##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920848_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2128070 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.92247529451569 31.0 29.0 31.0 25.0 34.0 2 28.939335642154628 31.0 28.0 33.0 23.0 34.0 3 29.067505768137327 31.0 28.0 34.0 25.0 34.0 4 32.65591874327442 35.0 32.0 37.0 26.0 37.0 5 32.0186055909815 35.0 32.0 37.0 22.0 37.0 6 31.933422772747136 35.0 32.0 37.0 22.0 37.0 7 31.722659498982647 35.0 32.0 37.0 19.0 37.0 8 31.61359165816914 35.0 32.0 37.0 18.0 37.0 9 32.798148087233976 37.0 32.0 39.0 17.0 39.0 10-11 32.52373794095119 37.0 32.0 39.0 17.0 39.0 12-13 32.300262914283834 37.0 32.0 39.0 16.5 39.0 14-15 32.97995625143909 38.0 32.0 40.0 16.0 41.0 16-17 32.79081585662126 37.5 31.5 40.0 12.0 41.0 18-19 32.666823694709294 37.5 31.0 40.0 10.5 41.0 20-21 32.5205301047428 37.0 31.0 40.0 10.0 41.0 22-23 32.330262162428866 37.0 31.0 40.0 10.0 41.0 24-25 32.085154858627774 37.0 30.5 40.0 10.0 41.0 26-27 31.83709370462438 37.0 30.0 40.0 8.5 41.0 28-29 31.729186774871128 37.0 30.0 40.0 8.0 41.0 30-31 31.674497784377394 37.0 30.0 40.0 8.0 41.0 32-33 31.470446460877696 36.5 30.0 40.0 4.0 41.0 34-35 31.240999591178863 36.0 30.0 39.5 2.0 41.0 36-37 30.985838576738548 36.0 29.5 39.0 2.0 40.0 38-39 30.74425065904787 36.0 29.0 39.0 2.0 40.0 40-41 30.454134732410118 35.5 28.0 39.0 2.0 40.0 42-43 30.414055693656692 36.0 28.0 39.0 2.0 40.0 44-45 30.194129187479735 35.0 28.0 39.0 2.0 40.0 46-47 29.86372299783372 35.0 27.0 39.0 2.0 40.0 48-49 29.510250602658747 35.0 26.5 39.0 2.0 40.0 50-51 29.166155953516565 35.0 26.0 39.0 2.0 40.0 52-53 28.83443660217944 34.5 25.0 38.5 2.0 40.0 54-55 28.486379677360237 34.0 24.0 38.0 2.0 40.0 56-57 28.09486929471305 34.0 23.5 38.0 2.0 40.0 58-59 27.689880502051153 33.5 23.0 38.0 2.0 40.0 60-61 27.2934915204857 33.0 22.0 38.0 2.0 40.0 62-63 26.924315694502532 33.0 21.5 37.0 2.0 39.5 64-65 26.459123055162657 32.5 19.5 37.0 2.0 39.0 66-67 25.958493846537003 32.0 18.0 36.0 2.0 39.0 68-69 25.47354457325182 31.5 16.0 36.0 2.0 39.0 70-71 24.990349236632255 31.0 12.5 35.0 2.0 38.0 72-73 24.50460910590347 31.0 8.0 35.0 2.0 37.5 74-75 24.02117364560376 30.0 7.5 34.5 2.0 37.0 76-77 22.94705084889125 29.0 7.0 33.5 2.0 35.5 78-79 23.7097297081393 30.5 6.5 34.0 2.0 36.0 80-81 23.6953384992035 31.0 2.0 34.0 2.0 36.0 82-83 23.30265710244494 30.0 2.0 34.0 2.0 35.5 84-85 22.915481398638203 30.0 2.0 34.0 2.0 35.0 86-87 22.29981438580498 29.5 2.0 34.0 2.0 35.0 88-89 21.851146108915593 29.0 2.0 34.0 2.0 35.0 90-91 21.37605764847961 29.0 2.0 34.0 2.0 35.0 92-93 20.9436959310549 29.0 2.0 34.0 2.0 35.0 94-95 20.416368117590117 28.5 2.0 34.0 2.0 35.0 96-97 19.7062514390974 27.0 2.0 33.5 2.0 35.0 98-99 18.906667778785472 26.0 2.0 33.0 2.0 35.0 100-101 16.773112491600372 21.0 2.0 31.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 100161.0 3 38019.0 4 20079.0 5 14061.0 6 11921.0 7 12034.0 8 13183.0 9 15301.0 10 17150.0 11 18981.0 12 20961.0 13 22683.0 14 24213.0 15 25681.0 16 26986.0 17 27562.0 18 26063.0 19 25125.0 20 24897.0 21 25907.0 22 27371.0 23 30939.0 24 35117.0 25 40718.0 26 47166.0 27 55268.0 28 64074.0 29 74374.0 30 85848.0 31 99433.0 32 115457.0 33 137048.0 34 163069.0 35 193085.0 36 213749.0 37 175517.0 38 57071.0 39 1798.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.61720223194826 20.677388955678296 13.665834754111941 24.039574058261497 2 17.053433392698548 21.672501374484863 36.71932784165934 24.554737391157246 3 20.513379649885962 24.819192967829533 29.06583777488802 25.601589607396484 4 14.914748894736421 17.11376166536562 35.05811005215312 32.91337938774484 5 14.397606327986075 37.412356716154186 34.01917531664367 14.17086163921607 6 34.02259078578548 35.66212320271168 16.288311222812244 14.026974788690588 7 29.48152449284582 31.649610952798618 20.46991518883941 18.398949365516152 8 27.120178248154854 34.902021851959184 19.464512207514577 18.513287692371385 9 26.80589963838953 15.587552318236037 19.184082551647716 38.42246549172672 10-11 26.02524301120085 25.587826377796535 27.19175792939662 21.195172681605992 12-13 26.52501570023027 22.71149445023321 27.331878170917296 23.431611678619227 14-15 23.478710842863393 24.396089813852182 24.64042940542778 27.48476993785664 16-17 23.637293347627377 27.574597039628358 25.471538866632816 23.316570746111456 18-19 23.590716414625682 26.384642225321723 27.304366881635882 22.72027447841671 20-21 24.175928263229125 25.7006542934275 27.047199474647364 23.076217968696014 22-23 23.95142657340684 25.65828735946245 26.89406783048633 23.496218236644374 24-25 23.737605491431392 26.0102259103411 26.882413784997294 23.369754813230212 26-27 23.533820551268146 26.141249942988637 26.92337531720652 23.401554188536696 28-29 23.477525701181154 26.19845808190767 27.026814219341972 23.297201997569204 30-31 23.701411932806288 26.09455343629852 26.821788134876247 23.38224649601895 32-33 23.529714530676248 26.087925228584158 26.754734789728897 23.627625451010697 34-35 23.92684488118145 26.107699494947123 26.68212312085644 23.283332503014993 36-37 23.942237031873834 25.810805316716106 26.666679200401017 23.58027845100904 38-39 23.72691063584959 25.998307334234738 26.743296495956244 23.531485533959433 40-41 23.768966344645477 25.885248841214892 26.92226251632452 23.423522297815115 42-43 23.814756077988687 25.857808091515196 26.622604386693148 23.70483144380297 44-45 23.647184900906915 25.91026276765004 26.73661426667826 23.705938064764787 46-47 23.852792273065603 25.937951472103123 26.476915299338565 23.73234095549271 48-49 23.607118847897258 26.105919896160557 26.38389341982861 23.90306783611358 50-51 23.65319744660152 26.085035736064228 26.478878534979984 23.782888282354268 52-53 23.875475373396476 25.90629636983316 26.577064827009316 23.641163429761047 54-55 23.60231268747114 25.85406946756727 26.62854484209834 23.91507300286325 56-57 23.448849176670887 26.02744908132209 26.432458253180897 24.091243488826123 58-59 23.41697127563115 25.776274123866923 26.655220872729647 24.15153372777228 60-61 23.448204388728875 25.896983124901297 26.69752099987216 23.957291486497663 62-63 23.299349299907608 25.88563074109129 26.755353495668423 24.05966646333268 64-65 23.15728480283506 25.79076391971245 26.60615862436978 24.445792653082705 66-67 23.211636867567805 25.92915297445298 26.467847223217888 24.391362934761325 68-69 23.361868315493876 25.629656315093175 26.58315301049392 24.425322358919033 70-71 23.17009520089808 25.546651401058956 26.56934841752095 24.713904980522013 72-73 23.308251236534915 25.46489787466191 26.405682172625283 24.821168716177894 74-75 23.06919953319408 25.80318388348569 26.313326659974496 24.81428992334573 76-77 23.062266780390782 25.541229623970985 26.732106701606533 24.664396894031697 78-79 23.101581242633003 25.490010277642117 26.560639146600657 24.847769333124223 80-81 23.111668922953427 25.561759006015016 26.46536249297089 24.861209578060667 82-83 23.111244579604794 25.58727312118422 26.449155318320006 24.852326980890975 84-85 22.863091209865402 25.528399691706145 26.418833182946088 25.18967591548237 86-87 22.936185606927758 25.44511427088309 26.479435574661153 25.139264547528 88-89 22.88427330838875 25.382694086016045 26.357144595798243 25.37588800979697 90-91 22.77535937793328 25.440488088337165 26.382341046119606 25.401811487609944 92-93 22.910691255168214 25.309255907008826 26.384376185309087 25.395676652513878 94-95 22.66839031280794 25.164928218220744 26.54457349861164 25.622107970359675 96-97 22.80810373967243 24.95267226367911 26.52904949082005 25.710174505828416 98-99 22.64502765027199 25.08559648271999 26.350488344028783 25.91888752297924 100-101 22.94751781048516 24.729670670501324 26.493684091806237 25.829127427207276 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 105.0 1 70.0 2 61.5 3 102.0 4 94.5 5 88.0 6 165.5 7 328.5 8 515.5 9 581.0 10 486.5 11 412.0 12 426.0 13 434.5 14 455.5 15 501.0 16 582.0 17 659.5 18 716.5 19 816.0 20 965.0 21 1146.0 22 1363.5 23 1728.0 24 2181.5 25 2759.5 26 3823.5 27 5284.5 28 6940.0 29 9238.5 30 12387.0 31 16667.5 32 22516.0 33 27306.5 34 31355.5 35 36272.5 36 42138.5 37 48034.5 38 52068.5 39 54810.0 40 57612.5 41 61448.0 42 64912.5 43 68516.0 44 72779.5 45 77636.5 46 81646.5 47 83728.0 48 86049.5 49 87870.5 50 88196.5 51 88351.5 52 88697.5 53 88261.0 54 85547.0 55 80528.5 56 74228.0 57 67595.0 58 61602.5 59 54514.0 60 46364.0 61 38857.0 62 31751.0 63 24836.0 64 18831.5 65 14473.5 66 11074.5 67 8512.0 68 6714.0 69 5122.5 70 3913.0 71 3020.5 72 2311.0 73 1801.0 74 1372.0 75 1009.0 76 707.0 77 452.5 78 276.5 79 171.5 80 101.0 81 63.0 82 37.5 83 21.0 84 10.5 85 2.5 86 1.0 87 1.5 88 3.5 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1714229325163176 2 0.0 3 0.01170074292668944 4 0.013956307828219936 5 0.0059208578665175485 6 0.10145342963342371 7 0.13523991222093257 8 0.11719539300868863 9 0.1341591207056159 10-11 0.10777371045125395 12-13 0.1083141062089123 14-15 0.10995878894961163 16-17 0.06155812543760309 18-19 0.07349382304153529 20-21 0.03463231942558281 22-23 0.07899176248901588 24-25 0.05262984770237822 26-27 0.061135207018566125 28-29 0.03686438885938902 30-31 0.023025558369790467 32-33 0.029416325590793536 34-35 0.017480627986861334 36-37 0.02248516261213212 38-39 0.03084954912197437 40-41 0.0243648000300742 42-43 0.011677247458965166 44-45 0.024670241110489786 46-47 0.030755567251077264 48-49 0.00796496355852956 50-51 0.014919622004915253 52-53 0.006461253624175896 54-55 0.011395301846273853 56-57 0.00439365246443961 58-59 0.00321887907822581 60-61 0.020582029726465764 62-63 0.009774114573298812 64-65 0.006743199236867208 66-67 0.03742828008477165 68-69 0.08416076538835658 70-71 0.019336769937079137 72-73 0.04020074527623621 74-75 0.08009604947205684 76-77 0.22569746295939513 78-79 0.07563191060444441 80-81 0.014637676392223941 82-83 0.0106669423468213 84-85 0.010807915153166954 86-87 0.24115748072196874 88-89 0.5786228836457448 90-91 0.25090809982754325 92-93 0.33135658131546425 94-95 0.0010807915153166953 96-97 0.004205688722645402 98-99 0.0029134379978102225 100-101 0.005169002899340717 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2128070.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.12765397288344 #Duplication Level Percentage of deduplicated Percentage of total 1 74.75441028412814 39.715264425221186 2 11.50281957664592 12.22235636361108 3 5.063329999395612 8.070085324752306 4 2.703794640825142 5.745850643659792 5 1.6830565467929741 4.470842291740661 6 1.042695743755954 3.323758720395879 7 0.6879423618896723 2.5584134629033866 8 0.5056227049648642 2.149003848816531 9 0.37611027743292985 1.7983671007591697 >10 1.5817120820783113 14.096924106313566 >50 0.06828348476874793 2.458491138465764 >100 0.028351630033602238 2.560169565445789 >500 0.001603429104151087 0.6243218555056712 >1k 2.672381840251738E-4 0.2061511524092367 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.879637417942079E-4 2 0.0 0.0 0.0 0.0 1.879637417942079E-4 3 0.0 0.0 0.0 0.0 1.879637417942079E-4 4 0.0 0.0 0.0 0.0 1.879637417942079E-4 5 0.0 4.6990935448551976E-5 0.0 0.0 2.8194561269131183E-4 6 0.0 4.6990935448551976E-5 0.0 0.0 3.2893654813986384E-4 7 0.0 4.6990935448551976E-5 0.0 0.0 3.2893654813986384E-4 8 0.0 4.6990935448551976E-5 0.0 0.0 3.2893654813986384E-4 9 0.0 4.6990935448551976E-5 0.0 0.0 3.2893654813986384E-4 10-11 0.0 4.6990935448551976E-5 0.0 0.0 4.2291841903696777E-4 12-13 0.0 4.6990935448551976E-5 0.0 0.0 6.343776285554516E-4 14-15 0.0 9.398187089710395E-5 0.0 4.6990935448551976E-5 8.458368380739355E-4 16-17 0.0 9.398187089710395E-5 0.0 4.6990935448551976E-5 0.0010807915153166953 18-19 0.0 9.398187089710395E-5 0.0 4.6990935448551976E-5 0.0012217643216623512 20-21 0.0 9.398187089710395E-5 0.0 4.6990935448551976E-5 0.0013862325957322832 22-23 0.0 9.398187089710395E-5 0.0 1.879637417942079E-4 0.0015037099343536632 24-25 0.0 1.4097280634565594E-4 0.0 4.934048222097957E-4 0.0015507008698022152 26-27 0.0 1.879637417942079E-4 0.0 0.0010103051121438675 0.001691673676147871 28-29 0.0 1.879637417942079E-4 0.0 0.00415869778719685 0.001691673676147871 30-31 0.0 1.879637417942079E-4 0.0 0.01867889684079941 0.001762160079320699 32-33 0.0 2.1145920951848388E-4 0.0 0.04877659099559695 0.0019266283533906309 34-35 0.0 2.3495467724275987E-4 0.0 0.08770858101472226 0.002020610224287735 36-37 0.0 2.3495467724275987E-4 0.0 0.15185120790199572 0.002020610224287735 38-39 0.0 2.8194561269131183E-4 0.0 0.2609876554812577 0.002020610224287735 40-41 0.0 2.8194561269131183E-4 0.0 0.3939250118652112 0.002020610224287735 42-43 0.0 3.0544108041558786E-4 0.0 0.5315144708585714 0.002044105692012011 44-45 0.0 3.2893654813986384E-4 0.0 0.6999769744416302 0.002091096627460563 46-47 0.0 3.2893654813986384E-4 0.0 0.911177733815147 0.0021615830306333907 48-49 0.0 3.524320158641398E-4 0.0 1.1396946529014553 0.002208573966081943 50-51 0.0 3.759274835884158E-4 0.0 1.3957012692251665 0.002302555836979047 52-53 0.0 4.4641388676124375E-4 0.0 1.6516608946134292 0.0024435286433247025 54-55 0.0 5.169002899340717E-4 0.0 1.9301761690169967 0.002537510514221807 56-57 0.0 5.403957576583477E-4 0.0 2.267618076473048 0.0025610059819460825 58-59 0.0 6.578730962797277E-4 0.0 2.643287109916497 0.0026314923851189108 60-61 0.0 6.578730962797277E-4 0.0 3.04073644194035 0.0026314923851189108 62-63 0.0 6.578730962797277E-4 0.0 3.4423679672191234 0.0027724651914645664 64-65 0.0 6.578730962797277E-4 0.0 3.870055966204119 0.0027959606591888425 66-67 0.0 6.813685640040037E-4 0.0 4.371825174923757 0.0028429515946373947 68-69 0.0 7.048640317282797E-4 0.0 4.929889524310761 0.0028664470623616703 70-71 0.0 7.518549671768316E-4 0.0 5.526956350120061 0.0028899425300859464 72-73 0.0 7.988459026253836E-4 0.0 6.13043743861809 0.0030544108041558786 74-75 0.0 7.988459026253836E-4 0.0 6.745877720187776 0.0031953836105015343 76-77 0.0 7.988459026253836E-4 0.0 7.411433834413342 0.0031953836105015343 78-79 0.0 7.988459026253836E-4 0.0 8.154994901483503 0.003312860949122914 80-81 0.0 7.988459026253836E-4 0.0 8.9396260461357 0.003383347352295742 82-83 2.3495467724275988E-5 7.988459026253836E-4 0.0 9.725854882593147 0.00357131109408995 84-85 4.6990935448551976E-5 7.988459026253836E-4 0.0 10.523573002767765 0.00357131109408995 86-87 4.6990935448551976E-5 7.988459026253836E-4 0.0 11.347441578519504 0.003759274835884158 88-89 4.6990935448551976E-5 7.988459026253836E-4 0.0 12.225796143923837 0.003947238577678366 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2085 0.0 50.623383 1 GTATCAA 3925 0.0 43.244694 1 TCAACGC 5130 0.0 31.925756 4 ATCAACG 5180 0.0 31.892525 3 TATCAAC 5305 0.0 31.408772 2 CAACGCA 5215 0.0 30.944416 5 AACGCAG 5635 0.0 28.55377 6 GTACATG 7000 0.0 25.062973 1 ACGCAGA 6775 0.0 23.679094 7 GGACCGT 305 0.0 23.342594 6 TACATGG 7385 0.0 23.269512 2 CGCAGAG 6895 0.0 22.921183 8 ACATGGG 7630 0.0 21.58959 3 TAGGACA 930 0.0 20.418156 4 GCAGAGT 7495 0.0 20.38972 9 GAGTACA 5315 0.0 19.858843 1 GTATAGT 300 3.6779966E-9 19.017975 1 TAAGGTG 915 0.0 18.674074 5 GAGTACT 3405 0.0 18.606104 12-13 AGTACAT 5490 0.0 18.590683 2 >>END_MODULE