##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920840_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1523292 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.360815917105846 33.0 32.0 34.0 32.0 34.0 2 32.55888431108415 33.0 32.0 34.0 32.0 34.0 3 32.75731245224159 33.0 32.0 34.0 32.0 34.0 4 32.92255982438036 33.0 32.0 34.0 32.0 34.0 5 32.64487570341077 33.0 32.0 34.0 32.0 34.0 6 35.56115242514239 37.0 35.0 37.0 33.0 37.0 7 35.50859323097607 37.0 35.0 37.0 33.0 37.0 8 35.35744098964611 37.0 34.0 37.0 33.0 37.0 9 35.3922130491068 37.0 34.0 37.0 33.0 37.0 10 35.313518353670865 37.0 34.0 37.0 33.0 37.0 11 35.29959981408686 37.0 34.0 37.0 33.0 37.0 12 35.212850195497644 37.0 34.0 37.0 33.0 37.0 13 37.098532651651816 38.0 38.0 38.0 36.0 38.0 14 37.06325116917833 38.0 38.0 38.0 36.0 38.0 15 37.00631330040465 38.0 38.0 38.0 36.0 38.0 16 37.085691384186354 38.0 38.0 38.0 36.0 38.0 17 37.046293159814404 38.0 38.0 38.0 36.0 38.0 18 37.0961109229222 38.0 38.0 38.0 36.0 38.0 19 37.00764068871891 38.0 38.0 38.0 36.0 38.0 20 37.064601534046 38.0 38.0 38.0 36.0 38.0 21 37.15445430029174 38.0 38.0 38.0 36.0 38.0 22 37.11280765605019 38.0 38.0 38.0 36.0 38.0 23 37.577443457984415 39.0 38.0 39.0 36.0 39.0 24 37.59052039924059 39.0 38.0 39.0 36.0 39.0 25 37.451585119596245 39.0 38.0 39.0 36.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 3.0 16 10.0 17 10.0 18 12.0 19 13.0 20 8.0 21 24.0 22 76.0 23 207.0 24 609.0 25 1281.0 26 2702.0 27 5144.0 28 8420.0 29 13120.0 30 19441.0 31 27309.0 32 38092.0 33 55470.0 34 94718.0 35 248703.0 36 865365.0 37 142555.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.33279502551054 18.345005422466606 11.974657518059571 26.347542033963283 2 16.681109071668466 20.35991786210392 37.067088910071085 25.891884156156536 3 18.608644961044895 24.363746412375303 29.00126830574834 28.026340320831462 4 13.299945118860993 15.891109518070074 36.42440188749104 34.38454347557789 5 15.092707110652457 35.76372750595421 32.93432907151091 16.20923631188242 6 33.05466056409408 35.88346817287821 17.1980815234374 13.863789739590308 7 29.391672771865146 30.740527751737684 21.314101301654574 18.553698174742596 8 27.499586422038586 32.78708218778802 20.062207377180474 19.651124012992913 9 27.22038847443563 15.16301536409303 19.403765003689376 38.21283115778196 10 16.297531924279784 26.686544667732782 30.591311449150915 26.42461195883652 11 36.51703022138894 21.70595000827156 22.325266593666875 19.45175317667263 12 25.011291334819585 23.62869364507921 28.419370678766775 22.940644341334426 13 28.96332416897089 19.452212707740866 25.50732229933591 26.077140823952334 14 23.691780696018885 20.48825832473354 25.14691864724557 30.673042332002005 15 24.848174117749007 26.955781922167205 22.37011838184562 25.825925578238166 16 25.739518725283727 26.071038437905376 23.417764729978835 24.771678106832063 17 23.891085885043708 26.114822371547934 25.292064817513648 24.702026925894707 18 24.775551896812956 24.927984916877392 26.319051107732466 23.97741207857719 19 26.259902894520554 24.679575550846454 25.239415686552547 23.821105868080448 20 25.647938806217063 24.673995530732125 24.736623050603562 24.94144261244725 21 27.031915089162155 24.49510665059621 24.216105644879644 24.256872615361992 22 25.33841180811033 24.377991875490714 24.986345362543755 25.297250953855205 23 23.901195568544967 23.90414969684079 25.61708457734958 26.577570157264663 24 24.76288196878865 25.25044443219028 25.133526598971173 24.85314700004989 25 24.914067690239296 24.540534579056413 25.245914768803356 25.29948296190094 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 78.0 1 78.0 2 163.0 3 248.0 4 248.0 5 248.0 6 728.5 7 1209.0 8 1209.0 9 1209.0 10 1697.0 11 2185.0 12 2185.0 13 2185.0 14 3264.0 15 4343.0 16 4343.0 17 4343.0 18 7608.0 19 10873.0 20 10873.0 21 10873.0 22 18021.0 23 25169.0 24 25169.0 25 25169.0 26 36952.0 27 48735.0 28 48735.0 29 48735.0 30 60111.0 31 71487.0 32 71487.0 33 71487.0 34 90080.0 35 108673.0 36 108673.0 37 108673.0 38 118467.0 39 128261.0 40 128261.0 41 128261.0 42 142066.5 43 155872.0 44 155872.0 45 155872.0 46 175216.5 47 194561.0 48 194561.0 49 194561.0 50 194848.0 51 195135.0 52 195135.0 53 195135.0 54 181611.5 55 168088.0 56 168088.0 57 168088.0 58 154094.5 59 140101.0 60 140101.0 61 140101.0 62 125530.0 63 110959.0 64 110959.0 65 110959.0 66 91006.0 67 71053.0 68 71053.0 69 71053.0 70 53070.5 71 35088.0 72 35088.0 73 35088.0 74 27973.0 75 20858.0 76 20858.0 77 20858.0 78 19219.0 79 17580.0 80 17580.0 81 17580.0 82 12472.0 83 7364.0 84 7364.0 85 7364.0 86 5495.5 87 3627.0 88 3627.0 89 3627.0 90 2652.0 91 1677.0 92 1677.0 93 1677.0 94 872.0 95 67.0 96 67.0 97 67.0 98 34.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 6.564729546272153E-5 16 2.625891818508861E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1523292.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.61051654334128 #Duplication Level Percentage of deduplicated Percentage of total 1 89.723663209312 52.587502468585626 2 6.113536826363076 7.166351025997583 3 1.6144679053416866 2.838743936241674 4 0.7463850591776723 1.749840554345429 5 0.4254243058143828 1.2467169156936682 6 0.2536784601380203 0.8920935350765267 7 0.1790741513803885 0.7346939958375542 8 0.1278914286748009 0.5996626156876776 9 0.10481495351502425 0.5528932710283688 >10 0.5377409841757037 5.985868038253247 >50 0.06543924360367302 2.737795573014139 >100 0.08615001903640324 10.690237566513542 >500 0.014227570053221957 5.558403169951251 >1k 0.007505883413904495 6.6591973337737835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTATTGGAGCTGGAATTACCGCGGC 2586 0.16976390606659786 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2492 0.16359306029310205 No Hit CTTTAATATACGCTATTGGAGCTGG 2448 0.1607045792927423 No Hit GTCCTATTCCATTATTCCTAGCTGC 2406 0.157947392883308 No Hit GAATAGGACCGCGGTTCTATTTTGT 2373 0.15578103213303818 No Hit GAACTACGACGGTATCTGATCGTCT 2343 0.15381161326915654 No Hit GAATAACGCCGCCGCATCGCCAGTC 2328 0.1528269038372157 No Hit GTATCTGATCGTCTTCGAACCTCCG 2287 0.15013536472324412 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2189 0.14370192976789742 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2120 0.13917226638096963 No Hit CTCTTAATCATGGCCTCAGTTCCGA 2080 0.13654637456246077 No Hit ATACAGGACTCTTTCGAGGCCCTGT 2016 0.1323449476528466 No Hit CTCTAGATAACCTCGGGCCGATCGC 1983 0.1301785869025768 No Hit GCTTTGAACACTCTAATTTTTTCAA 1916 0.12578021810657444 No Hit ATATTAAAGTTGCTGCAGTTAAAAA 1900 0.1247298613791709 No Hit GTCCTGTATTGTTATTTTTCGTCAC 1875 0.12308867899260287 No Hit GTATCAACGCAGAGTACTTTTTTTT 1874 0.12302303169714016 No Hit GTACATGGGTACCTGGTTGATCCTG 1843 0.12098796553779577 No Hit CCATTATTCCTAGCTGCGGTATCCA 1739 0.11416064680967272 No Hit GCTAAGAGCATCGAGGGGGCGCCGA 1686 0.1106813401501485 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 1611 0.10575779299044438 No Hit CTTTAAATCCTTTAACGAGGATCCA 1605 0.10536390921766804 No Hit GTACATGGGAATAACGCCGCCGCAT 1579 0.10365707953563728 No Hit AGATAACCTCGGGCCGATCGCACGC 1575 0.10339449035378641 No Hit GAATAATGGAATAGGACCGCGGTTC 1573 0.10326319576286097 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.564729546272153E-5 0.0 5 0.0 0.0 0.0 6.564729546272153E-5 0.0 6 0.0 0.0 0.0 6.564729546272153E-5 0.0 7 0.0 0.0 0.0 6.564729546272153E-5 0.0 8 0.0 0.0 0.0 6.564729546272153E-5 0.0 9 0.0 0.0 0.0 6.564729546272153E-5 0.0 10 0.0 0.0 0.0 6.564729546272153E-5 0.0 11 0.0 0.0 0.0 6.564729546272153E-5 0.0 12 0.0 0.0 0.0 6.564729546272153E-5 6.564729546272153E-5 13 0.0 0.0 0.0 6.564729546272153E-5 6.564729546272153E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCCA 60 2.5681951E-5 14.249999 9 CGCATCG 370 0.0 14.121621 13 ATCGCCA 385 0.0 13.571427 16 GCATCGC 395 0.0 13.468355 14 CGCCAGT 390 0.0 13.397435 18 GGTATCA 635 0.0 13.3149605 1 CGTTATT 100 1.0069925E-8 13.299999 2 TCGCCAG 390 0.0 13.153846 17 CATCGCC 400 0.0 12.825 15 GACCATA 270 0.0 12.666666 11 GTATCAA 1845 0.0 12.563685 1 CCGCATC 435 0.0 12.229884 12 CCGACCA 280 0.0 12.214286 9 CGACCAT 260 0.0 12.0576935 10 GCTCGTA 215 0.0 11.930231 9 CGAGCCG 545 0.0 11.504587 15 ACGGTAT 410 0.0 11.35366 9 GCGTTAT 135 4.7257345E-9 11.259259 1 CGTCGTA 245 0.0 11.244898 10 CGGTTCT 460 0.0 11.152175 12 >>END_MODULE