##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920847_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2649987 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.845038107734112 31.0 30.0 34.0 26.0 34.0 2 29.85567665048923 31.0 30.0 34.0 26.0 34.0 3 29.998430180978247 31.0 30.0 34.0 26.0 34.0 4 33.62135587834959 35.0 35.0 37.0 28.0 37.0 5 33.09495895640243 35.0 33.0 37.0 26.0 37.0 6 33.03255978236874 35.0 33.0 37.0 26.0 37.0 7 32.832447479931034 35.0 33.0 37.0 26.0 37.0 8 32.750006698146066 35.0 33.0 37.0 26.0 37.0 9 34.0388530207884 37.0 33.0 39.0 26.0 39.0 10-11 33.819172131787816 37.0 33.0 39.0 25.0 39.0 12-13 33.61117563972955 37.0 33.0 39.0 23.5 39.0 14-15 34.453235619646435 38.0 33.0 40.0 24.0 41.0 16-17 34.30756245219317 38.0 33.0 40.0 22.5 41.0 18-19 34.194893974951576 38.0 33.0 40.0 22.0 41.0 20-21 34.06405955953746 38.0 33.0 40.0 19.5 41.0 22-23 33.907833698806826 38.0 32.5 40.0 19.0 41.0 24-25 33.70386684915813 38.0 32.0 40.0 18.0 41.0 26-27 33.5074270175665 38.0 32.0 40.0 18.0 41.0 28-29 33.44152386407933 38.0 32.0 40.0 17.5 41.0 30-31 33.42718417109216 38.0 32.0 40.0 17.0 41.0 32-33 33.27810211899153 38.0 32.0 40.0 16.0 41.0 34-35 33.08918704129492 38.0 32.0 40.0 16.0 41.0 36-37 32.87668996112056 38.0 31.0 40.0 15.0 41.0 38-39 32.67822389317382 37.0 31.0 40.0 11.0 41.0 40-41 32.43733101332195 37.0 31.0 40.0 9.0 41.0 42-43 32.45176372563337 37.0 31.0 40.0 9.0 41.0 44-45 32.29095444619162 37.0 31.0 40.0 8.5 41.0 46-47 32.02325860466485 37.0 30.0 40.0 7.5 41.0 48-49 31.734267375651278 37.0 30.0 40.0 4.0 41.0 50-51 31.447524836914294 36.0 30.0 40.0 2.0 41.0 52-53 31.16503760207126 36.0 29.5 39.0 2.0 41.0 54-55 30.864152541125673 36.0 29.0 39.0 2.0 40.5 56-57 30.52413559009912 35.0 28.0 39.0 2.0 40.0 58-59 30.170098947655212 35.0 28.0 39.0 2.0 40.0 60-61 29.814889469269094 35.0 28.0 38.5 2.0 40.0 62-63 29.47562308796232 34.0 27.5 38.0 2.0 40.0 64-65 29.051639498608864 34.0 26.0 38.0 2.0 40.0 66-67 28.60325767635841 34.0 26.0 37.0 2.0 40.0 68-69 28.143791271428878 34.0 26.0 37.0 2.0 39.0 70-71 27.69595171598955 33.0 25.0 36.0 2.0 39.0 72-73 27.233400012905726 33.0 24.5 36.0 2.0 39.0 74-75 26.76490016743478 32.5 23.5 35.0 2.0 38.0 76-77 25.417756011633266 30.5 21.5 34.0 2.0 36.0 78-79 26.23272434921379 32.0 23.0 35.0 2.0 36.5 80-81 26.24501629630636 32.0 23.0 35.0 2.0 36.0 82-83 25.884122450412022 32.0 21.5 35.0 2.0 36.0 84-85 25.54468021918598 32.0 20.5 35.0 2.0 35.5 86-87 24.969327208020268 32.0 18.0 34.5 2.0 35.0 88-89 24.576349619828324 31.0 16.5 34.0 2.0 35.0 90-91 24.174429723617514 31.0 9.0 34.0 2.0 35.0 92-93 23.82189931497777 31.0 4.5 34.0 2.0 35.0 94-95 23.389499080561528 31.0 2.0 34.0 2.0 35.0 96-97 22.795992584114565 31.0 2.0 34.0 2.0 35.0 98-99 22.11790944634823 30.5 2.0 34.0 2.0 35.0 100-101 19.920575459426782 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 80558.0 3 34505.0 4 18581.0 5 12931.0 6 11092.0 7 11064.0 8 12136.0 9 13996.0 10 15906.0 11 17915.0 12 19288.0 13 21322.0 14 22741.0 15 24136.0 16 25133.0 17 26453.0 18 25459.0 19 25115.0 20 24930.0 21 26164.0 22 28126.0 23 31165.0 24 35768.0 25 42113.0 26 50011.0 27 59161.0 28 69475.0 29 80786.0 30 94201.0 31 110599.0 32 131433.0 33 159605.0 34 197232.0 35 251542.0 36 320740.0 37 342070.0 38 167496.0 39 9039.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.10077912081722 18.842028897295855 12.745386764737571 25.311805217149352 2 16.802157897378365 20.74753574262817 37.107276375318065 25.343029984675397 3 20.10026146632489 23.78501942881987 28.50496212361379 27.60975698124145 4 14.254211246773608 16.184932920848226 34.93218489668939 34.62867093568878 5 14.896898657267284 36.55244507174073 33.82191997947031 14.728736291521688 6 34.70657452125118 34.554455258540415 16.598111635971467 14.14085858423694 7 30.516860895720914 30.74895327922127 20.081810486857417 18.652375338200397 8 27.22384890604988 34.546797489827455 19.5009124122063 18.728441191916367 9 26.934542647247206 15.631158248590795 18.575403319819117 38.858895784342884 10-11 26.35522492088032 25.168264485913344 27.028150644243365 21.448359948962967 12-13 26.888166506428725 22.09627120949112 27.123480179290205 23.89208210478995 14-15 23.432276592826927 23.830457352536175 24.46758434613166 28.26968170850524 16-17 24.257985220875042 27.068114623177625 25.05516684099036 23.618733314956973 18-19 24.144841328661332 25.995143078282318 26.479249131458456 23.380766461597897 20-21 24.54979827769258 25.51336557744485 26.281712870119144 23.655123274743424 22-23 24.240809450767873 25.387410520042625 26.316969170874927 24.054810858314582 24-25 24.208535733764215 25.608069700695612 26.29858625057084 23.884808314969337 26-27 23.902506899628484 25.925856699936677 26.174088510839468 23.99754788959537 28-29 24.028244807204274 25.988676784387966 26.28131744924702 23.701760959160733 30-31 24.02752499269639 25.761972450850656 26.138589719684724 24.071912836768234 32-33 23.929322134121403 25.788939158217023 26.086635667072894 24.19510304058868 34-35 24.379859444117336 25.763621540830655 25.95692362274861 23.899595392303397 36-37 24.4507050972106 25.421037076627446 26.087388949218127 24.040868876943826 38-39 24.066397638044204 25.558002242597233 26.333304456260763 24.0422956630978 40-41 24.18346812053526 25.486038856686456 26.33290422619262 23.997588796585664 42-43 24.32042121694288 25.36161297919428 26.109219460941347 24.208746342921497 44-45 24.049686880853173 25.589049379253698 26.13217172313858 24.229092016754546 46-47 24.058929533996384 25.641806245290965 25.97249547404389 24.326768746668762 48-49 24.131346185561643 25.516905109555164 26.05421772001324 24.297530984869955 50-51 23.971659712747467 25.597782294208336 26.13582881847535 24.294729174568847 52-53 24.205547412420202 25.46910875186617 26.070189130398685 24.255154705314943 54-55 23.799289877049397 25.359345008193436 26.237072977059135 24.60429213769803 56-57 23.794483422549092 25.61975689562747 26.160372504174294 24.425387177649146 58-59 23.76188135578829 25.30656374444672 26.242316919805386 24.689237979959604 60-61 23.756974162666424 25.405824364710494 26.36463726805318 24.472564204569903 62-63 23.55359292335312 25.528039748963057 26.271342036989058 24.647025290694767 64-65 23.312136885027822 25.396376728186688 26.19814968214762 25.09333670463787 66-67 23.44673446309768 25.578722513500114 26.005399478549972 24.969143544852233 68-69 23.443589025015733 25.289667159422503 26.254261255265902 25.01248256029586 70-71 23.289674495917918 25.25484115632541 26.136648644649853 25.318835703106824 72-73 23.46719907672636 25.292944767615804 26.05505324887106 25.184802906786775 74-75 23.326638426699457 25.42626211201518 25.862173802696898 25.384925658588465 76-77 23.299279167811694 25.273080464904897 26.102454513697854 25.32518585358556 78-79 23.317078918507374 25.324540691930498 26.005081015266462 25.353299374295666 80-81 23.112104482095923 25.601759383808055 25.927850770919292 25.358285363176737 82-83 23.216004921339707 25.510824871635684 25.788027633473416 25.485142573551194 84-85 23.049802040676532 25.298429742225466 25.82583693269383 25.825931284404174 86-87 23.109070510498423 25.295372461841676 25.912212347731305 25.683344679928595 88-89 22.93410116805978 25.254330698347 25.862005792932564 25.94956234066066 90-91 22.812340142808278 25.476885217617664 25.82306589824229 25.887708741331767 92-93 22.921404946972913 25.250082742397357 25.8360579628481 25.992454347781635 94-95 22.64861778628443 25.124926791126782 25.826826297231044 26.399629125357745 96-97 22.74045607220442 25.021552980707888 25.81931045179463 26.418680495293064 98-99 22.573251710250634 25.165458824168724 25.74093250170572 26.52035696387492 100-101 22.64564814620884 24.93632195138335 25.882770500331432 26.535259402076377 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 36.0 2 44.5 3 75.5 4 78.5 5 81.0 6 160.0 7 285.5 8 426.5 9 486.5 10 405.0 11 353.5 12 358.0 13 378.0 14 456.0 15 510.5 16 544.0 17 597.5 18 668.0 19 810.5 20 957.0 21 1098.0 22 1339.5 23 1617.0 24 1988.0 25 2546.5 26 3286.0 27 4427.0 28 5857.5 29 7840.5 30 10808.0 31 15023.0 32 20632.0 33 25410.5 34 29707.0 35 34980.5 36 41343.0 37 48167.5 38 53372.0 39 58029.5 40 63836.0 41 71272.0 42 79637.0 43 87233.0 44 92792.0 45 98895.5 46 104386.0 47 108769.0 48 115596.5 49 120269.5 50 120598.0 51 120374.0 52 120733.5 53 120139.0 54 117522.5 55 110849.0 56 99883.0 57 88937.0 58 79400.0 59 68574.5 60 57327.0 61 47689.5 62 40004.0 63 32140.5 64 24492.0 65 18862.5 66 14542.5 67 11839.0 68 9050.5 69 6361.5 70 4967.5 71 4579.0 72 4317.0 73 3233.5 74 2118.0 75 1455.5 76 910.5 77 508.5 78 291.5 79 179.0 80 97.0 81 52.5 82 25.0 83 13.0 84 7.5 85 7.5 86 5.5 87 2.0 88 2.5 89 2.5 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18211410093709893 2 0.0 3 0.011886850765683 4 0.01343402816693063 5 0.00630191770752083 6 0.10271748502917184 7 0.13686859595915 8 0.11913265989606742 9 0.13728369233509446 10-11 0.10903827075378107 12-13 0.10875525049745527 14-15 0.1112458287531222 16-17 0.06252860863091027 18-19 0.07598150481492928 20-21 0.03488696359642519 22-23 0.0799060523693135 24-25 0.05518894998352822 26-27 0.06249087259673349 28-29 0.03790584633056691 30-31 0.02313218895036089 32-33 0.03066052776862679 34-35 0.019132169327623117 36-37 0.02400011773642663 38-39 0.03118883224710159 40-41 0.025943523496530358 42-43 0.012490627312511344 44-45 0.025509559103497486 46-47 0.03105675612748289 48-49 0.008528343723950343 50-51 0.015169885739062116 52-53 0.0066038059809350015 54-55 0.011509490423915287 56-57 0.005188704699306072 58-59 0.0033773750588210433 60-61 0.021320859309875862 62-63 0.009717028800518644 64-65 0.006490597878404687 66-67 0.03877377511663265 68-69 0.0865287263673369 70-71 0.020471798540898502 72-73 0.04345304335455231 74-75 0.08313248329142747 76-77 0.23798229953580904 78-79 0.07890604746362906 80-81 0.015962342456774317 82-83 0.011396282321384973 84-85 0.012320815158715874 86-87 0.2549635149153562 88-89 0.6136067837313919 90-91 0.26426544733993035 92-93 0.3494734125110803 94-95 0.0013207611961870002 96-97 0.0045849281524777295 98-99 0.0031320908366720287 100-101 0.005037760562598986 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2649987.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.45598332680406 #Duplication Level Percentage of deduplicated Percentage of total 1 75.31908443564393 40.26255721781929 2 12.435065045417375 13.294572594711102 3 4.945338776814904 7.930738415964453 4 2.3700126618685107 5.067654293486305 5 1.3410782051732815 3.5844327087841625 6 0.8345414914735196 2.6766741632240794 7 0.5634696313965032 2.1084576254764333 8 0.4001656880718919 1.7113000279624102 9 0.28847708083291695 1.3878743420852564 >10 1.3645460364564548 12.885733891042403 >50 0.08808089198121334 3.2485574241341846 >100 0.047014374477139874 4.461162404243848 >500 0.0023442602942629867 0.8428365565490173 >1k 7.814200980678673E-4 0.5374483345171541 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.773603417677143E-5 0.0 5 3.773603417677143E-5 0.0 0.0 3.773603417677143E-5 0.0 6 3.773603417677143E-5 0.0 0.0 3.773603417677143E-5 0.0 7 1.132081025303143E-4 0.0 0.0 3.773603417677143E-5 0.0 8 1.132081025303143E-4 0.0 0.0 3.773603417677143E-5 0.0 9 1.132081025303143E-4 0.0 0.0 3.773603417677143E-5 0.0 10-11 1.132081025303143E-4 0.0 0.0 3.773603417677143E-5 0.0 12-13 1.132081025303143E-4 0.0 0.0 3.773603417677143E-5 0.0 14-15 1.132081025303143E-4 3.773603417677143E-5 0.0 3.773603417677143E-5 0.0 16-17 1.320761196187E-4 3.773603417677143E-5 0.0 3.773603417677143E-5 0.0 18-19 1.8868017088385716E-4 3.773603417677143E-5 0.0 2.6415223923740005E-4 0.0 20-21 2.264162050606286E-4 3.773603417677143E-5 0.0 3.207562905025572E-4 0.0 22-23 2.264162050606286E-4 3.773603417677143E-5 0.0 4.717004272096429E-4 0.0 24-25 2.6415223923740005E-4 3.773603417677143E-5 0.0 7.547206835354286E-4 0.0 26-27 2.6415223923740005E-4 3.773603417677143E-5 0.0 0.0011320810253031429 0.0 28-29 3.207562905025572E-4 3.773603417677143E-5 0.0 0.005358516853101543 0.0 30-31 3.396243075909429E-4 3.773603417677143E-5 0.0 0.023622757394658918 0.0 32-33 3.396243075909429E-4 3.773603417677143E-5 0.0 0.061415395622695504 0.0 34-35 3.396243075909429E-4 3.773603417677143E-5 0.0 0.11084960039426608 0.0 36-37 3.396243075909429E-4 3.773603417677143E-5 0.0 0.1916424495667337 0.0 38-39 3.773603417677143E-4 3.773603417677143E-5 0.0 0.32741670053475735 0.0 40-41 3.773603417677143E-4 3.773603417677143E-5 0.0 0.4876439016493288 0.0 42-43 3.9622835885610004E-4 3.773603417677143E-5 0.0 0.6581353040599822 0.0 44-45 4.1509637594448577E-4 3.773603417677143E-5 0.0 0.8614947922386034 0.0 46-47 4.717004272096429E-4 3.773603417677143E-5 0.0 1.107080902661032 0.0 48-49 4.905684442980286E-4 3.773603417677143E-5 0.0 1.3740633444616899 0.0 50-51 4.905684442980286E-4 7.547206835354286E-5 0.0 1.6770270948498993 0.0 52-53 5.471724955631858E-4 7.547206835354286E-5 0.0 1.9827078396988362 0.0 54-55 5.660405126515716E-4 7.547206835354286E-5 0.0 2.314784940454425 0.0 56-57 5.660405126515716E-4 7.547206835354286E-5 0.0 2.7082585688156207 0.0 58-59 5.660405126515716E-4 7.547206835354286E-5 0.0 3.1371852012858934 0.0 60-61 5.660405126515716E-4 7.547206835354286E-5 0.0 3.6052818372316544 0.0 62-63 5.660405126515716E-4 7.547206835354286E-5 0.0 4.07566150324511 0.0 64-65 6.037765468283429E-4 7.547206835354286E-5 0.0 4.564720506176068 1.8868017088385716E-5 66-67 6.037765468283429E-4 7.547206835354286E-5 0.0 5.118421335651835 3.773603417677143E-5 68-69 6.037765468283429E-4 7.547206835354286E-5 0.0 5.735933798920523 3.773603417677143E-5 70-71 6.037765468283429E-4 7.547206835354286E-5 0.0 6.408484268036032 3.773603417677143E-5 72-73 6.037765468283429E-4 7.547206835354286E-5 0.0 7.0955819783266865 3.773603417677143E-5 74-75 6.226445639167286E-4 7.547206835354286E-5 0.0 7.787321220821083 3.773603417677143E-5 76-77 6.415125810051144E-4 7.547206835354286E-5 0.0 8.53857018921225 3.773603417677143E-5 78-79 6.415125810051144E-4 7.547206835354286E-5 0.0 9.354253435960253 3.773603417677143E-5 80-81 7.924567177122001E-4 7.547206835354286E-5 0.0 10.223144490897504 3.773603417677143E-5 82-83 7.924567177122001E-4 7.547206835354286E-5 0.0 11.116526232015477 3.773603417677143E-5 84-85 8.113247348005858E-4 7.547206835354286E-5 0.0 11.997323005735499 3.773603417677143E-5 86-87 8.490607689773573E-4 7.547206835354286E-5 0.0 12.901704800816004 3.773603417677143E-5 88-89 8.67928786065743E-4 7.547206835354286E-5 0.0 13.857237790223122 3.773603417677143E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2035 0.0 45.57225 1 GTATCAA 3630 0.0 40.745914 1 TCAACGC 4360 0.0 32.998665 4 ATCAACG 4570 0.0 31.79402 3 CAACGCA 4580 0.0 31.410013 5 AACGCAG 4795 0.0 30.298681 6 TATCAAC 4835 0.0 29.852758 2 GTACATG 7430 0.0 28.227999 1 TACATGG 7805 0.0 26.462063 2 ACATGGG 7785 0.0 25.556162 3 ACGCAGA 5860 0.0 24.710695 7 CGCAGAG 6115 0.0 23.209576 8 CATGGGG 5390 0.0 21.318998 4 GAGTACA 5630 0.0 21.202919 1 GGACCGT 420 0.0 19.21722 6 AGTACAT 5580 0.0 18.719568 2 GCAGAGT 7025 0.0 18.715492 9 TAAGACG 135 0.009422685 17.58638 4 TAAGGTG 1005 0.0 17.479404 5 ATGGGGA 3585 0.0 16.686771 5 >>END_MODULE