##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920837_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 87955 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.242828719231426 33.0 32.0 34.0 32.0 34.0 2 32.42044227161617 33.0 32.0 34.0 32.0 34.0 3 32.668091637769315 33.0 32.0 34.0 32.0 34.0 4 32.57709055767154 33.0 32.0 34.0 32.0 34.0 5 32.477903473367064 33.0 32.0 34.0 32.0 34.0 6 35.501085782502415 37.0 35.0 37.0 33.0 37.0 7 35.354681371155706 37.0 35.0 37.0 33.0 37.0 8 35.36765391393326 37.0 34.0 37.0 33.0 37.0 9 35.44206696606219 37.0 34.0 37.0 33.0 37.0 10 35.46818259337161 37.0 34.0 37.0 33.0 37.0 11 35.37041669035302 37.0 34.0 37.0 33.0 37.0 12 35.34921266556762 37.0 34.0 37.0 33.0 37.0 13 37.055903587061565 38.0 38.0 38.0 36.0 38.0 14 37.097583991814 38.0 38.0 38.0 36.0 38.0 15 37.10755499971577 38.0 38.0 38.0 36.0 38.0 16 37.073821840714004 38.0 38.0 38.0 36.0 38.0 17 36.94150417827298 38.0 38.0 38.0 36.0 38.0 18 37.01254050366665 38.0 38.0 38.0 36.0 38.0 19 37.003285771132965 38.0 38.0 38.0 36.0 38.0 20 37.02919674833722 38.0 38.0 38.0 36.0 38.0 21 37.03136831334205 38.0 38.0 38.0 36.0 38.0 22 37.05530100619635 38.0 38.0 38.0 36.0 38.0 23 37.60947075208914 39.0 38.0 39.0 36.0 39.0 24 37.58062645671082 39.0 38.0 39.0 36.0 39.0 25 37.40057984196464 39.0 38.0 39.0 35.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 1.0 21 1.0 22 3.0 23 6.0 24 28.0 25 83.0 26 176.0 27 279.0 28 495.0 29 756.0 30 1220.0 31 1671.0 32 2333.0 33 3570.0 34 5982.0 35 14538.0 36 48095.0 37 8716.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.79347393553522 17.70678187709624 11.579785117389573 27.919959069978965 2 17.259962480814053 20.241032346086065 37.01893013472798 25.480075038371897 3 19.40992553010062 23.513160138707292 29.490080154624525 27.586834176567564 4 13.87982491046558 17.297481666761414 35.16229890284805 33.660394519924964 5 14.142459212097094 35.17707918822125 33.6080950486044 17.072366551077256 6 32.606446478312776 34.65067363992951 18.19794212949804 14.54493775225968 7 28.233755897902334 30.15291910636121 22.362571769654938 19.250753226081518 8 25.932579159797626 34.46876243533625 20.84588710135865 18.752771303507476 9 25.790461031209137 16.40043203911091 20.218293445511907 37.59081348416804 10 15.967255983173215 27.416292422261385 33.10897618100165 23.507475413563757 11 34.746177022340966 21.43596157125803 24.90478085384572 18.913080552555282 12 24.298789153544426 22.948098459439485 30.290489454834855 22.46262293218123 13 27.93019157523734 21.3882098800523 25.809789096697173 24.871809448013188 14 23.26075834233415 20.358137684042976 25.741572394974703 30.63953157864817 15 24.05093513728611 28.14734807572054 22.713887783525667 25.087829003467682 16 24.54209538968791 26.474901938491275 24.729691319424706 24.25331135239611 17 23.77010971519527 26.03490421238133 25.943948610084703 24.251037462338694 18 23.571144335171397 26.32255130464442 26.81257461201751 23.293729748166676 19 24.97299755556819 25.290205218577682 26.10880563924734 23.627991586606786 20 24.634187937013248 25.939400829969873 25.646069012563245 23.78034222045364 21 24.087317378204766 25.389119436075262 25.843897447558412 24.67966573816156 22 24.37610141549656 25.299300778807343 26.0451367176397 24.279461088056394 23 24.08959126826218 25.691546813711557 25.827980217156497 24.390881700869762 24 23.886078108123474 26.059917003012906 26.06219089307032 23.991813995793304 25 24.504576203740548 25.485759763515436 26.05650616792678 23.953157864817236 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 2.0 3 4.0 4 4.0 5 4.0 6 7.5 7 11.0 8 11.0 9 11.0 10 54.5 11 98.0 12 98.0 13 98.0 14 133.0 15 168.0 16 168.0 17 168.0 18 340.0 19 512.0 20 512.0 21 512.0 22 898.0 23 1284.0 24 1284.0 25 1284.0 26 1941.0 27 2598.0 28 2598.0 29 2598.0 30 3479.5 31 4361.0 32 4361.0 33 4361.0 34 5312.0 35 6263.0 36 6263.0 37 6263.0 38 7363.5 39 8464.0 40 8464.0 41 8464.0 42 9526.5 43 10589.0 44 10589.0 45 10589.0 46 11227.5 47 11866.0 48 11866.0 49 11866.0 50 11974.5 51 12083.0 52 12083.0 53 12083.0 54 11436.0 55 10789.0 56 10789.0 57 10789.0 58 9524.5 59 8260.0 60 8260.0 61 8260.0 62 6955.0 63 5650.0 64 5650.0 65 5650.0 66 4361.0 67 3072.0 68 3072.0 69 3072.0 70 2170.5 71 1269.0 72 1269.0 73 1269.0 74 858.0 75 447.0 76 447.0 77 447.0 78 295.0 79 143.0 80 143.0 81 143.0 82 81.5 83 20.0 84 20.0 85 20.0 86 11.5 87 3.0 88 3.0 89 3.0 90 2.0 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 87955.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 74.93945767722131 #Duplication Level Percentage of deduplicated Percentage of total 1 85.92538649431827 64.39201864589847 2 7.855809931273042 11.774202717298618 3 2.773352752871209 6.235006537433915 4 1.2334440853852806 3.6973452333579675 5 0.7145783077693323 2.677505542607015 6 0.43238814801329023 1.9441759990904441 7 0.2639843429975877 1.3847990449661758 8 0.18509247037761897 1.1096583480188733 9 0.1350264742918696 0.9106929679949974 >10 0.4763855385128882 5.681314308453186 >50 0.004551454189613582 0.19328065488033655 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGGATG 30 7.643856E-4 19.0 8 TTTAGAA 45 6.6730514E-4 14.777778 2 GAATATG 70 1.0685205E-4 12.214286 13 AATATGG 80 2.7950571E-5 11.875001 14 ATATGGC 75 2.0317493E-4 11.400001 15 GGAATAT 75 2.0317493E-4 11.400001 12 GTAGGAC 60 0.005801318 11.083334 3 TGGAATA 85 6.462229E-4 10.058824 11 >>END_MODULE