##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920849_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4688964 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.687112121142324 31.0 30.0 33.0 22.0 34.0 2 28.72189549759819 31.0 28.0 34.0 20.0 34.0 3 28.79813430002875 31.0 28.0 34.0 22.0 34.0 4 32.27816741608594 35.0 32.0 37.0 23.0 37.0 5 32.24942609924069 35.0 32.0 37.0 23.0 37.0 6 32.3709427071737 35.0 33.0 37.0 24.0 37.0 7 32.20666057576898 35.0 32.0 37.0 23.0 37.0 8 32.15001117517644 35.0 32.0 37.0 23.0 37.0 9 33.419766711793905 37.0 33.0 39.0 22.0 39.0 10-11 33.23668351900334 37.0 33.0 39.0 21.5 39.0 12-13 33.05655737600033 37.0 32.0 39.0 19.0 39.0 14-15 33.821807759667166 38.0 33.0 40.0 18.0 41.0 16-17 33.70279170409498 38.0 32.0 40.0 17.5 41.0 18-19 33.5827410916356 38.0 32.0 40.0 17.5 41.0 20-21 33.487730018827186 38.0 32.0 40.0 18.0 41.0 22-23 33.2763476111141 38.0 32.0 40.0 16.5 41.0 24-25 33.081087528076566 38.0 32.0 40.0 15.5 41.0 26-27 33.118123534324425 38.0 32.0 40.0 14.0 41.0 28-29 32.95988516866412 38.0 32.0 40.0 10.0 41.0 30-31 32.71668037971714 38.0 31.0 40.0 9.5 41.0 32-33 32.47794982004554 37.5 31.0 40.0 9.0 41.0 34-35 32.162996559581174 37.0 30.5 40.0 8.0 41.0 36-37 31.864308299231986 37.0 30.0 40.0 6.5 41.0 38-39 31.670497256963372 37.0 30.0 40.0 2.0 41.0 40-41 31.480833186179293 37.0 30.0 40.0 2.0 41.0 42-43 31.254215643370262 37.0 30.0 40.0 2.0 41.0 44-45 30.98559660513495 36.0 29.5 40.0 2.0 41.0 46-47 30.74045535431707 36.0 29.0 39.0 2.0 40.5 48-49 30.448318007986416 36.0 28.0 39.0 2.0 40.0 50-51 29.30506077675154 34.0 26.5 38.0 2.0 39.5 52-53 29.759053385779886 34.5 27.5 38.5 2.0 39.5 54-55 30.413605222816813 36.0 28.0 39.0 2.0 40.0 56-57 30.370022674518296 36.0 28.0 39.0 2.0 41.0 58-59 30.12745523318157 35.0 28.0 39.0 2.0 41.0 60-61 29.802792045321738 35.0 28.0 39.0 2.0 40.0 62-63 29.400862429312745 35.0 27.0 39.0 2.0 40.0 64-65 28.985055227551328 34.0 26.0 38.0 2.0 40.0 66-67 28.60843482696817 34.0 26.0 38.0 2.0 40.0 68-69 28.162208005862276 34.0 26.0 37.0 2.0 40.0 70-71 27.836438710128718 34.0 26.0 36.5 2.0 39.0 72-73 27.376044793690035 33.5 25.0 36.0 2.0 39.0 74-75 26.937703509773158 33.0 24.0 35.5 2.0 38.5 76-77 26.521889696743244 33.0 22.5 35.0 2.0 37.5 78-79 26.06428957441345 32.5 21.5 35.0 2.0 37.0 80-81 25.61772579188068 32.0 20.0 35.0 2.0 36.5 82-83 25.14317427047851 32.0 18.0 35.0 2.0 36.0 84-85 24.742700839673752 32.0 15.0 35.0 2.0 35.5 86-87 24.28343297154766 31.0 7.5 34.0 2.0 35.0 88-89 23.75907087365141 31.0 2.0 34.0 2.0 35.0 90-91 23.266269691983133 31.0 2.0 34.0 2.0 35.0 92-93 22.72976130761507 30.5 2.0 34.0 2.0 35.0 94-95 22.094121963828258 30.0 2.0 34.0 2.0 35.0 96-97 21.451065096682335 29.5 2.0 34.0 2.0 35.0 98 21.0629556976765 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 230630.0 3 40523.0 4 30477.0 5 24892.0 6 23108.0 7 23177.0 8 26368.0 9 29756.0 10 32609.0 11 35494.0 12 36763.0 13 36160.0 14 34113.0 15 35549.0 16 38050.0 17 40527.0 18 41973.0 19 41901.0 20 44013.0 21 46364.0 22 50712.0 23 56401.0 24 64498.0 25 73529.0 26 85452.0 27 99215.0 28 115257.0 29 133694.0 30 155621.0 31 182905.0 32 217861.0 33 264807.0 34 331952.0 35 419024.0 36 533614.0 37 602254.0 38 369849.0 39 39870.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.364524671619314 17.813896090352788 12.847644766198263 24.973934471829637 2 15.999452188982854 19.425937571729538 39.53062323316014 25.04398700612746 3 19.59748883270311 23.63723355216777 28.610805544943396 28.154472070185722 4 13.493123408354382 15.275809162290207 36.234989018058506 34.99607841129691 5 14.622019571767591 36.86390955390235 33.88087353011759 14.633197344212462 6 33.83589138210147 34.45280097647488 17.362442706014633 14.348864935409011 7 29.742932998423928 31.146446859616404 20.73465631934249 18.375963822617177 8 26.947793023442813 34.56276702457282 19.83594658644723 18.653493365537138 9 27.20319456494014 15.87941387479196 19.223329503062935 37.69406205720496 10-11 26.038782344968137 25.18486228353025 27.3176150763383 21.458740295163313 12-13 26.503120424842297 22.31774256620352 27.38148671983914 23.79765028911504 14-15 23.660820541869526 23.939878911551858 24.685218234756668 27.714082311821947 16-17 23.98997878174567 26.93532458106558 25.393335375853805 23.68136126133495 18-19 23.95891392796678 26.42419985814512 26.604969358470953 23.01191685541715 20-21 24.50498055652375 25.648676159559663 26.509966982695637 23.33637630122095 22-23 24.268135968407123 25.297784337863682 26.36266802555516 24.071411668174033 24-25 24.055732763923775 25.48891707576706 26.3568604607612 24.09848969954796 26-27 23.841388797794643 25.806847496066705 26.314272978453868 24.037490727684787 28-29 23.875197790930052 26.07751377201041 26.14496808137196 23.902320355687575 30-31 24.33253787377255 25.733445758189756 26.022122147550903 23.911894220486797 32-33 23.9748803585351 25.76177509857689 25.987011421800293 24.27633312108772 34-35 24.261722220450537 25.86480115935354 26.07920494133566 23.79427167886027 36-37 24.348527479002968 25.603546084538802 26.08394695969483 23.9639794767634 38-39 24.198547014656416 25.75420861745415 26.05805790015101 23.989186467738424 40-41 24.387642140771113 25.55670674440067 26.09899564340459 23.95665547142362 42-43 24.15588430571151 25.516451040871956 25.98723063379565 24.340434019620886 44-45 23.981517288559758 25.580334371038525 26.186625651091376 24.251522689310338 46-47 24.10472551655569 25.490392835812198 26.05755806027351 24.3473235873586 48-49 24.02002162827571 25.62313538039177 26.018939893246397 24.337903098086127 50-51 23.988210760759287 25.721871394497818 26.16346995537543 24.126447889367466 52-53 24.10444092727998 25.52740323976276 26.22294679810176 24.1452090348555 54-55 23.60494581143558 25.405474036097136 26.519620921125238 24.469959231342045 56-57 23.707574687744216 25.523493305866708 26.360613440366343 24.408318566022732 58-59 23.798415258210785 25.406033054116108 26.39510976092217 24.40044192675094 60-61 23.879930513349873 25.38152211239759 26.525161918076616 24.213385456175917 62-63 23.774472636739198 25.399645483035787 26.516538841797022 24.309343038427993 64-65 23.563384893362795 25.251657286661306 26.513522293441312 24.671435526534584 66-67 23.553878161554646 25.353189004958093 26.389560158458437 24.703372675028824 68-69 23.604365591513016 25.281080473188993 26.43961163800721 24.674942297290784 70-71 23.49743337529589 25.125248009633367 26.50570873132012 24.87160988375062 72-73 23.460343068434288 25.335796116492382 26.411572511880404 24.792288303192926 74-75 23.482825884711666 25.4268044644106 26.39159129682012 24.69877835405761 76-77 23.48950538856945 25.15604292020397 26.458430362970752 24.89602132825583 78-79 23.43558590784052 25.183241843061232 26.52621451797852 24.854957731119733 80-81 23.55851668923695 25.290120552287632 26.364032201508174 24.787330556967238 82-83 23.62032185666796 25.24958785105976 26.435478662709812 24.69461162956247 84-85 23.567250723417228 25.295018085965815 26.326018745700065 24.8117124449169 86-87 23.485021814761268 25.39020973632872 26.3909599030027 24.73380854590731 88-89 23.447734776060024 25.139656011953633 26.455007081300696 24.95760213068565 90-91 23.578525724392655 25.099926378487364 26.444487688252394 24.877060208867594 92-93 23.781857630322946 24.965360449328433 26.419001460501494 24.833780459847127 94-95 23.645921392978806 24.96505800403441 26.453922055747498 24.93509854723929 96-97 23.715297196481757 24.765825816343735 26.464901835385284 25.053975151789228 98 23.66877622905288 24.68164445257873 26.327980760277292 25.321598558091097 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 49.5 2 109.5 3 188.0 4 198.0 5 219.5 6 353.0 7 627.0 8 943.0 9 1148.5 10 1218.0 11 1356.0 12 1589.0 13 1852.0 14 2079.5 15 2249.5 16 2519.5 17 2665.5 18 2665.5 19 2655.5 20 2637.0 21 2669.5 22 2826.0 23 3178.5 24 3712.0 25 4639.0 26 6117.5 27 8113.5 28 11291.0 29 16110.5 30 23265.5 31 32930.0 32 42531.5 33 52042.0 34 63344.5 35 76364.5 36 89861.0 37 101870.0 38 112867.5 39 123407.5 40 133428.5 41 144345.5 42 157199.0 43 169395.5 44 179934.0 45 190032.5 46 199497.0 47 207581.5 48 213058.0 49 214790.0 50 214430.0 51 213105.5 52 210919.0 53 207808.5 54 200239.0 55 188912.5 56 174091.5 57 157174.5 58 140440.5 59 120745.0 60 100645.5 61 82962.0 62 67585.5 63 52562.0 64 38671.0 65 28837.0 66 21853.5 67 16955.0 68 13017.5 69 9879.0 70 7400.5 71 5621.0 72 4374.5 73 3365.0 74 2643.0 75 1955.0 76 1301.5 77 838.0 78 500.5 79 273.5 80 165.0 81 123.0 82 77.5 83 40.0 84 29.5 85 22.5 86 16.0 87 10.5 88 9.0 89 8.0 90 6.0 91 6.0 92 6.5 93 6.5 94 5.0 95 3.0 96 2.0 97 2.0 98 1.5 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.40527075916982946 2 0.02593323386573239 3 0.020153705594668673 4 0.017338584813191144 5 0.023224746447189613 6 0.023054133066494006 7 0.015589797661061163 8 0.010471396240192929 9 0.0 10-11 1.0663336293475488E-5 12-13 0.0055342715363137784 14-15 0.0034122676139121564 16-17 0.006664585183422181 18-19 0.03795081386847926 20-21 0.08200105609682651 22-23 0.10116307141620196 24-25 0.06770152212727588 26-27 0.07774638491572979 28-29 0.06033315674848431 30-31 0.05490551857510529 32-33 0.021305345914364025 34-35 0.35626206556501605 36-37 0.5452590380305756 38-39 0.4975192814446859 40-41 0.5062632172053357 42-43 0.45611354661712056 44-45 0.4301269960699208 46-47 0.42931658251161664 48-49 0.418290692784163 50-51 0.41483577182507686 52-53 0.47613929217626755 54-55 0.47748287254924543 56-57 0.44777481763562277 58-59 0.43329400694908304 60-61 0.44822267775994873 62-63 0.4281542788556278 64-65 0.47558479868900677 66-67 0.49607973104506664 68-69 0.4401611955220812 70-71 0.3951939063724951 72-73 0.38016926553498814 74-75 0.3614337836673517 76-77 0.3593970864352979 78-79 0.35810682274378736 80-81 0.37598923770794573 82-83 0.37135068642028385 84-85 0.3707855295967297 86-87 0.3554943053518858 88-89 0.4034579919999386 90-91 0.3790816052330536 92-93 0.36854622897509987 94-95 0.3764370978322717 96-97 0.37538142753921766 98 0.370636242888621 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4688964.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.71218804142535 #Duplication Level Percentage of deduplicated Percentage of total 1 77.61024742992281 44.79057193617254 2 11.813437668947161 13.635586723318724 3 4.327691605626852 7.4928165518770475 4 2.002777120095728 4.62338599040116 5 1.1189863629406918 3.228957569691192 6 0.7014996326633214 2.429104722675385 7 0.452286429346488 1.8271707621320552 8 0.32998778804302326 1.5235453819930376 9 0.2502455321444971 1.299799548688479 >10 1.2953568843702676 13.41217241274858 >50 0.07292792239357263 2.8395178476639993 >100 0.023256608088710527 2.238371710553034 >500 8.90753878348209E-4 0.3401452326331172 >1k 4.082615387313852E-4 0.3188536094517594 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1326672586950976E-5 2 0.0 0.0 0.0 0.0 2.1326672586950976E-5 3 0.0 0.0 0.0 0.0 2.1326672586950976E-5 4 0.0 0.0 0.0 0.0 2.1326672586950976E-5 5 0.0 0.0 0.0 0.0 2.1326672586950976E-5 6 0.0 0.0 0.0 0.0 2.1326672586950976E-5 7 0.0 0.0 0.0 0.0 2.1326672586950976E-5 8 0.0 0.0 0.0 0.0 2.1326672586950976E-5 9 0.0 0.0 0.0 2.1326672586950976E-5 4.265334517390195E-5 10-11 0.0 0.0 0.0 4.265334517390195E-5 4.265334517390195E-5 12-13 0.0 0.0 0.0 6.398001776085294E-5 7.464335405432841E-5 14-15 2.1326672586950976E-5 1.0663336293475488E-5 0.0 6.398001776085294E-5 9.59700266412794E-5 16-17 2.1326672586950976E-5 2.1326672586950976E-5 0.0 8.53066903478039E-5 1.0663336293475489E-4 18-19 2.1326672586950976E-5 2.1326672586950976E-5 0.0 1.0663336293475489E-4 1.0663336293475489E-4 20-21 2.1326672586950976E-5 2.1326672586950976E-5 0.0 1.4928670810865683E-4 1.1729669922823038E-4 22-23 2.1326672586950976E-5 2.1326672586950976E-5 0.0 1.5995004440213232E-4 1.2796003552170587E-4 24-25 2.1326672586950976E-5 2.1326672586950976E-5 0.0 3.945434428585931E-4 1.2796003552170587E-4 26-27 2.1326672586950976E-5 2.1326672586950976E-5 0.0 7.784235494237106E-4 1.2796003552170587E-4 28-29 2.1326672586950976E-5 3.199000888042646E-5 0.0 0.0038814544108250774 1.2796003552170587E-4 30-31 2.1326672586950976E-5 5.3316681467377444E-5 0.0 0.018991401938679844 1.3862337181518134E-4 32-33 2.1326672586950976E-5 7.464335405432841E-5 0.0 0.05546001206236602 1.4928670810865683E-4 34-35 2.1326672586950976E-5 8.53066903478039E-5 0.0 0.1017602182486366 1.4928670810865683E-4 36-37 2.1326672586950976E-5 8.53066903478039E-5 0.0 0.17616897890450856 1.4928670810865683E-4 38-39 2.1326672586950976E-5 8.53066903478039E-5 0.0 0.30815975554514813 1.4928670810865683E-4 40-41 2.1326672586950976E-5 8.53066903478039E-5 0.0 0.4680244932569327 1.4928670810865683E-4 42-43 2.1326672586950976E-5 1.2796003552170587E-4 0.0 0.6363452566494432 1.4928670810865683E-4 44-45 2.1326672586950976E-5 1.2796003552170587E-4 0.0 0.8371572057281736 1.5995004440213232E-4 46-47 2.1326672586950976E-5 1.2796003552170587E-4 0.0 1.073691331390047 1.706133806956078E-4 48-49 2.1326672586950976E-5 1.2796003552170587E-4 0.0 1.331904019736556 1.706133806956078E-4 50-51 2.1326672586950976E-5 1.2796003552170587E-4 0.0 1.6209657399800894 1.706133806956078E-4 52-53 2.1326672586950976E-5 1.2796003552170587E-4 0.0 1.9220450402263698 1.706133806956078E-4 54-55 2.1326672586950976E-5 1.2796003552170587E-4 0.0 2.2556688428403375 1.919400532825588E-4 56-57 2.1326672586950976E-5 1.2796003552170587E-4 0.0 2.63493172479038 1.919400532825588E-4 58-59 2.1326672586950976E-5 1.2796003552170587E-4 0.0 3.044937005274513 1.919400532825588E-4 60-61 2.1326672586950976E-5 1.2796003552170587E-4 0.0 3.4926371795560813 2.1326672586950978E-4 62-63 2.1326672586950976E-5 1.2796003552170587E-4 0.0 3.956982821791765 2.3459339845646073E-4 64-65 2.1326672586950976E-5 1.3862337181518134E-4 0.0 4.4450117339352575 2.5592007104341174E-4 66-67 2.1326672586950976E-5 1.919400532825588E-4 0.0 5.000390278108341 2.6658340733688723E-4 68-69 2.1326672586950976E-5 1.919400532825588E-4 0.0 5.606675589746477 2.7724674363036267E-4 70-71 2.1326672586950976E-5 1.919400532825588E-4 0.0 6.251988712218733 2.7724674363036267E-4 72-73 2.1326672586950976E-5 1.919400532825588E-4 0.0 6.925687635904222 2.7724674363036267E-4 74-75 2.1326672586950976E-5 1.919400532825588E-4 0.0 7.6116174063183255 2.8791007992383816E-4 76-77 2.1326672586950976E-5 1.919400532825588E-4 0.0 8.351461005032242 2.9857341621731366E-4 78-79 2.1326672586950976E-5 1.919400532825588E-4 0.0 9.162013186708194 2.9857341621731366E-4 80-81 2.1326672586950976E-5 1.919400532825588E-4 0.0 10.006645391178093 2.9857341621731366E-4 82-83 2.1326672586950976E-5 1.919400532825588E-4 0.0 10.869511900709837 2.9857341621731366E-4 84-85 2.1326672586950976E-5 2.1326672586950978E-4 0.0 11.733860613986373 2.9857341621731366E-4 86 4.265334517390195E-5 2.1326672586950978E-4 2.1326672586950976E-5 12.400841635806971 2.9857341621731366E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3480 0.0 44.302498 1 GTATCAA 6415 0.0 43.546642 1 TCAACGC 8215 0.0 33.715 4 CAACGCA 8475 0.0 32.843 5 ATCAACG 8735 0.0 31.76042 3 AACGCAG 9050 0.0 31.005331 6 TATCAAC 9195 0.0 30.222698 2 GTACATG 15600 0.0 27.082 1 TACATGG 16375 0.0 25.232239 2 ACGCAGA 11115 0.0 24.787292 7 ACATGGG 16905 0.0 24.141743 3 CGCAGAG 11520 0.0 23.795723 8 CATGGGG 12575 0.0 22.317074 4 GCAGAGT 13100 0.0 19.63118 9 GAGTACA 11610 0.0 18.908138 1 ATGGGGG 7480 0.0 17.962212 5 AGAGTAC 11415 0.0 17.910942 10-11 AGTACAT 11520 0.0 17.395676 2 GTATACG 370 4.1854946E-9 16.169786 1 GTATAGG 1200 0.0 16.107594 1 >>END_MODULE