FastQCFastQC Report
Mon 15 Aug 2016
SRR2920829_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920829_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92026
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCACTG400.005229321314.255
GAATATG1002.6921288E-49.50000113
GGAATAT1054.3902814E-49.0476212
TGGAATA1000.0028513748.5511
ATATGGC1250.00247031647.615
AATATGG1250.00247031647.614
Produced by FastQC (version 0.11.5)