6685 0.0 17.182129 10-11 AGTACAT 6590 0.0 17.14699 2 >>END_MODULE