##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920833_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 90888 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.05623404629874 33.0 33.0 34.0 32.0 34.0 2 33.11570284305959 33.0 33.0 34.0 32.0 35.0 3 33.27406258251914 34.0 33.0 34.0 32.0 35.0 4 33.356284658040664 34.0 33.0 34.0 32.0 35.0 5 33.25873602675821 34.0 33.0 34.0 32.0 35.0 6 36.04342707508142 37.0 37.0 37.0 33.0 37.0 7 36.048653287562715 37.0 37.0 37.0 34.0 37.0 8 36.01103556024998 37.0 37.0 37.0 33.0 37.0 9 35.994971833465364 37.0 37.0 37.0 33.0 37.0 10 35.98702799049379 37.0 37.0 37.0 33.0 37.0 11 35.89188891822903 37.0 35.0 37.0 33.0 37.0 12 35.863271278936715 37.0 35.0 37.0 33.0 37.0 13 37.527759440190124 38.0 38.0 38.0 37.0 38.0 14 37.546100695361325 38.0 38.0 38.0 37.0 38.0 15 37.54193072792888 38.0 38.0 38.0 37.0 38.0 16 37.51907842619488 38.0 38.0 38.0 37.0 38.0 17 37.45604480239415 38.0 38.0 38.0 37.0 38.0 18 37.504511046562804 38.0 38.0 38.0 37.0 38.0 19 37.49511486664906 38.0 38.0 38.0 37.0 38.0 20 37.486884957310096 38.0 38.0 38.0 37.0 38.0 21 37.47846800457706 38.0 38.0 38.0 37.0 38.0 22 37.48985564650999 38.0 38.0 38.0 37.0 38.0 23 38.19197253762873 39.0 38.0 39.0 37.0 39.0 24 38.187252442566674 39.0 38.0 39.0 37.0 39.0 25 38.05762036792536 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 22 2.0 23 4.0 24 14.0 25 29.0 26 65.0 27 140.0 28 249.0 29 393.0 30 619.0 31 858.0 32 1197.0 33 1731.0 34 2908.0 35 7960.0 36 54084.0 37 20635.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.03098318809964 18.077193908986885 11.804638676172873 27.0871842267406 2 17.15407974650119 20.898248393627323 37.21283337734354 24.734838482527945 3 19.23356218642725 23.54436229205176 29.97205351641581 27.250022005105183 4 13.440718246633217 17.40493794560338 36.510870521961095 32.6434732858023 5 14.027154299797553 35.34570020244697 34.282853622040314 16.344291875715168 6 31.632338702579 35.21476982659977 18.972801689992078 14.180089780829153 7 27.61640700642549 30.5287826775812 23.065751254290994 18.789059061702314 8 25.31247249361852 34.59422586039961 21.801557961447056 18.29174368453481 9 25.629346008273917 16.70187483496171 20.421837866385 37.24694129037937 10 15.289147082123053 27.89697209752663 33.88126045242496 22.932620367925356 11 34.497403397588236 21.97209752662618 25.100123228589034 18.43037584719655 12 23.55316433412552 23.727004665082298 31.17573277000264 21.544098230789544 13 28.02350145233694 21.737743156412286 26.138764193292847 24.099991197957927 14 22.527726432532347 21.152407358507176 26.50624944987237 29.813616759088106 15 23.850233254114954 28.545022445207284 23.290203327171906 24.314540973505853 16 23.96245929055541 27.26872634451193 25.224452072880908 23.54436229205176 17 23.01513951236687 26.752706627937684 26.81982219875011 23.41233166094534 18 23.089956869993838 26.65918493090397 27.351245488953435 22.89961271014875 19 24.350849397060117 25.9891294780389 26.315905290027285 23.34411583487369 20 23.94705571692633 26.59426987060998 26.66248569668163 22.796188715782062 21 23.721503388786196 26.581066807499337 26.275195845436137 23.422233958278323 22 23.520156676348915 26.551359915500395 26.56016195757416 23.368321450576534 23 23.819426106856792 25.991329988557343 26.25759176128862 23.931652143297242 24 23.326511750726166 26.479843323651085 26.796716838306487 23.396928087316258 25 24.182510342399436 25.816389402341343 26.40062494498724 23.600475310271985 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 1.0 3 2.0 4 2.0 5 2.0 6 7.0 7 12.0 8 12.0 9 12.0 10 72.0 11 132.0 12 132.0 13 132.0 14 178.5 15 225.0 16 225.0 17 225.0 18 443.5 19 662.0 20 662.0 21 662.0 22 1181.5 23 1701.0 24 1701.0 25 1701.0 26 2471.5 27 3242.0 28 3242.0 29 3242.0 30 4340.0 31 5438.0 32 5438.0 33 5438.0 34 6308.5 35 7179.0 36 7179.0 37 7179.0 38 8326.5 39 9474.0 40 9474.0 41 9474.0 42 10290.0 43 11106.0 44 11106.0 45 11106.0 46 11622.0 47 12138.0 48 12138.0 49 12138.0 50 12000.5 51 11863.0 52 11863.0 53 11863.0 54 11014.5 55 10166.0 56 10166.0 57 10166.0 58 9029.0 59 7892.0 60 7892.0 61 7892.0 62 6533.5 63 5175.0 64 5175.0 65 5175.0 66 4019.0 67 2863.0 68 2863.0 69 2863.0 70 1970.5 71 1078.0 72 1078.0 73 1078.0 74 735.5 75 393.0 76 393.0 77 393.0 78 254.5 79 116.0 80 116.0 81 116.0 82 71.0 83 26.0 84 26.0 85 26.0 86 15.0 87 4.0 88 4.0 89 4.0 90 2.5 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 90888.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.33870257899832 #Duplication Level Percentage of deduplicated Percentage of total 1 90.48051739804373 74.50048411231406 2 5.550804425677482 9.140920693600915 3 1.9014912608904804 4.696989701610773 4 0.7603292533005506 2.5041809699850366 5 0.40622160457533807 1.6723879940146114 6 0.25255224758137795 1.2476894639556377 7 0.18440322839275214 1.0628465804066543 8 0.11892671976054306 0.7833817445647391 9 0.07349404030145919 0.5446263533139688 >10 0.2672510556416698 3.6352433764633396 >50 0.004008765834625046 0.2112490097702667 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGATAAA 35 9.8092336E-5 19.0 1 CCCCCCT 35 9.8092336E-5 19.0 16 TCCCCCC 35 9.8092336E-5 19.0 15 GGGCATC 45 3.4800927E-5 16.88889 10 CATCCCC 45 3.4800927E-5 16.88889 13 GCATCCC 45 3.4800927E-5 16.88889 12 CCCCTGA 40 2.7253936E-4 16.625 18 GCATTTC 35 0.002149123 16.285715 13 GATAAAG 50 8.570951E-5 15.200001 2 GTGCATT 40 0.0052286536 14.25 11 AGTGTGC 40 0.0052286536 14.25 8 GTGTGCA 40 0.0052286536 14.25 9 ATCCCCC 55 1.9283855E-4 13.818182 14 GGCATCC 55 1.9283855E-4 13.818182 11 GAGGGCA 55 1.9283855E-4 13.818182 8 CCCTGAC 50 0.0014806837 13.300001 19 AGGGCAT 60 4.0265362E-4 12.666667 9 CCCCCTG 55 0.0030303902 12.090909 17 TTTCTCA 60 0.0058038225 11.083334 16 ATAAAGA 60 0.0058038225 11.083334 3 >>END_MODULE