##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920846_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2428974 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.611214446922858 31.0 30.0 33.0 22.0 34.0 2 28.644661079122297 31.0 28.0 34.0 18.0 34.0 3 28.72985836818344 31.0 28.0 34.0 22.0 34.0 4 32.1957336719125 35.0 32.0 37.0 22.0 37.0 5 32.160752235305935 35.0 32.0 37.0 22.0 37.0 6 32.27508116595731 35.0 32.0 37.0 23.0 37.0 7 32.10822841249021 35.0 32.0 37.0 22.0 37.0 8 32.052895996416595 35.0 32.0 37.0 22.0 37.0 9 33.32260205337727 37.0 33.0 39.0 22.0 39.0 10-11 33.1317795085497 37.0 32.5 39.0 19.0 39.0 12-13 32.94805934522148 37.0 32.0 39.0 18.0 39.0 14-15 33.72032306644699 38.0 32.5 40.0 17.0 41.0 16-17 33.60736199728774 38.0 32.0 40.0 17.0 41.0 18-19 33.49110529795708 38.0 32.0 40.0 17.5 41.0 20-21 33.40081017746588 38.0 32.0 40.0 17.5 41.0 22-23 33.18098855730856 38.0 32.0 40.0 15.5 41.0 24-25 32.99751849958048 38.0 32.0 40.0 12.0 41.0 26-27 33.03836702245475 38.0 32.0 40.0 10.5 41.0 28-29 32.87885564028269 38.0 32.0 40.0 10.0 41.0 30-31 32.64240807023871 38.0 31.0 40.0 9.0 41.0 32-33 32.406113651278275 37.5 31.0 40.0 8.5 41.0 34-35 32.09083732473053 37.0 30.0 40.0 7.5 41.0 36-37 31.792581970823896 37.0 30.0 40.0 4.0 41.0 38-39 31.60330369942206 37.0 30.0 40.0 2.0 41.0 40-41 31.40314511394523 37.0 30.0 40.0 2.0 41.0 42-43 31.181242985721543 37.0 30.0 40.0 2.0 41.0 44-45 30.907110574258926 36.0 29.0 39.5 2.0 41.0 46-47 30.665821247983715 36.0 28.5 39.0 2.0 40.5 48-49 30.37524815004195 36.0 28.0 39.0 2.0 40.0 50-51 29.245880359361607 34.0 26.5 38.0 2.0 39.5 52-53 29.70551496228449 35.0 27.5 38.5 2.0 39.5 54-55 30.366721916331752 36.0 28.0 39.0 2.0 40.0 56-57 30.32589047886062 36.0 28.0 39.0 2.0 41.0 58-59 30.08665490038181 35.0 28.0 39.0 2.0 41.0 60-61 29.759745884476324 35.0 28.0 39.0 2.0 40.0 62-63 29.370417303766942 35.0 27.0 39.0 2.0 40.0 64-65 28.9561271549222 34.0 26.0 38.0 2.0 40.0 66-67 28.571396811987285 34.0 26.0 38.0 2.0 40.0 68-69 28.116990548272646 34.0 26.0 37.0 2.0 40.0 70-71 27.78124426198057 34.0 25.5 37.0 2.0 39.0 72-73 27.313351233895464 33.5 24.5 36.0 2.0 39.0 74-75 26.866725415751674 33.0 23.5 36.0 2.0 39.0 76-77 26.442409840533493 33.0 22.0 35.0 2.0 37.5 78-79 25.980711403250922 32.0 20.5 35.0 2.0 37.0 80-81 25.53429225673062 32.0 19.5 35.0 2.0 36.5 82-83 25.062347106226746 32.0 17.5 35.0 2.0 36.0 84-85 24.66244471945768 32.0 13.0 35.0 2.0 35.5 86-87 24.207914329260007 31.0 7.0 34.0 2.0 35.0 88-89 23.687323124907884 31.0 2.0 34.0 2.0 35.0 90-91 23.194715752412336 31.0 2.0 34.0 2.0 35.0 92-93 22.65627832986273 30.5 2.0 34.0 2.0 35.0 94-95 22.032740778616816 30.0 2.0 34.0 2.0 35.0 96-97 21.393597461314943 29.5 2.0 34.0 2.0 35.0 98 21.011561671718184 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 125119.0 3 21533.0 4 15788.0 5 12666.0 6 11692.0 7 11616.0 8 13445.0 9 15416.0 10 16919.0 11 18199.0 12 18548.0 13 18653.0 14 17484.0 15 18451.0 16 19951.0 17 21280.0 18 21955.0 19 21986.0 20 22611.0 21 24264.0 22 26244.0 23 29102.0 24 33573.0 25 38755.0 26 44108.0 27 50993.0 28 59529.0 29 68832.0 30 80362.0 31 94758.0 32 112637.0 33 137677.0 34 170958.0 35 215840.0 36 276005.0 37 309300.0 38 191731.0 39 20994.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.05259808287169 17.47281244253058 12.016910733067053 25.457678741530685 2 16.386939437091847 19.03634532215303 38.93621016687271 25.640505073882412 3 20.495330412439056 22.382395572539203 28.02411384899196 29.09816016602978 4 13.403504755347784 14.535753948171918 35.82617296313941 36.23456833334088 5 14.630819862230728 36.47068367424255 34.08928812621273 14.809208337313992 6 35.03568569574341 34.08980474579398 16.597842880814884 14.276666677647725 7 30.5109667579671 30.57544803369167 19.933814046871216 18.97977116147001 8 27.276436639394646 34.61114215142743 19.23041608800609 18.882005121171833 9 26.902017065641708 15.611653315350432 18.85396879505503 38.63236082395283 10-11 26.23100380284178 25.12321050913287 27.024775491534896 21.62101019649045 12-13 26.673197872904563 22.059536768810943 27.10152779996476 24.165737558319734 14-15 23.450832015002725 23.806920232163424 24.485212910822526 28.25703484201133 16-17 23.93038278393519 26.977062360825165 25.323052365454977 23.769502489784667 18-19 23.847676572902042 26.312151126598405 26.579996116278537 23.260176184221013 20-21 24.401098207224294 25.549036658341734 26.599552171744545 23.450312962689427 22-23 24.061758982461605 25.466380005950807 26.407876658416313 24.06398435317128 24-25 23.8329599181336 25.584341403317463 26.637827491858985 23.94487118668995 26-27 23.752895428375073 25.892133911141762 26.452514150620782 23.90245650986238 28-29 23.72602947388888 26.06071953132772 26.38769683776385 23.82555415701955 30-31 24.020697096635537 25.782706024076035 26.327216871556775 23.86938000773165 32-33 23.71130242427462 25.834689120227104 26.326169590101458 24.127838865396818 34-35 24.015277221845636 25.8643316277404 26.290502668680826 23.829888481733136 36-37 24.069570708612083 25.680016039690372 26.312996183952404 23.93741706774514 38-39 23.844128458183707 25.87849711726249 26.354220676415945 23.92315374813786 40-41 24.061084863805647 25.677951973842873 26.375770407021452 23.885192755330024 42-43 23.895840831804698 25.601781399049884 26.311649321896997 24.19072844724842 44-45 23.896733448883225 25.736857921995142 26.4016142813385 23.964794347783133 46-47 23.940859861698254 25.644272101183734 26.261210820257748 24.153657216860264 48-49 23.82250985452461 25.80308640776177 26.25684712250361 24.117556615210002 50-51 23.783867672668276 25.87740135492389 26.303369785771753 24.035361186636084 52-53 23.90546908763071 25.709136926732135 26.331064971909125 24.054329013728033 54-55 23.544877812746844 25.554857093229554 26.654128808400294 24.2461362856233 56-57 23.584976646941527 25.739527299533105 26.516811845501444 24.158684208023924 58-59 23.575013284891106 25.61165788206902 26.552131028813797 24.26119780422607 60-61 23.629169092159923 25.52460938533591 26.7106962598894 24.13552526261477 62-63 23.545105917293675 25.60384586370208 26.68382093833866 24.167227280665585 64-65 23.400981619042813 25.439611157107844 26.664422430342515 24.494984793506823 66-67 23.37037450673814 25.546951910588273 26.55031064121973 24.53236294145385 68-69 23.48636884998366 25.3783031439773 26.607112700613268 24.528215305425775 70-71 23.365193480092074 25.234508958354812 26.630333385881467 24.769964175671646 72-73 23.446473167739768 25.233217790927537 26.588945651273477 24.731363390059222 74-75 23.344982495275275 25.353388894052525 26.569776208032554 24.73185240263965 76-77 23.337429749898277 25.120672170322806 26.66802295921002 24.8738751205689 78-79 23.27914359420278 25.12928497220977 26.6983639807255 24.893207452861947 80-81 23.351872123046387 25.15959520256914 26.61930024142499 24.86923243295948 82-83 23.395733855088892 25.160852138319207 26.628021115896992 24.81539289069491 84-85 23.34488792473245 25.072705928866657 26.62401362341479 24.958392522986102 86-87 23.265845304955988 25.029818474421788 26.7484365825333 24.955899638088916 88-89 23.30328167274353 24.91950890825937 26.684362102674026 25.09284731632307 90-91 23.38637140199898 24.82451823857587 26.696860809052623 25.092249550372532 92-93 23.46479785604837 24.698780497377278 26.778966337365016 25.05745530920933 94-95 23.343877579055505 24.5593613215473 26.864752231571547 25.232008867825645 96-97 23.41273185790399 24.433555275717552 26.8472613334391 25.306451532939356 98 23.491365242674647 24.332284267398617 26.694211188622823 25.482139301303906 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 25.0 1 25.5 2 49.0 3 78.0 4 80.0 5 103.5 6 177.5 7 281.5 8 456.0 9 572.0 10 599.0 11 691.5 12 779.5 13 906.5 14 1044.0 15 1150.0 16 1259.0 17 1313.5 18 1371.5 19 1413.0 20 1414.5 21 1486.0 22 1693.5 23 2002.5 24 2449.5 25 3120.5 26 4230.5 27 5757.5 28 7839.0 29 10625.0 30 14364.0 31 19465.5 32 24230.5 33 28803.5 34 34156.5 35 40021.0 36 46303.0 37 52109.5 38 57494.5 39 63486.0 40 69566.0 41 74443.5 42 78941.5 43 84225.0 44 89759.0 45 94650.0 46 99184.0 47 103964.0 48 107271.0 49 107909.5 50 107758.0 51 108409.0 52 108390.5 53 107120.0 54 104391.5 55 98761.5 56 91381.0 57 83329.5 58 74842.5 59 64563.0 60 53771.0 61 44468.0 62 36133.5 63 27931.0 64 20632.0 65 15385.0 66 11648.0 67 8985.5 68 6705.5 69 4916.5 70 3624.5 71 2716.0 72 2097.0 73 1627.0 74 1265.5 75 906.5 76 601.5 77 389.5 78 243.0 79 154.5 80 88.5 81 54.5 82 31.0 83 18.0 84 15.5 85 13.5 86 11.0 87 6.5 88 5.0 89 2.5 90 0.5 91 0.0 92 1.0 93 2.5 94 2.5 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3791312710634202 2 0.027007287850755093 3 0.02033780518029423 4 0.01832049252071039 5 0.02330201970049906 6 0.022643305362675763 7 0.014903411893252047 8 0.009592527544551732 9 0.0 10-11 4.1169646113955936E-5 12-13 0.005022696825902624 14-15 0.0033553261582874084 16-17 0.006154862094036412 18-19 0.03666156986447776 20-21 0.07935449288465006 22-23 0.09930118642686173 24-25 0.06605669718984229 26-27 0.0770695775253255 28-29 0.059099026996583745 30-31 0.05312942831006013 32-33 0.020378974826408186 34-35 0.3340916782147524 36-37 0.5133237325718596 38-39 0.4690663629993569 40-41 0.47686801093795156 42-43 0.4292141455610476 44-45 0.4041624159007054 46-47 0.4022686121794634 48-49 0.3922232185276582 50-51 0.3881680083854335 52-53 0.4499430623794244 54-55 0.4513839999934129 56-57 0.4212889886841111 58-59 0.40644733126002996 60-61 0.42083612257685754 62-63 0.40146580408024124 64-65 0.4499018927333104 66-67 0.46908694782241395 68-69 0.4136520193299722 70-71 0.3693123104652417 72-73 0.3561380237087758 74-75 0.3375499284883247 76-77 0.3359031426437664 78-79 0.3359031426437664 80-81 0.3521445680357221 82-83 0.3469777774484206 84-85 0.3472865497942753 86-87 0.33246547719325115 88-89 0.3763317351276712 90-91 0.3555822334862374 92-93 0.34570151841888797 94-95 0.35152702334401276 96-97 0.35101240276758827 98 0.3461543845261415 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2428974.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.01285334944967 #Duplication Level Percentage of deduplicated Percentage of total 1 78.18336794014675 50.04740466318679 2 11.987376367905009 15.34692330966724 3 4.353017931661352 8.359472954608885 4 2.0500182546377714 5.249100715912899 5 1.076414419128083 3.445217917743952 6 0.6219022088663734 2.388584093631719 7 0.4055879552715241 1.8173989610769457 8 0.2660726876111694 1.3625657545878178 9 0.19507548539836983 1.1238604594990704 >10 0.8257359363221851 8.586302845718958 >50 0.027068295839527037 1.1443656594106597 >100 0.007716400810420467 0.8095053605351477 >500 5.815047613885583E-4 0.2593670202097078 >1k 6.461164015386013E-5 0.05993028421017034 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 4.1169646113955936E-5 0.0 0.0 0.0 3 0.0 4.1169646113955936E-5 0.0 0.0 0.0 4 0.0 4.1169646113955936E-5 0.0 0.0 0.0 5 0.0 4.1169646113955936E-5 0.0 0.0 0.0 6 0.0 4.1169646113955936E-5 0.0 0.0 0.0 7 8.233929222791187E-5 4.1169646113955936E-5 0.0 0.0 0.0 8 8.233929222791187E-5 4.1169646113955936E-5 0.0 0.0 0.0 9 8.233929222791187E-5 4.1169646113955936E-5 0.0 4.1169646113955936E-5 0.0 10-11 8.233929222791187E-5 4.1169646113955936E-5 0.0 4.1169646113955936E-5 0.0 12-13 1.0292411528488985E-4 4.1169646113955936E-5 0.0 4.1169646113955936E-5 0.0 14-15 1.6467858445582374E-4 4.1169646113955936E-5 0.0 6.17544691709339E-5 0.0 16-17 1.852634075128017E-4 4.1169646113955936E-5 0.0 8.233929222791187E-5 0.0 18-19 2.8818752279769156E-4 4.1169646113955936E-5 0.0 2.058482305697797E-4 0.0 20-21 3.293571689116475E-4 4.1169646113955936E-5 0.0 3.087723458546695E-4 0.0 22-23 3.293571689116475E-4 4.1169646113955936E-5 0.0 4.5286610725351527E-4 0.0 24-25 5.146205764244492E-4 4.1169646113955936E-5 0.0 5.969598686523611E-4 0.0 26-27 5.352053994814272E-4 4.1169646113955936E-5 0.0 8.645625683930746E-4 0.0 28-29 7.410536300512068E-4 4.1169646113955936E-5 0.0 0.004446321780307241 0.0 30-31 8.233929222791187E-4 4.1169646113955936E-5 0.0 0.020481898941693076 0.0 32-33 8.233929222791187E-4 4.1169646113955936E-5 0.0 0.053705803355655515 0.0 34-35 9.263170375640086E-4 4.1169646113955936E-5 0.0 0.09837486938929771 0.0 36-37 9.880715067349425E-4 4.1169646113955936E-5 0.0 0.1708540313729171 0.0 38-39 0.0010704107989628544 4.1169646113955936E-5 0.0 0.30049724698576435 0.0 40-41 0.0010909956220198323 4.1169646113955936E-5 0.0 0.45113698211672915 0.0 42-43 0.0012145045603617001 4.1169646113955936E-5 0.0 0.6098665527090863 0.0 44-45 0.0013997679678745018 4.1169646113955936E-5 0.0 0.7989175676643718 0.0 46-47 0.0015232769062163696 4.1169646113955936E-5 0.0 1.0266474651437192 0.0 48-49 0.0015644465523303255 6.17544691709339E-5 0.0 1.2797996190984342 0.0 50-51 0.0015644465523303255 8.233929222791187E-5 0.0 1.5588063108127135 0.0 52-53 0.0015644465523303255 8.233929222791187E-5 0.0 1.8483318471091086 0.0 54-55 0.0015644465523303255 8.233929222791187E-5 0.0 2.169475671621022 0.0 56-57 0.0016056161984442814 8.233929222791187E-5 0.0 2.5395907901854855 0.0 58-59 0.0016262010215012594 8.233929222791187E-5 0.0 2.9395950718286814 0.0 60-61 0.0016467858445582374 8.233929222791187E-5 0.0 3.377290164489204 0.0 62-63 0.0016467858445582374 8.233929222791187E-5 0.0 3.822848659557492 0.0 64-65 0.0016879554906721933 8.233929222791187E-5 0.0 4.290268236712291 0.0 66-67 0.001811464429014061 8.233929222791187E-5 0.0 4.8262558594698834 0.0 68-69 0.001893803721241973 8.233929222791187E-5 0.0 5.430976206414725 0.0 70-71 0.001914388544298951 8.233929222791187E-5 0.0 6.067108993344515 0.0 72-73 0.0019349733673559289 8.233929222791187E-5 0.0 6.721335839741389 0.0 74-75 0.0019967278365268628 8.233929222791187E-5 0.0 7.3715898152882655 0.0 76-77 0.002017312659583841 8.233929222791187E-5 0.0 8.080057670440276 0.0 78-79 0.002017312659583841 8.233929222791187E-5 0.0 8.857237664956479 0.0 80-81 0.00232608500543851 8.233929222791187E-5 0.0 9.677110582492855 0.0 82-83 0.002470178766837356 8.233929222791187E-5 0.0 10.523229149426879 0.0 84-85 0.002490763589894334 8.233929222791187E-5 0.0 11.362492970282926 0.0 86 0.002511348412951312 8.233929222791187E-5 0.0 12.018737129339383 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3370 0.0 40.01808 1 GGTATCA 2020 0.0 34.178932 1 TCAACGC 3880 0.0 33.80669 4 ATCAACG 3915 0.0 33.387314 3 CAACGCA 3935 0.0 33.334167 5 TATCAAC 4225 0.0 31.26647 2 AACGCAG 4370 0.0 30.432678 6 GTACATG 6875 0.0 25.039026 1 ACGCAGA 5340 0.0 24.556581 7 TACATGG 6800 0.0 24.553055 2 CGCAGAG 5440 0.0 23.681803 8 ACATGGG 7095 0.0 22.430834 3 GAGTACA 5110 0.0 21.79782 1 AGTACAT 5085 0.0 20.566336 2 GCAGAGT 6270 0.0 19.961926 9 TATACCG 140 6.147336E-4 19.655838 5 GTATAGG 660 0.0 19.52687 1 GTATTAG 645 0.0 19.26738 1 CATGGGG 5190 0.0 18.380796 4 GTGTAGC 1480 0.0 17.415857 1 >>END_MODULE