FastQCFastQC Report
Mon 15 Aug 2016
SRR2920830_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920830_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122061
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGACAC551.1114154E-515.54545519
GAGCCCA508.6095875E-515.212
ACTCATT400.00524231414.25000114
ATTGATA400.00524231414.25000118
GGAGCCC500.001485787413.29999911
GTGGAGC500.001485787413.2999999
TCATTGA550.003040687412.09090916
CCAGGAC550.003040687412.0909093
AGCCCAG657.930894E-411.69230713
GAGGTGG657.930894E-411.6923076
GGTGGAG657.930894E-411.6923078
CACAGTG657.930894E-411.6923077
CAGTGAC657.930894E-411.69230717
CCAGTGA657.930894E-411.69230716
GCCCAGT700.001474420510.85714214
AGGTGGA750.002617806410.1333347
AGTGACA800.00446533469.50000118
CCCAGTG850.00735331148.94117615
TTCTCAT1900.0033202086.017
Produced by FastQC (version 0.11.5)