FastQCFastQC Report
Mon 15 Aug 2016
SRR2920837_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920837_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87955
Sequences flagged as poor quality0
Sequence length25
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGATG307.643856E-419.08
TTTAGAA456.6730514E-414.7777782
GAATATG701.0685205E-412.21428613
AATATGG802.7950571E-511.87500114
ATATGGC752.0317493E-411.40000115
GGAATAT752.0317493E-411.40000112
GTAGGAC600.00580131811.0833343
TGGAATA856.462229E-410.05882411
Produced by FastQC (version 0.11.5)