##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920838_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 576952 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27947212246426 33.0 32.0 34.0 32.0 34.0 2 32.343255591453016 33.0 32.0 34.0 32.0 34.0 3 32.58131179023558 33.0 32.0 34.0 32.0 34.0 4 32.70186081337789 33.0 32.0 34.0 32.0 34.0 5 32.649345179495 33.0 32.0 34.0 32.0 34.0 6 35.717330037854104 37.0 37.0 37.0 33.0 37.0 7 35.741408297397356 37.0 37.0 37.0 33.0 37.0 8 35.61855405648997 37.0 35.0 37.0 33.0 37.0 9 35.66307942428486 37.0 35.0 37.0 33.0 37.0 10 35.54440230729766 37.0 35.0 37.0 33.0 37.0 11 35.49576394570086 37.0 34.0 37.0 33.0 37.0 12 35.558536932015144 37.0 34.0 37.0 33.0 37.0 13 37.07480518310015 38.0 38.0 38.0 36.0 38.0 14 37.06796232615538 38.0 38.0 38.0 36.0 38.0 15 37.02195503265436 38.0 38.0 38.0 36.0 38.0 16 37.086896310264976 38.0 38.0 38.0 36.0 38.0 17 37.064766219720184 38.0 38.0 38.0 36.0 38.0 18 37.064402237967805 38.0 38.0 38.0 36.0 38.0 19 37.10055602545793 38.0 38.0 38.0 36.0 38.0 20 37.096195177415105 38.0 38.0 38.0 36.0 38.0 21 37.04455136649149 38.0 38.0 38.0 36.0 38.0 22 37.10079348022019 38.0 38.0 38.0 36.0 38.0 23 37.66203081018872 39.0 38.0 39.0 36.0 39.0 24 37.567470084166445 39.0 38.0 39.0 36.0 39.0 25 37.24873992983819 39.0 38.0 39.0 35.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 3.0 22 18.0 23 64.0 24 180.0 25 458.0 26 976.0 27 1911.0 28 3358.0 29 5484.0 30 7852.0 31 10868.0 32 14933.0 33 21033.0 34 33602.0 35 81099.0 36 333041.0 37 62071.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.350779828685695 20.08303835754707 13.258041522647376 26.30814029111986 2 15.68544864595033 20.14400210768612 39.94290527892176 24.227643967441796 3 19.278206852563127 23.701105117930087 29.486335085067733 27.53435294443905 4 13.822987007584686 16.867261054645795 36.935654959164715 32.374096978604804 5 14.038602864709715 36.95194747569989 35.569856764514206 13.439592895076194 6 33.388915659309234 36.52746818460727 17.034191797158023 13.04942435892547 7 28.403122757511362 30.8608036385949 22.274087144625135 18.461986459268605 8 24.531503487291836 38.07214464981489 20.06995382631484 17.326398036578432 9 25.152699011356233 15.847245524757692 20.46288079424285 38.53717466964323 10 15.047352292738392 28.815048738889892 34.08533118872974 22.052267779641983 11 34.577746502308685 21.667487069981558 25.223242141460638 18.531524286249116 12 23.62969536460572 23.433665192251695 31.45270317114769 21.483936271994896 13 28.765824539996395 21.25670766372246 26.073052870949404 23.904414925331743 14 20.82783746916972 21.784247827797603 26.541167416877403 30.846747286155274 15 22.710680486705723 31.421638298609906 22.405449440149756 23.462231774534615 16 22.734993552323242 27.4783690844299 27.225315104202775 22.561322259044083 17 21.982937922045508 28.61693867080797 27.72449007889738 21.675633328249145 18 22.457674121937355 27.00709937741788 29.22530817121702 21.309918329427752 19 24.294568698955892 26.345865860591523 26.23095162162537 23.128613818827215 20 23.869923321177495 27.306951011522624 26.86306659826121 21.960059069038675 21 22.846961272341545 26.58574716787532 26.30773443891346 24.259557120869673 22 23.635935051789403 27.654640247368935 26.325933526532534 22.38349117430913 23 22.406543351959954 27.524300115087563 27.145239118678848 22.92391741427363 24 24.08553917830253 26.470659604265173 27.207982639803657 22.235818577628642 25 23.387907486238024 27.025125140392962 27.150785507286567 22.436181866082446 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.0 2 13.5 3 25.0 4 25.0 5 25.0 6 63.5 7 102.0 8 102.0 9 102.0 10 409.0 11 716.0 12 716.0 13 716.0 14 1379.5 15 2043.0 16 2043.0 17 2043.0 18 3873.5 19 5704.0 20 5704.0 21 5704.0 22 9629.5 23 13555.0 24 13555.0 25 13555.0 26 19475.0 27 25395.0 28 25395.0 29 25395.0 30 33408.0 31 41421.0 32 41421.0 33 41421.0 34 47207.5 35 52994.0 36 52994.0 37 52994.0 38 57764.0 39 62534.0 40 62534.0 41 62534.0 42 66247.0 43 69960.0 44 69960.0 45 69960.0 46 71784.5 47 73609.0 48 73609.0 49 73609.0 50 70796.5 51 67984.0 52 67984.0 53 67984.0 54 62289.0 55 56594.0 56 56594.0 57 56594.0 58 50054.5 59 43515.0 60 43515.0 61 43515.0 62 36635.5 63 29756.0 64 29756.0 65 29756.0 66 23371.5 67 16987.0 68 16987.0 69 16987.0 70 12685.0 71 8383.0 72 8383.0 73 8383.0 74 5924.5 75 3466.0 76 3466.0 77 3466.0 78 2457.0 79 1448.0 80 1448.0 81 1448.0 82 957.5 83 467.0 84 467.0 85 467.0 86 338.5 87 210.0 88 210.0 89 210.0 90 142.0 91 74.0 92 74.0 93 74.0 94 41.0 95 8.0 96 8.0 97 8.0 98 4.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.060836950040904614 2 0.0027731943038588995 3 0.0 4 0.0 5 0.0 6 0.005199739319735437 7 0.004506440743770712 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 5.199739319735438E-4 15 0.002079895727894175 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 576952.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 93.58953749765165 #Duplication Level Percentage of deduplicated Percentage of total 1 95.8163146098563 89.67404569065933 2 3.0725363189404766 5.751145060687525 3 0.6113842209467529 1.7165749941530601 4 0.22769277597553286 0.8523864638042611 5 0.09800692661671474 0.45862114668123083 6 0.0600364661488938 0.3371271059921034 7 0.03641732379199216 0.23857963434163404 8 0.018981489162804746 0.14211750334108667 9 0.015137957544428784 0.12750790007179585 >10 0.04308718262826276 0.6024638508555129 >50 0.0 0.0 >100 4.047283878751291E-4 0.09943064941251585 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 1.7332464399118125E-4 0.0 0.0 0.0 0.0 13 1.7332464399118125E-4 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCT 35 0.0021679094 16.285788 8 GGATAGC 40 0.00524638 14.26119 1 GTGCTAT 60 2.5438363E-5 14.26119 1 CCGTGCA 40 0.005273619 14.250066 9 CGCAGAG 75 9.641899E-7 13.933397 2 GGTTGAG 50 0.0014975036 13.300059 7 AGTCGTC 80 1.9930922E-6 13.06256 8 ACGCAGA 75 1.4629119E-5 12.676614 1 GTGTAGT 60 4.058129E-4 12.676614 1 CGAAATC 75 1.4747013E-5 12.666724 13 TAGAAGT 60 4.0849412E-4 12.666724 4 AAGTCGT 90 5.3849544E-7 12.666724 7 CAAGTCG 85 3.9309834E-6 12.294174 6 GTCATAA 55 0.0030464588 12.100403 1 GTATTAC 55 0.0030464588 12.100403 1 TTTAGAA 300 0.0 12.033388 2 CGTCAAG 80 2.8589122E-5 11.875054 11 GTAGAAC 250 0.0 11.780053 3 TGTAGAA 250 0.0 11.780053 2 AGGACTT 90 7.4373493E-6 11.611163 5 >>END_MODULE