##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920850_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3999666 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.27842699865439 31.0 30.0 34.0 27.0 34.0 2 30.295059387458853 31.0 30.0 34.0 26.0 34.0 3 30.43318867125405 31.0 30.0 34.0 27.0 34.0 4 34.07486050085182 35.0 35.0 37.0 30.0 37.0 5 33.60443997073756 35.0 35.0 37.0 28.0 37.0 6 33.54127144616575 35.0 35.0 37.0 28.0 37.0 7 33.36172420397103 35.0 35.0 37.0 27.0 37.0 8 33.29035224441241 35.0 33.0 37.0 27.0 37.0 9 34.62837246910117 38.0 35.0 39.0 27.0 39.0 10-11 34.437133500647306 38.0 34.0 39.0 27.0 39.0 12-13 34.25743237060294 37.0 34.0 39.0 26.5 39.0 14-15 35.15247685681754 38.0 34.0 40.0 26.0 41.0 16-17 35.02711626420806 38.0 34.0 40.0 25.5 41.0 18-19 34.93858562189943 38.5 34.0 40.0 25.0 41.0 20-21 34.823988803065056 38.0 34.0 40.0 25.0 41.0 22-23 34.67467621046357 38.0 34.0 40.0 24.5 41.0 24-25 34.48987365445015 38.0 33.0 40.0 24.0 41.0 26-27 34.29891008399201 38.0 33.0 40.0 23.0 41.0 28-29 34.241996456704136 38.0 33.0 40.0 23.5 41.0 30-31 34.23274630931683 38.0 33.0 40.0 23.0 41.0 32-33 34.087086521724565 38.0 33.0 40.0 22.0 41.0 34-35 33.91307149146954 38.0 33.0 40.0 21.0 41.0 36-37 33.711979075252785 38.0 33.0 40.0 19.0 41.0 38-39 33.52946596040769 38.0 32.0 40.0 18.0 41.0 40-41 33.29981403447188 38.0 32.0 40.0 17.0 41.0 42-43 33.3229890945894 38.0 32.0 40.0 16.5 41.0 44-45 33.17205849188407 38.0 32.0 40.0 15.0 41.0 46-47 32.92377238499415 38.0 32.0 40.0 14.5 41.0 48-49 32.65411061823662 37.0 31.0 40.0 10.5 41.0 50-51 32.393724751016705 37.0 31.0 40.0 9.0 41.0 52-53 32.12945855978974 37.0 31.0 40.0 8.0 41.0 54-55 31.84171940857062 36.0 30.0 40.0 7.0 41.0 56-57 31.517149056946256 36.0 30.0 39.0 4.0 41.0 58-59 31.183823224239223 35.5 29.5 39.0 2.0 40.5 60-61 30.853995683639585 35.0 29.0 39.0 2.0 40.0 62-63 30.532399705375397 35.0 29.0 39.0 2.0 40.0 64-65 30.130162368557773 35.0 28.0 38.0 2.0 40.0 66-67 29.696478030915582 34.0 28.0 38.0 2.0 40.0 68-69 29.25562972008163 34.0 28.0 37.0 2.0 39.5 70-71 28.821222822105646 34.0 26.5 36.5 2.0 39.0 72-73 28.378505605218038 34.0 26.0 36.0 2.0 39.0 74-75 27.93402324094062 33.0 26.0 35.5 2.0 38.5 76-77 26.4894919975818 31.5 24.5 34.0 2.0 36.0 78-79 27.329808288992133 33.0 26.0 35.0 2.0 37.0 80-81 27.35826266493252 33.0 26.0 35.0 2.0 36.5 82-83 27.018157766173474 33.0 25.5 35.0 2.0 36.0 84-85 26.702284640767502 33.0 25.0 35.0 2.0 36.0 86-87 26.166754549004843 32.5 24.0 35.0 2.0 35.0 88-89 25.800013051089767 32.0 22.5 35.0 2.0 35.0 90-91 25.433919982318525 32.0 20.0 34.5 2.0 35.0 92-93 25.127293253986707 32.0 19.5 34.0 2.0 35.0 94-95 24.748579631399224 32.0 17.5 34.0 2.0 35.0 96-97 24.215513245355986 32.0 6.0 34.0 2.0 35.0 98-99 23.611476683303056 31.0 2.0 34.0 2.0 35.0 100-101 21.401454896483855 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 91417.0 3 42883.0 4 23005.0 5 16494.0 6 14110.0 7 14187.0 8 15923.0 9 18236.0 10 20890.0 11 23417.0 12 25938.0 13 28654.0 14 30173.0 15 32331.0 16 34010.0 17 35218.0 18 34475.0 19 32968.0 20 33060.0 21 34766.0 22 37415.0 23 42043.0 24 48942.0 25 58374.0 26 69767.0 27 81599.0 28 96775.0 29 113911.0 30 133986.0 31 158853.0 32 189833.0 33 231551.0 34 292955.0 35 378891.0 36 504888.0 37 591926.0 38 341706.0 39 24096.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.168940608946556 19.260018047240482 13.963388452070848 24.60765289174211 2 16.06559147688832 20.61477133340634 38.026125181452656 25.293512008252687 3 18.976739324604246 24.445888623613346 29.37915521019725 27.19821684158516 4 13.838392426239102 16.57885458369071 36.10386914957728 33.47888384049291 5 14.552165941273262 37.030518530223866 34.00581931615909 14.41149621234378 6 33.5406880951052 35.40347704251406 17.03994111238229 14.015893749998437 7 29.29545353257209 31.5806051173735 20.899138257817597 18.22480309223681 8 26.901582908434037 34.373535549351736 19.931999423231744 18.792882118982483 9 26.807981548377924 15.708991360066019 19.355500183775113 38.12752690778095 10-11 25.690643171876737 25.3316532746314 27.625751905741495 21.35195164775036 12-13 26.33568607367698 22.628383542606954 27.486337423189266 23.5495929605268 14-15 23.49443611190654 24.183864624405015 24.88398136893474 27.437717894753703 16-17 23.67018012889241 27.144413467467103 25.724117597095564 23.461288806544918 18-19 23.70452413498366 26.400604222199036 26.993704308949006 22.901167333868298 20-21 24.426087928694216 25.638265756961164 26.717109151404237 23.218537162940383 22-23 24.074570588917528 25.43656756893029 26.652507166182748 23.83635467596943 24-25 23.948591058483544 25.62829620668245 26.59705138192394 23.82606135291007 26-27 23.67900411748724 25.852418429570655 26.542106298119283 23.926471154822824 28-29 23.808964616384127 25.983530958084543 26.43545727572358 23.772047149807754 30-31 24.02012295946999 25.76130687950832 26.2763347034398 23.942235457581884 32-33 23.801492064552008 25.82502911462892 26.105352377358106 24.26812644346097 34-35 24.17635577739406 25.829508327904765 26.168176038190456 23.82595985651072 36-37 24.32652873410297 25.520654435901896 26.180449523931465 23.97236730606367 38-39 24.049586446147963 25.673389620975033 26.152182215296104 24.124841717580896 40-41 24.25249352220656 25.5511282401784 26.284461223394533 23.91191701422051 42-43 24.10325341553745 25.540721018036077 26.10118997757274 24.254835588853734 44-45 23.953455628369273 25.57204506736797 26.298792888374933 24.175706415887817 46-47 24.12101028060418 25.56916851669856 26.06072072898989 24.249100473707372 48-49 23.918573250318804 25.649326132073114 26.054509539169356 24.377591078438726 50-51 23.927753467880052 25.761935876382857 26.122108287028666 24.188202368708424 52-53 24.1013614254699 25.530384349095403 26.108744512629485 24.25950971280521 54-55 23.681592549856887 25.485928772997106 26.32312717771668 24.509351499429318 56-57 23.68306070363029 25.621316311088528 26.165488073739724 24.53013491154146 58-59 23.68083840270433 25.353130758517917 26.2364514653045 24.72957937347325 60-61 23.591758383766745 25.37392580614789 26.444534166826195 24.58978164325917 62-63 23.56280617379138 25.47395949826224 26.331993127229396 24.631241200716982 64-65 23.346928794356316 25.318562355008563 26.297052988792746 25.03745586184238 66-67 23.354440970275974 25.403024802661477 26.24035192901391 25.002182298048638 68-69 23.52967672988979 25.30194861946773 26.209173952859615 24.95920069778287 70-71 23.260483935200394 25.163945218346264 26.277648621637304 25.297922224816045 72-73 23.288867244072982 25.221054769555252 26.188655581786136 25.301422404585633 74-75 23.259777858437023 25.41812162971877 26.028783839190655 25.29331667265355 76-77 23.235919207551888 25.09015033557821 26.3194987301684 25.35443172670151 78-79 23.18365343136617 25.143563692485692 26.28502954096651 25.387753335181625 80-81 23.200404302237928 25.241808022203614 26.168104759491058 25.3896829160674 82-83 23.14940452755844 25.17878801101065 26.257185933405257 25.414621528025656 84-85 22.945978287193025 25.174033400259884 26.210625955122328 25.669362357424763 86-87 22.936195314979603 25.16047440858123 26.239245507042476 25.664084769396695 88-89 22.801085497591647 25.03878259817177 26.221879864336707 25.938252039899872 90-91 22.719417381412736 25.07197808912886 26.22183503545788 25.986769494000523 92-93 22.79232721242133 24.907754748508665 26.286123561653422 26.013794477416585 94-95 22.540532026207522 24.805437523361622 26.407329205436024 26.24670124499483 96-97 22.637564365850185 24.57766913643341 26.423162092366287 26.36160440535012 98-99 22.445974146799504 24.635799060567788 26.31826607211548 26.59996072051723 100-101 22.530425597694894 24.461906760384096 26.50065214899126 26.507015492929746 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 51.5 2 82.0 3 110.0 4 104.5 5 118.0 6 187.5 7 418.0 8 634.5 9 652.5 10 550.0 11 482.5 12 519.5 13 581.0 14 638.0 15 690.5 16 780.5 17 901.0 18 1040.0 19 1155.5 20 1314.0 21 1547.5 22 1837.5 23 2220.5 24 2677.5 25 3333.0 26 4404.5 27 5985.5 28 7910.5 29 10832.5 30 15383.0 31 22000.0 32 30691.0 33 38356.0 34 45620.0 35 54617.0 36 65723.0 37 77136.0 38 87513.5 39 97311.0 40 107092.0 41 116955.5 42 126360.5 43 136598.5 44 145987.0 45 154717.0 46 162878.0 47 169273.5 48 175215.0 49 178749.0 50 177907.5 51 176279.0 52 174306.5 53 172485.0 54 169142.0 55 159653.5 56 146276.5 57 132016.0 58 119872.5 59 105520.0 60 87786.0 61 72925.0 62 60434.5 63 47066.0 64 34448.0 65 25766.5 66 19630.0 67 14731.5 68 10973.0 69 8221.0 70 6197.5 71 4680.0 72 3554.0 73 2851.0 74 2230.5 75 1724.0 76 1244.5 77 756.0 78 457.0 79 262.5 80 145.0 81 72.5 82 38.0 83 19.0 84 11.5 85 7.0 86 5.0 87 3.0 88 2.5 89 1.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19801653438062078 2 0.0 3 0.011750981206930779 4 0.014901244253895201 5 0.005675473902070823 6 0.10648389140493231 7 0.14161182458735302 8 0.1248604258455581 9 0.14136180371060983 10-11 0.11419703545246028 12-13 0.11344697282223067 14-15 0.11545964088001347 16-17 0.06529295196148878 18-19 0.07808151980690388 20-21 0.03622802504009085 22-23 0.08229437158002693 24-25 0.05670473484535958 26-27 0.06420536114765582 28-29 0.03896575364042898 30-31 0.023751983290604767 32-33 0.031165102286040886 34-35 0.019026588720158135 36-37 0.023114430054909586 38-39 0.03187766178475902 40-41 0.02512709811269241 42-43 0.012876075152275216 44-45 0.02575215030455043 46-47 0.03279023798487173 48-49 0.009150764088801415 50-51 0.01522627139366137 52-53 0.006375532356951805 54-55 0.01236353235495164 56-57 0.004837903964981075 58-59 0.0039003256771940453 60-61 0.022789402915143413 62-63 0.010138346551937088 64-65 0.007300609600901675 66-67 0.03967831313914712 68-69 0.08951997491790564 70-71 0.02113926512863824 72-73 0.0447037327616856 74-75 0.08576966176675752 76-77 0.25895912308677776 78-79 0.0795566429796888 80-81 0.016938914399352346 82-83 0.01116343214658424 84-85 0.012638555319369166 86-87 0.2717226888445185 88-89 0.631740250310901 90-91 0.26948500199766684 92-93 0.35579220864942224 94-95 0.001275106471390361 96-97 0.0041378455101000935 98-99 0.003062755740104299 100-101 0.004912910228004039 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3999666.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.02106788680593 #Duplication Level Percentage of deduplicated Percentage of total 1 76.62413838133459 43.691901964100914 2 12.393600762059059 14.133927008306785 3 4.495169559795391 7.6895810589538955 4 2.1252924211910407 4.847457737121938 5 1.1511817866818808 3.2820807404221033 6 0.7243754442926474 2.4782796830727754 7 0.4861637952815993 1.9405105142401502 8 0.3509113728607932 1.6007472971318044 9 0.2525768710534167 1.296198261987651 >10 1.3026631930995622 13.16854689247206 >50 0.07117516797101922 2.7587215547963893 >100 0.020859592517304883 1.9637220583628034 >500 0.0010558057337010378 0.4341401019607801 >1k 8.358461278407363E-4 0.7141851270699718 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.000417534864161E-5 2 0.0 0.0 0.0 2.5002087674320805E-5 5.000417534864161E-5 3 0.0 0.0 0.0 2.5002087674320805E-5 5.000417534864161E-5 4 0.0 0.0 0.0 2.5002087674320805E-5 5.000417534864161E-5 5 0.0 0.0 0.0 2.5002087674320805E-5 5.000417534864161E-5 6 0.0 0.0 0.0 2.5002087674320805E-5 7.500626302296241E-5 7 0.0 0.0 0.0 2.5002087674320805E-5 7.500626302296241E-5 8 0.0 0.0 0.0 2.5002087674320805E-5 7.500626302296241E-5 9 0.0 0.0 0.0 2.5002087674320805E-5 7.500626302296241E-5 10-11 0.0 0.0 0.0 5.000417534864161E-5 7.500626302296241E-5 12-13 0.0 3.7503131511481206E-5 0.0 7.500626302296241E-5 2.0001670139456644E-4 14-15 0.0 5.000417534864161E-5 0.0 7.500626302296241E-5 2.625219205803685E-4 16-17 0.0 5.000417534864161E-5 0.0 1.1250939453444364E-4 3.5002922744049126E-4 18-19 0.0 5.000417534864161E-5 0.0 1.5001252604592482E-4 4.000334027891329E-4 20-21 0.0 5.000417534864161E-5 0.0 1.7501461372024563E-4 4.625386219749349E-4 22-23 0.0 6.250521918580201E-5 0.0 2.875240082546893E-4 5.000417534864161E-4 24-25 0.0 1.0000835069728322E-4 0.0 5.250438411607369E-4 5.375448849978973E-4 26-27 0.0 1.0000835069728322E-4 0.0 0.0011250939453444362 6.250521918580201E-4 28-29 0.0 1.0000835069728322E-4 0.0 0.00433786221149466 6.625553233695013E-4 30-31 0.0 1.1250939453444364E-4 0.0 0.02010167849015393 6.875574110438221E-4 32-33 0.0 1.8751565755740604E-4 0.0 0.056992258853614274 7.250605425553033E-4 34-35 0.0 2.0001670139456644E-4 0.0 0.10684642167620997 7.75064717903945E-4 36-37 0.0 2.5002087674320803E-4 0.0 0.19085343626192786 7.75064717903945E-4 38-39 0.0 3.1252609592901005E-4 0.0 0.33429041324950637 8.125678494154262E-4 40-41 0.0 3.3752818360333086E-4 0.0 0.5029419956566373 8.250688932525866E-4 42-43 0.0 3.875323589519725E-4 0.0 0.6840321166817429 8.625720247640678E-4 44-45 0.0 4.000334027891329E-4 0.0 0.9032504214101877 9.375782877870302E-4 46-47 0.0 4.000334027891329E-4 0.0 1.1652723002370697 9.750814192985114E-4 48-49 0.0 4.000334027891329E-4 0.0 1.4443956070331874 0.001025085594647153 50-51 0.0 4.125344466262933E-4 0.0 1.747783439917233 0.0010750897699957945 52-53 0.0 4.500375781377745E-4 0.0 2.0585468886652034 0.0012376033398788797 54-55 0.0 4.750396658120953E-4 0.0 2.4077135440809307 0.0013501127344133234 56-57 0.0 4.750396658120953E-4 0.0 2.808309493842736 0.0013751148220876443 58-59 0.0 4.750396658120953E-4 0.0 3.235407656539321 0.0013751148220876443 60-61 0.0 5.125427973235765E-4 0.0 3.7015465791393583 0.0013876158659248045 62-63 0.0 5.250438411607369E-4 0.0 4.178523906746213 0.0014876242166220878 64-65 0.0 5.250438411607369E-4 0.0 4.687028866910387 0.001525127348133569 66-67 0.0 6.375532356951805E-4 0.0 5.271977710138796 0.001525127348133569 68-69 0.0 6.500542795323409E-4 0.0 5.899805133728666 0.001525127348133569 70-71 2.5002087674320805E-5 6.625553233695013E-4 0.0 6.565598227451993 0.00155012943580789 72-73 2.5002087674320805E-5 6.750563672066617E-4 0.0 7.261043797157063 0.0016876409180166542 74-75 2.5002087674320805E-5 6.750563672066617E-4 0.0 7.978541208190884 0.0017626471810396169 76-77 2.5002087674320805E-5 6.750563672066617E-4 0.0 8.758118802920045 0.001800150312551098 78-79 2.5002087674320805E-5 6.750563672066617E-4 0.0 9.615840422675294 0.001837653444062579 80-81 2.5002087674320805E-5 6.875574110438221E-4 0.0 10.500501791899623 0.0019126597070855417 82-83 2.5002087674320805E-5 7.000584548809825E-4 0.0 11.406864973225264 0.0021001753646429475 84-85 5.000417534864161E-5 7.125594987181429E-4 0.0 12.322991469787727 0.0021001753646429475 86-87 5.000417534864161E-5 7.250605425553033E-4 0.0 13.268145390140077 0.002150179539991589 88-89 5.000417534864161E-5 7.250605425553033E-4 0.0 14.266878784378495 0.0022001837153402307 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3295 0.0 46.465397 1 GTATCAA 6060 0.0 44.016895 1 TCAACGC 7950 0.0 33.01813 4 ATCAACG 8220 0.0 31.818102 3 CAACGCA 8205 0.0 31.813242 5 TATCAAC 8425 0.0 31.605326 2 AACGCAG 8645 0.0 30.030115 6 GTACATG 12365 0.0 25.110088 1 ACGCAGA 10270 0.0 24.677439 7 TACATGG 12680 0.0 24.106485 2 CGCAGAG 10675 0.0 23.428226 8 ACATGGG 13210 0.0 22.206503 3 GCAGAGT 12290 0.0 19.268143 9 CATGGGG 9440 0.0 19.007032 4 TAAGGTG 1985 0.0 18.888191 5 AGAGTAC 10225 0.0 18.610178 10-11 GAGTACA 9450 0.0 18.56623 1 TATACCG 345 1.0968506E-9 17.883318 5 AGTACAT 9625 0.0 16.963873 2 CAGAGTA 11130 0.0 16.606638 10-11 >>END_MODULE